[Debian-med-packaging] Bug#1063136: libslow5lib: NMU diff for 64-bit time_t transition
Benjamin Drung
bdrung at debian.org
Fri Mar 1 12:29:26 GMT 2024
Source: libslow5lib
Dear maintainer,
Please find attached a final version of this patch for the time_t
transition. This patch is being uploaded to unstable.
Note that this adds a versioned build-dependency on dpkg-dev, to guard
against accidental backports with a wrong ABI.
Thanks!
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 6.5.0-21-generic (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=C, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: unable to detect
-------------- next part --------------
diff -Nru libslow5lib-0.7.0+dfsg/debian/changelog libslow5lib-0.7.0+dfsg/debian/changelog
--- libslow5lib-0.7.0+dfsg/debian/changelog 2023-01-14 21:58:31.000000000 +0000
+++ libslow5lib-0.7.0+dfsg/debian/changelog 2024-03-01 12:28:36.000000000 +0000
@@ -1,3 +1,10 @@
+libslow5lib (0.7.0+dfsg-2.1) unstable; urgency=medium
+
+ * Non-maintainer upload.
+ * Rename libraries for 64-bit time_t transition. Closes: #1063136
+
+ -- Benjamin Drung <bdrung at debian.org> Fri, 01 Mar 2024 12:28:36 +0000
+
libslow5lib (0.7.0+dfsg-2) unstable; urgency=medium
* Team Upload.
diff -Nru libslow5lib-0.7.0+dfsg/debian/control libslow5lib-0.7.0+dfsg/debian/control
--- libslow5lib-0.7.0+dfsg/debian/control 2023-01-14 21:58:26.000000000 +0000
+++ libslow5lib-0.7.0+dfsg/debian/control 2024-03-01 12:28:36.000000000 +0000
@@ -3,9 +3,9 @@
Uploaders: Andreas Tille <tille at debian.org>
Section: science
Priority: optional
-Build-Depends: debhelper-compat (= 13),
+Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13),
cmake,
- d-shlibs,
+ d-shlibs (>= 0.106~),
dh-python,
python3-all-dev,
libstreamvbyte-dev,
@@ -21,7 +21,10 @@
Homepage: https://github.com/hasindu2008/slow5lib
Rules-Requires-Root: no
-Package: libslow5-0
+Package: libslow5-0t64
+Provides: ${t64:Provides}
+Replaces: libslow5-0
+Conflicts: libslow5-0 (<< ${source:Version})
Architecture: any
Section: libs
Depends: ${shlibs:Depends},
@@ -49,7 +52,7 @@
Package: libslow5-dev
Architecture: any
Section: libdevel
-Depends: libslow5-0 (= ${binary:Version}),
+Depends: libslow5-0t64 (= ${binary:Version}),
${shlibs:Depends},
${misc:Depends}
Multi-Arch: same
@@ -77,7 +80,7 @@
Package: python3-slow5
Architecture: any
Section: python
-Depends: libslow5-0 (= ${binary:Version}),
+Depends: libslow5-0t64 (= ${binary:Version}),
${shlibs:Depends},
${python3:Depends},
${misc:Depends}
diff -Nru libslow5lib-0.7.0+dfsg/debian/libslow5-0.symbols libslow5lib-0.7.0+dfsg/debian/libslow5-0.symbols
--- libslow5lib-0.7.0+dfsg/debian/libslow5-0.symbols 2023-01-14 20:35:31.000000000 +0000
+++ libslow5lib-0.7.0+dfsg/debian/libslow5-0.symbols 1970-01-01 00:00:00.000000000 +0000
@@ -1,155 +0,0 @@
-libslow5.so.0 libslow5-0 #MINVER#
- __slow5_press_free at Base 0.5.1
- __slow5_press_init at Base 0.5.1
- ks_combsort_str_slow5 at Base 0.5.1
- ks_heapadjust_str_slow5 at Base 0.5.1
- ks_heapmake_str_slow5 at Base 0.5.1
- ks_heapsort_str_slow5 at Base 0.5.1
- ks_introsort_str_slow5 at Base 0.5.1
- ks_ksmall_str_slow5 at Base 0.5.1
- ks_mergesort_str_slow5 at Base 0.5.1
- ks_shuffle_str_slow5 at Base 0.5.1
- slow5_add_rec at Base 0.5.1
- slow5_asprintf at Base 0.5.1
- slow5_ato_int16 at Base 0.5.1
- slow5_ato_int32 at Base 0.5.1
- slow5_ato_int64 at Base 0.5.1
- slow5_ato_int8 at Base 0.5.1
- slow5_ato_uint16 at Base 0.5.1
- slow5_ato_uint32 at Base 0.5.1
- slow5_ato_uint64 at Base 0.5.1
- slow5_ato_uint8 at Base 0.5.1
- slow5_aux_add at Base 0.6.0
- slow5_aux_get_char at Base 0.5.1
- slow5_aux_get_double at Base 0.5.1
- slow5_aux_get_double_array at Base 0.5.1
- slow5_aux_get_enum at Base 0.5.1
- slow5_aux_get_enum_array at Base 0.5.1
- slow5_aux_get_float at Base 0.5.1
- slow5_aux_get_float_array at Base 0.5.1
- slow5_aux_get_int16 at Base 0.5.1
- slow5_aux_get_int16_array at Base 0.5.1
- slow5_aux_get_int32 at Base 0.5.1
- slow5_aux_get_int32_array at Base 0.5.1
- slow5_aux_get_int64 at Base 0.5.1
- slow5_aux_get_int64_array at Base 0.5.1
- slow5_aux_get_int8 at Base 0.5.1
- slow5_aux_get_int8_array at Base 0.5.1
- slow5_aux_get_string at Base 0.5.1
- slow5_aux_get_uint16 at Base 0.5.1
- slow5_aux_get_uint16_array at Base 0.5.1
- slow5_aux_get_uint32 at Base 0.5.1
- slow5_aux_get_uint32_array at Base 0.5.1
- slow5_aux_get_uint64 at Base 0.5.1
- slow5_aux_get_uint64_array at Base 0.5.1
- slow5_aux_get_uint8 at Base 0.5.1
- slow5_aux_get_uint8_array at Base 0.5.1
- slow5_aux_meta_add at Base 0.5.1
- slow5_aux_meta_add_enum at Base 0.5.1
- slow5_aux_meta_enum_parse at Base 0.5.1
- slow5_aux_meta_free at Base 0.5.1
- slow5_aux_meta_init at Base 0.5.1
- slow5_aux_meta_init_empty at Base 0.5.1
- slow5_aux_set at Base 0.6.0
- slow5_aux_set_string at Base 0.6.0
- slow5_close at Base 0.5.1
- slow5_compress_footer_next at Base 0.5.1
- slow5_convert at Base 0.5.1
- slow5_data_to_str at Base 0.5.1
- slow5_decode at Base 0.7.0
- slow5_decode_record_press at Base 0.5.1
- slow5_decode_signal_press at Base 0.5.1
- slow5_double_to_str at Base 0.5.1
- slow5_encode at Base 0.6.0
- slow5_encode_record_press at Base 0.5.1
- slow5_encode_signal_press at Base 0.5.1
- slow5_eof_fwrite at Base 0.5.1
- slow5_errno_intern at Base 0.5.1
- slow5_errno_location at Base 0.5.1
- slow5_exit_condition at Base 0.5.1
- slow5_filestamps_cmp at Base 0.5.1
- slow5_float_check at Base 0.5.1
- slow5_fmt_get_name at Base 0.5.1
- slow5_fprintf_compress at Base 0.5.1
- slow5_fread_depress at Base 0.5.1
- slow5_fwrite_compress at Base 0.5.1
- slow5_get at Base 0.5.1
- slow5_get_aux_enum_labels at Base 0.5.1
- slow5_get_aux_names at Base 0.5.1
- slow5_get_aux_types at Base 0.5.1
- slow5_get_hdr_keys at Base 0.5.1
- slow5_get_idx_path at Base 0.5.1
- slow5_get_mem at Base 0.5.1
- slow5_get_next at Base 0.5.1
- slow5_get_next_bytes at Base 0.6.0
- slow5_get_next_mem at Base 0.5.1
- slow5_get_rids at Base 0.5.1
- slow5_hdr_add at Base 0.6.0
- slow5_hdr_add_attr at Base 0.5.1
- slow5_hdr_add_rg at Base 0.5.1
- slow5_hdr_add_rg_data at Base 0.5.1
- slow5_hdr_attrs_to_str at Base 0.5.1
- slow5_hdr_data_free at Base 0.5.1
- slow5_hdr_data_init at Base 0.5.1
- slow5_hdr_free at Base 0.5.1
- slow5_hdr_fwrite at Base 0.5.1
- slow5_hdr_get at Base 0.5.1
- slow5_hdr_get_data at Base 0.5.1
- slow5_hdr_init at Base 0.5.1
- slow5_hdr_init_empty at Base 0.5.1
- slow5_hdr_set at Base 0.5.1
- slow5_hdr_to_mem at Base 0.5.1
- slow5_hdr_types_to_str at Base 0.5.1
- slow5_hdr_write at Base 0.6.0
- slow5_idx_create at Base 0.5.1
- slow5_idx_free at Base 0.5.1
- slow5_idx_get at Base 0.5.1
- slow5_idx_init at Base 0.5.1
- slow5_idx_insert at Base 0.5.1
- slow5_idx_load at Base 0.5.1
- slow5_idx_to at Base 0.5.1
- slow5_idx_unload at Base 0.5.1
- slow5_idx_write at Base 0.5.1
- slow5_init at Base 0.5.1
- slow5_init_empty at Base 0.5.1
- slow5_int_check at Base 0.5.1
- slow5_is_c_label at Base 0.5.1
- slow5_is_eof at Base 0.5.1
- slow5_log_level at Base 0.5.1
- slow5_memcpy_null_type at Base 0.5.1
- slow5_memcpy_type_from_str at Base 0.5.1
- slow5_name_get_fmt at Base 0.5.1
- slow5_open at Base 0.5.1
- slow5_open_with at Base 0.5.1
- slow5_path_get_fmt at Base 0.5.1
- slow5_pread_depress at Base 0.5.1
- slow5_pread_depress_solo at Base 0.5.1
- slow5_press_free at Base 0.5.1
- slow5_press_init at Base 0.5.1
- slow5_printf_compress at Base 0.5.1
- slow5_ptr_compress at Base 0.5.1
- slow5_ptr_compress_solo at Base 0.5.1
- slow5_ptr_depress at Base 0.5.1
- slow5_ptr_depress_solo at Base 0.5.1
- slow5_rec_aux_free at Base 0.5.1
- slow5_rec_depress_parse at Base 0.5.1
- slow5_rec_free at Base 0.5.1
- slow5_rec_fwrite at Base 0.5.1
- slow5_rec_parse at Base 0.5.1
- slow5_rec_rm at Base 0.5.1
- slow5_rec_set at Base 0.5.1
- slow5_rec_set_array at Base 0.5.1
- slow5_rec_to_mem at Base 0.5.1
- slow5_set_exit_condition at Base 0.5.1
- slow5_set_log_level at Base 0.5.1
- slow5_set_press at Base 0.6.0
- slow5_signal_press_version_cmp at Base 0.5.1
- slow5_str_to_aux_type at Base 0.5.1
- slow5_strsep at Base 0.5.1
- slow5_strtod_check at Base 0.5.1
- slow5_strtof_check at Base 0.5.1
- slow5_uint_check at Base 0.5.1
- slow5_vasprintf at Base 0.5.1
- slow5_version_cmp at Base 0.5.1
- slow5_write at Base 0.6.0
- slow5_write_bytes at Base 0.6.0
diff -Nru libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.lintian-overrides libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.lintian-overrides
--- libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.lintian-overrides 1970-01-01 00:00:00.000000000 +0000
+++ libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.lintian-overrides 2024-03-01 12:27:20.000000000 +0000
@@ -0,0 +1 @@
+libslow5-0t64: package-name-doesnt-match-sonames libslow5-0
diff -Nru libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.symbols libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.symbols
--- libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.symbols 1970-01-01 00:00:00.000000000 +0000
+++ libslow5lib-0.7.0+dfsg/debian/libslow5-0t64.symbols 2024-03-01 12:27:20.000000000 +0000
@@ -0,0 +1,155 @@
+libslow5.so.0 libslow5-0t64 #MINVER#
+ __slow5_press_free at Base 0.5.1
+ __slow5_press_init at Base 0.5.1
+ ks_combsort_str_slow5 at Base 0.5.1
+ ks_heapadjust_str_slow5 at Base 0.5.1
+ ks_heapmake_str_slow5 at Base 0.5.1
+ ks_heapsort_str_slow5 at Base 0.5.1
+ ks_introsort_str_slow5 at Base 0.5.1
+ ks_ksmall_str_slow5 at Base 0.5.1
+ ks_mergesort_str_slow5 at Base 0.5.1
+ ks_shuffle_str_slow5 at Base 0.5.1
+ slow5_add_rec at Base 0.5.1
+ slow5_asprintf at Base 0.5.1
+ slow5_ato_int16 at Base 0.5.1
+ slow5_ato_int32 at Base 0.5.1
+ slow5_ato_int64 at Base 0.5.1
+ slow5_ato_int8 at Base 0.5.1
+ slow5_ato_uint16 at Base 0.5.1
+ slow5_ato_uint32 at Base 0.5.1
+ slow5_ato_uint64 at Base 0.5.1
+ slow5_ato_uint8 at Base 0.5.1
+ slow5_aux_add at Base 0.6.0
+ slow5_aux_get_char at Base 0.5.1
+ slow5_aux_get_double at Base 0.5.1
+ slow5_aux_get_double_array at Base 0.5.1
+ slow5_aux_get_enum at Base 0.5.1
+ slow5_aux_get_enum_array at Base 0.5.1
+ slow5_aux_get_float at Base 0.5.1
+ slow5_aux_get_float_array at Base 0.5.1
+ slow5_aux_get_int16 at Base 0.5.1
+ slow5_aux_get_int16_array at Base 0.5.1
+ slow5_aux_get_int32 at Base 0.5.1
+ slow5_aux_get_int32_array at Base 0.5.1
+ slow5_aux_get_int64 at Base 0.5.1
+ slow5_aux_get_int64_array at Base 0.5.1
+ slow5_aux_get_int8 at Base 0.5.1
+ slow5_aux_get_int8_array at Base 0.5.1
+ slow5_aux_get_string at Base 0.5.1
+ slow5_aux_get_uint16 at Base 0.5.1
+ slow5_aux_get_uint16_array at Base 0.5.1
+ slow5_aux_get_uint32 at Base 0.5.1
+ slow5_aux_get_uint32_array at Base 0.5.1
+ slow5_aux_get_uint64 at Base 0.5.1
+ slow5_aux_get_uint64_array at Base 0.5.1
+ slow5_aux_get_uint8 at Base 0.5.1
+ slow5_aux_get_uint8_array at Base 0.5.1
+ slow5_aux_meta_add at Base 0.5.1
+ slow5_aux_meta_add_enum at Base 0.5.1
+ slow5_aux_meta_enum_parse at Base 0.5.1
+ slow5_aux_meta_free at Base 0.5.1
+ slow5_aux_meta_init at Base 0.5.1
+ slow5_aux_meta_init_empty at Base 0.5.1
+ slow5_aux_set at Base 0.6.0
+ slow5_aux_set_string at Base 0.6.0
+ slow5_close at Base 0.5.1
+ slow5_compress_footer_next at Base 0.5.1
+ slow5_convert at Base 0.5.1
+ slow5_data_to_str at Base 0.5.1
+ slow5_decode at Base 0.7.0
+ slow5_decode_record_press at Base 0.5.1
+ slow5_decode_signal_press at Base 0.5.1
+ slow5_double_to_str at Base 0.5.1
+ slow5_encode at Base 0.6.0
+ slow5_encode_record_press at Base 0.5.1
+ slow5_encode_signal_press at Base 0.5.1
+ slow5_eof_fwrite at Base 0.5.1
+ slow5_errno_intern at Base 0.5.1
+ slow5_errno_location at Base 0.5.1
+ slow5_exit_condition at Base 0.5.1
+ slow5_filestamps_cmp at Base 0.5.1
+ slow5_float_check at Base 0.5.1
+ slow5_fmt_get_name at Base 0.5.1
+ slow5_fprintf_compress at Base 0.5.1
+ slow5_fread_depress at Base 0.5.1
+ slow5_fwrite_compress at Base 0.5.1
+ slow5_get at Base 0.5.1
+ slow5_get_aux_enum_labels at Base 0.5.1
+ slow5_get_aux_names at Base 0.5.1
+ slow5_get_aux_types at Base 0.5.1
+ slow5_get_hdr_keys at Base 0.5.1
+ slow5_get_idx_path at Base 0.5.1
+ slow5_get_mem at Base 0.5.1
+ slow5_get_next at Base 0.5.1
+ slow5_get_next_bytes at Base 0.6.0
+ slow5_get_next_mem at Base 0.5.1
+ slow5_get_rids at Base 0.5.1
+ slow5_hdr_add at Base 0.6.0
+ slow5_hdr_add_attr at Base 0.5.1
+ slow5_hdr_add_rg at Base 0.5.1
+ slow5_hdr_add_rg_data at Base 0.5.1
+ slow5_hdr_attrs_to_str at Base 0.5.1
+ slow5_hdr_data_free at Base 0.5.1
+ slow5_hdr_data_init at Base 0.5.1
+ slow5_hdr_free at Base 0.5.1
+ slow5_hdr_fwrite at Base 0.5.1
+ slow5_hdr_get at Base 0.5.1
+ slow5_hdr_get_data at Base 0.5.1
+ slow5_hdr_init at Base 0.5.1
+ slow5_hdr_init_empty at Base 0.5.1
+ slow5_hdr_set at Base 0.5.1
+ slow5_hdr_to_mem at Base 0.5.1
+ slow5_hdr_types_to_str at Base 0.5.1
+ slow5_hdr_write at Base 0.6.0
+ slow5_idx_create at Base 0.5.1
+ slow5_idx_free at Base 0.5.1
+ slow5_idx_get at Base 0.5.1
+ slow5_idx_init at Base 0.5.1
+ slow5_idx_insert at Base 0.5.1
+ slow5_idx_load at Base 0.5.1
+ slow5_idx_to at Base 0.5.1
+ slow5_idx_unload at Base 0.5.1
+ slow5_idx_write at Base 0.5.1
+ slow5_init at Base 0.5.1
+ slow5_init_empty at Base 0.5.1
+ slow5_int_check at Base 0.5.1
+ slow5_is_c_label at Base 0.5.1
+ slow5_is_eof at Base 0.5.1
+ slow5_log_level at Base 0.5.1
+ slow5_memcpy_null_type at Base 0.5.1
+ slow5_memcpy_type_from_str at Base 0.5.1
+ slow5_name_get_fmt at Base 0.5.1
+ slow5_open at Base 0.5.1
+ slow5_open_with at Base 0.5.1
+ slow5_path_get_fmt at Base 0.5.1
+ slow5_pread_depress at Base 0.5.1
+ slow5_pread_depress_solo at Base 0.5.1
+ slow5_press_free at Base 0.5.1
+ slow5_press_init at Base 0.5.1
+ slow5_printf_compress at Base 0.5.1
+ slow5_ptr_compress at Base 0.5.1
+ slow5_ptr_compress_solo at Base 0.5.1
+ slow5_ptr_depress at Base 0.5.1
+ slow5_ptr_depress_solo at Base 0.5.1
+ slow5_rec_aux_free at Base 0.5.1
+ slow5_rec_depress_parse at Base 0.5.1
+ slow5_rec_free at Base 0.5.1
+ slow5_rec_fwrite at Base 0.5.1
+ slow5_rec_parse at Base 0.5.1
+ slow5_rec_rm at Base 0.5.1
+ slow5_rec_set at Base 0.5.1
+ slow5_rec_set_array at Base 0.5.1
+ slow5_rec_to_mem at Base 0.5.1
+ slow5_set_exit_condition at Base 0.5.1
+ slow5_set_log_level at Base 0.5.1
+ slow5_set_press at Base 0.6.0
+ slow5_signal_press_version_cmp at Base 0.5.1
+ slow5_str_to_aux_type at Base 0.5.1
+ slow5_strsep at Base 0.5.1
+ slow5_strtod_check at Base 0.5.1
+ slow5_strtof_check at Base 0.5.1
+ slow5_uint_check at Base 0.5.1
+ slow5_vasprintf at Base 0.5.1
+ slow5_version_cmp at Base 0.5.1
+ slow5_write at Base 0.6.0
+ slow5_write_bytes at Base 0.6.0
diff -Nru libslow5lib-0.7.0+dfsg/debian/rules libslow5lib-0.7.0+dfsg/debian/rules
--- libslow5lib-0.7.0+dfsg/debian/rules 2023-01-14 21:58:31.000000000 +0000
+++ libslow5lib-0.7.0+dfsg/debian/rules 2024-03-01 12:28:35.000000000 +0000
@@ -40,6 +40,7 @@
override_dh_install:
mv debian/tmp/usr/lib/$(DEB_HOST_MULTIARCH)/libslow5_static.a debian/tmp/usr/lib/$(DEB_HOST_MULTIARCH)/libslow5.a
d-shlibmove --commit \
+ --t64 \
--multiarch \
--devunversioned \
--exclude-la \
More information about the Debian-med-packaging
mailing list