<div dir="auto"><div>Hello,<div dir="auto"><br></div><div dir="auto">Looks like there's a missing dependency on libfile-which-perl.</div><div dir="auto"><br></div><div dir="auto">Best,</div><div dir="auto">Andrius</div><br><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Wed, 4 Sep 2019, 17:02 Andreas Tille, <<a href="mailto:andreas@an3as.eu">andreas@an3as.eu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi,<br>
<br>
the bowtie2 package should be ready in git[1] for Python3 now but its<br>
build time test is failing for a probably unrelated reason:<br>
<br>
...<br>
make[2]: Leaving directory '/build/bowtie2-2.3.5.1'<br>
make -j1 test<br>
make[2]: Entering directory '/build/bowtie2-2.3.5.1'<br>
eval `perl -I /build/bowtie2-2.3.5.1/.tmp/lib/perl5 -Mlocal::lib=/build/bowtie2-2.3.5.1/.tmp` ; \<br>
sh ./scripts/test/simple_tests.sh<br>
Attempting to create directory /build/bowtie2-2.3.5.1/.tmp<br>
Can't locate File/Which.pm in @INC (you may need to install the File::Which module) (@INC contains: /build/bowtie2-2.3.5.1/scripts/test /build/bowtie2-2.3.5.1/.tmp/lib/perl5/5.28.1/x86_64-linux-gnu-thread-multi /build/bowtie2-2.3.5.1/.tmp/lib/perl5/5.28.1 /build/bowtie2-2.3.5.1/.tmp/lib/perl5/x86_64-linux-gnu-thread-multi /build/bowtie2-2.3.5.1/.tmp/lib/perl5 /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.28.1 /usr/local/share/perl/5.28.1 /usr/lib/x86_64-linux-gnu/perl5/5.28 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.28 /usr/share/perl/5.28 /build/bowtie2-2.3.5.1/.tmp/lib/perl5/5.28.0 /build/bowtie2-2.3.5.1/.tmp/lib/perl5/5.28.0/x86_64-linux-gnu-thread-multi /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at scripts/test/<a href="http://simple_tests.pl" rel="noreferrer noreferrer" target="_blank">simple_tests.pl</a> line 36.<br>
BEGIN failed--compilation aborted at scripts/test/<a href="http://simple_tests.pl" rel="noreferrer noreferrer" target="_blank">simple_tests.pl</a> line 36.<br>
make[2]: *** [Makefile:553: simple-test] Error 2<br>
<br>
<br>
Any help from the Perl team to fix this?<br>
<br>
Thanks a lot in advance<br>
<br>
     Andreas.<br>
<br>
<br>
[1] <a href="https://salsa.debian.org/med-team/bowtie2" rel="noreferrer noreferrer" target="_blank">https://salsa.debian.org/med-team/bowtie2</a><br>
<br>
-- <br>
<a href="http://fam-tille.de" rel="noreferrer noreferrer" target="_blank">http://fam-tille.de</a><br>
<br>
</blockquote></div></div></div>