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<p>Package: bedtools<br>
Version: 2.29.2+dfsg-4<br>
Severity: serious<br>
<br>
The autopkgtests for bedtools are failing on all tested
architectures (though they are "not a regression" on i386 and
armhf). When I look at the amd64 failure logs, the failures all
seem to be missing "../htsutil"<br>
<blockquote type="cite">
<pre>Testing bedtools bamtobed:
test-bamtobed.sh: line 22: ../htsutil: No such file or directory
Testing bedtools bamtofastq:
test-bamtofastq.sh: line 17: ../htsutil: No such file or directory
</pre>
</blockquote>
<br>
<blockquote type="cite">
<pre>Testing bedtools bedtobam:
bedtobam.t1...test-bedtobam.sh: line 23: ../htsutil: No such file or directory
</pre>
</blockquote>
</p>
<p>
<blockquote type="cite">
<pre>Testing bedtools coverage:
test-coverage.sh: line 22: ../htsutil: No such file or directory</pre>
</blockquote>
<blockquote type="cite">
<pre>Testing bedtools genomecov:
test-genomecov.sh: line 22: ../htsutil: No such file or directory
</pre>
</blockquote>
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<p>
<blockquote type="cite">
<pre>Testing bedtools intersect:
intersect.t01...ok
intersect.t02...ok
intersect.t03...ok
intersect.t04...ok
intersect.t05...ok
intersect.t06...ok
intersect.t07...ok
intersect.t08...ok
intersect.t09...ok
intersect.t10...ok
intersect.t11...ok
intersect.t12...ok
intersect.t13...ok
intersect.t14...ok
intersect.t15...ok
intersect.t16...ok
test-intersect.sh: line 200: ../htsutil: No such file or directory
</pre>
</blockquote>
<blockquote type="cite">
<pre>Testing bedtools multicov:
test-multicov.sh: line 17: ../htsutil: No such file or directory
</pre>
</blockquote>
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