<div dir="ltr">Hi Andreas, <div><br></div><div>I would be happy to help on artemis. Obviously I will need</div><div>a more experienced developer helping me. :)</div><div><br></div><div>Cheers!</div><div>Emmanuel</div><div><br></div><div><br></div><div><br></div><div><br></div><div> <br><div><div><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div>Cheers, <br></div><div>Arias Emmanuel</div><div>@eamanu</div><div><span><a href="http://yaerobi.com" target="_blank">yaerobi.com</a></span></div></div></div></div></div></div><br></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, Jun 22, 2020 at 9:17 AM Andreas Tille <<a href="mailto:andreas@an3as.eu">andreas@an3as.eu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Hi,<br>
<br>
we are lagging several upstream versions behind due to new dependencies<br>
and other build issues.  I wonder whether somebody might volunteer to<br>
update artemis.  It would be great to get the latest version at least<br>
before the freeze starts.  While this takes some time I guess having<br>
latest artemis is time consuming as well - thus I'm asking here.<br>
<br>
Any takers?  Despite I'm the only remaining Uploader this exceeds my<br>
current time capacity.<br>
<br>
Kind regards<br>
<br>
      Andreas.<br>
<br>
On Sun, Jun 21, 2020 at 10:26:05PM +0200, Lucas Nussbaum wrote:<br>
> Source: artemis<br>
> Version: 17.0.1+dfsg-2<br>
> Severity: serious<br>
> Justification: FTBFS on amd64<br>
> Tags: bullseye sid ftbfs<br>
> Usertags: ftbfs-20200620 ftbfs-bullseye<br>
> <br>
> Hi,<br>
> <br>
> During a rebuild of all packages in sid, your package failed to build<br>
> on amd64.<br>
> <br>
> Relevant part (hopefully):<br>
> >  debian/rules build<br>
> > dh build --with javahelper<br>
> >    dh_update_autotools_config<br>
> >    dh_autoreconf<br>
> >    dh_auto_configure<br>
> >    jh_linkjars<br>
> >    debian/rules override_dh_auto_build<br>
> > make[1]: Entering directory '/<<PKGBUILDDIR>>'<br>
> > dh_auto_build -- jar<br>
> >     make -j4 "INSTALL=install --strip-program=true" jar<br>
> > make[2]: Entering directory '/<<PKGBUILDDIR>>'<br>
> > CLASSPATH=/usr/share/java/biojava.jar /usr/share/java/j2ssh-core.jar /usr/share/java/ibatis.jar /usr/share/java/log4j-1.2.jar /usr/share/java/postgresql-jdbc3.jar /usr/share/java/picard.jar /usr/share/java/htsjdk.jar /usr/share/java/commons-net.jar /usr/share/java/commons-lang3.jar /usr/share/java/batik-all.jar /usr/share/java/batik-awt-util.jar /usr/share/java/batik-dom.jar /usr/share/java/batik-ext.jar /usr/share/java/batik-svggen.jar /usr/share/java/batik-util.jar /usr/share/java/batik-xml.jar /usr/share/EMBOSS/jemboss/lib/jemboss.jar /<<PKGBUILDDIR>>: javac -source 1.8 -target 1.8   uk/ac/sanger/artemis/Action.java<br>
> > CLASSPATH=/usr/share/java/biojava.jar /usr/share/java/j2ssh-core.jar /usr/share/java/ibatis.jar /usr/share/java/log4j-1.2.jar /usr/share/java/postgresql-jdbc3.jar /usr/share/java/picard.jar /usr/share/java/htsjdk.jar /usr/share/java/commons-net.jar /usr/share/java/commons-lang3.jar /usr/share/java/batik-all.jar /usr/share/java/batik-awt-util.jar /usr/share/java/batik-dom.jar /usr/share/java/batik-ext.jar /usr/share/java/batik-svggen.jar /usr/share/java/batik-util.jar /usr/share/java/batik-xml.jar /usr/share/EMBOSS/jemboss/lib/jemboss.jar /<<PKGBUILDDIR>>: javac -source 1.8 -target 1.8   uk/ac/sanger/artemis/ActionController.java<br>
> > /bin/sh: 1: /usr/share/java/j2ssh-core.jar: Permission denied<br>
> > make[2]: *** [Makefile:48: uk/ac/sanger/artemis/Action.class] Error 126<br>
> <br>
> The full build log is available from:<br>
>    <a href="http://qa-logs.debian.net/2020/06/20/artemis_17.0.1+dfsg-2_unstable.log" rel="noreferrer" target="_blank">http://qa-logs.debian.net/2020/06/20/artemis_17.0.1+dfsg-2_unstable.log</a><br>
> <br>
> A list of current common problems and possible solutions is available at<br>
> <a href="http://wiki.debian.org/qa.debian.org/FTBFS" rel="noreferrer" target="_blank">http://wiki.debian.org/qa.debian.org/FTBFS</a> . You're welcome to contribute!<br>
> <br>
> About the archive rebuild: The rebuild was done on EC2 VM instances from<br>
> Amazon Web Services, using a clean, minimal and up-to-date chroot. Every<br>
> failed build was retried once to eliminate random failures.<br>
> <br>
> _______________________________________________<br>
> Debian-med-packaging mailing list<br>
> <a href="mailto:Debian-med-packaging@alioth-lists.debian.net" target="_blank">Debian-med-packaging@alioth-lists.debian.net</a><br>
> <a href="https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging" rel="noreferrer" target="_blank">https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging</a><br>
<br>
-- <br>
<a href="http://fam-tille.de" rel="noreferrer" target="_blank">http://fam-tille.de</a><br>
<br>
</blockquote></div>