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<p>Hi All <br>
</p>
On 10/04/2020 11:31, Andreas Tille wrote:<br>
<blockquote type="cite" cite="mid:20200410103116.GG31468@an3as.eu">
<pre class="moz-quote-pre" wrap="">I can not comment on Ben's research. Is there any bioinformatician who
could clarify what version of MUMmer should be sensibly packaged?</pre>
</blockquote>
<p>Maybe: as a general guide you should at least provide an equivalent of the most recent bioconda package:</p>
<p><a href="https://bioconda.github.io/recipes/mummer/README.html">https://bioconda.github.io/recipes/mummer/README.html</a></p>
<p>A quick literature search for citations to Mummer's canonical publication <a href="https://scholar.google.com/scholar?as_ylo=2020&hl=en&as_sdt=2005&sciodt=0,5&cites=15093378899564891093&scipsc=">
https://scholar.google.com/scholar?as_ylo=2020&hl=en&as_sdt=2005&sciodt=0,5&cites=15093378899564891093&scipsc=</a> suggested most researchers are using 3.23.</p>
<p>Watching the bioconda forum for updates is also useful to work out if there are significant improvements upstream.
<br>
</p>
<p>Jim.</p>
<p>PS. Keep up the amazing work - all my time is taken up wrangling Jalview right now but I'll continue to monitor emails (at least) and delurk when I can contribute...<br>
</p>
<blockquote type="cite" cite="mid:20200410103116.GG31468@an3as.eu"></blockquote>
<pre class="moz-signature" cols="72">--
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Dr JB Procter, Jalview Coordinator, The Barton Group
Division of Computational Biology, School of Life Sciences
University of Dundee, Dundee DD1 5EH, UK.
+44 1382 388734 | <a class="moz-txt-link-abbreviated" href="http://www.jalview.org">www.jalview.org</a> | <a class="moz-txt-link-abbreviated" href="http://www.compbio.dundee.ac.uk">www.compbio.dundee.ac.uk</a>
</pre>
<br>
<span style="font-size:10pt;">The University of Dundee is a registered Scottish Charity, No: SC015096</span>
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