[Debian-med-packaging] [biopython] Building Debian jessie packages for 1.65 fails during tests (#540)

Andreas Tille andreas at an3as.eu
Mon May 11 10:05:34 UTC 2015


Hi Peter,

On Mon, May 11, 2015 at 02:52:23AM -0700, Peter Cock wrote:
> Yes, I'm probably the best person to fix issue #541 in ``test_SeqIO_index.py`` when run from under ``$TMPDIR``.

:-)

> It looks like a mistake in the tests though, rather than the indexing itself

This is what was to be expected considering the issue which was just
cause by the location of the files.

> - so skipping the test is not unreasonable. Alternatively, I would expect this to be a small commit, which ought to be easy to back-port to Biopython 1.65 if that's what you'd prefer to do for the Debian package.

I'd prefer a simple patch if you don't mind.

Kind regards and thanks a lot for your cooperation

     Andreas.

-- 
http://fam-tille.de



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