<html>
<head>
<meta http-equiv="content-type" content="text/html; charset=UTF-8">
</head>
<body>
Source: python-cobra<br>
Version: 0.18.0-1<br>
Severity: serious<br>
<br>
Three of the last four builds of python-cobra on s390x have failed
with.<br>
<br>
<blockquote type="cite">
<pre>=================================== FAILURES ===================================
___________ test_model_summary_to_frame_with_fva[optlang-glpk-0.95] ____________
model = <Model e_coli_core at 0x3ff6e63b3d0>, opt_solver = 'optlang-glpk'
fraction = 0.95
@pytest.mark.parametrize("fraction", [0.95])
def test_model_summary_to_frame_with_fva(model, opt_solver, fraction):
"""Test model summary.to_frame() (using FVA)."""
if opt_solver == "optlang-gurobi":
pytest.xfail("FVA currently buggy")
# test non-fva version (these should be fixed for textbook model)
expected_in_fluxes = ['o2_e', 'glc__D_e', 'nh4_e', 'pi_e', np.nan,
np.nan, np.nan, np.nan, np.nan, np.nan, np.nan,
np.nan]
expected_out_fluxes = ['h2o_e', 'co2_e', 'h_e', 'for_e', 'ac_e', 'acald_e',
'pyr_e', 'etoh_e', 'lac__D_e', 'succ_e', 'akg_e',
'glu__L_e']
model.solver = opt_solver
solution = model.optimize()
out_df = model.summary(solution, fva=fraction).to_frame()
assert out_df[('IN_FLUXES', 'ID')].tolist() == expected_in_fluxes
> assert out_df[('OUT_FLUXES', 'ID')].tolist() == expected_out_fluxes
E AssertionError: assert ['h2o_e', 'co... 'pyr_e', ...] == ['h2o_e', 'co2...acald_e', ...]
E At index 5 diff: 'pyr_e' != 'acald_e'
E Use -v to get the full diff</pre>
</blockquote>
<br>
</body>
</html>