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<div class="moz-cite-prefix">On 1/17/19 9:25 AM, Paul Gevers wrote:<br>
</div>
<blockquote type="cite"
cite="mid:1e210f28-e288-70fd-5127-1a890a00de69@debian.org">
<pre class="moz-quote-pre" wrap="">Source: picard-tools
Version: 2.18.23+dfsg-1
X-Debbugs-CC: <a class="moz-txt-link-abbreviated" href="mailto:debian-ci@lists.debian.org">debian-ci@lists.debian.org</a>
User: <a class="moz-txt-link-abbreviated" href="mailto:debian-ci@lists.debian.org">debian-ci@lists.debian.org</a>
Usertags: regression
Dear maintainers,
With a recent upload of picard-tools the autopkgtest of picard-tools
fails in testing when that autopkgtest is run with the binary packages
of picard-tools from unstable. It passes when run with only packages
from testing. In tabular form:
pass fail
picard-tools from testing 2.18.23+dfsg-1
versioned deps [0] from testing from unstable
all others from testing from testing
I copied some of the output at the bottom of this report.
Currently this regression is blocking the migration to testing [1]. Can
you please investigate the situation and fix it? If needed, please
change the bug's severity.
More information about this bug and the reason for filing it can be found on
<a class="moz-txt-link-freetext" href="https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation">https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation</a>
Paul
[0] You can see what packages were added from the second line of the log
file quoted below. The migration software adds source package from
unstable to the list if they are needed to install packages from
picard-tools/2.18.23+dfsg-1. I.e. due to versioned dependencies or
breaks/conflicts.
[1] <a class="moz-txt-link-freetext" href="https://qa.debian.org/excuses.php?package=picard-tools">https://qa.debian.org/excuses.php?package=picard-tools</a>
<a class="moz-txt-link-freetext" href="https://ci.debian.net/data/autopkgtest/testing/amd64/p/picard-tools/1717365/log.gz">https://ci.debian.net/data/autopkgtest/testing/amd64/p/picard-tools/1717365/log.gz</a>
autopkgtest [04:38:35]: test run-unit-test: [-----------------------
Error: Unable to initialize main class picard.cmdline.PicardCommandLine
Caused by: java.lang.NoClassDefFoundError:
org/broadinstitute/barclay/argparser/CommandLineProgramProperties
autopkgtest [04:38:36]: test run-unit-test: -----------------------]</pre>
</blockquote>
<p>Hi,</p>
<p>picard-tools depends on libbarclay-java. I see that it is has
been removed from testing, this is why it fails. I wonder however<br>
</p>
<p>Previous picard-tools in testing did not depend on this library.
Migration of picard-tools is currently blocked by this
libbarclay-java bug (#906973)</p>
<p><br>
</p>
<p>Olivier<br>
</p>
<blockquote type="cite"
cite="mid:1e210f28-e288-70fd-5127-1a890a00de69@debian.org">
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<pre class="moz-quote-pre" wrap="">_______________________________________________
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</blockquote>
<pre class="moz-signature" cols="72">--
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE
Tel: 02.99.84.71.95
gpg key id: 4096R/326D8438 (keyring.debian.org)
Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438
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