<div dir="auto"><div>bcbio is dead, no objection to a removal from me</div><div><br></div><div data-smartmail="gmail_signature">-- <br>Michael R. Crusoe ; he/him<br><a href="https://orcid.org/0000-0002-2961-9670">https://orcid.org/0000-0002-2961-9670</a></div></div><br><div class="gmail_quote gmail_quote_container"><div dir="ltr" class="gmail_attr">On Sat, Mar 7, 2026, 14:31 Steffen Möller <<a href="mailto:steffen_moeller@gmx.de">steffen_moeller@gmx.de</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><br>
I checked on <a href="https://github.com/bcbio/bcbio-nextgen" rel="noreferrer noreferrer" target="_blank">https://github.com/bcbio/bcbio-nextgen</a> and tend to think that it can go as there does not seem to be any active development.<br>
@Michael, do you feel like saving it?<br>
<br>
Best,<br>
Steffen<br>
<br>
<br>
> Gesendet: Samstag, 7. März 2026 um 13:35<br>
> Von: "Andreas Tille" <<a href="mailto:tille@debian.org" target="_blank" rel="noreferrer">tille@debian.org</a>><br>
> An: "Steffen Möller" <<a href="mailto:steffen_moeller@gmx.de" target="_blank" rel="noreferrer">steffen_moeller@gmx.de</a>><br>
> Betreff: [<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>: Bug#1129487: Should bcbio be removed from unstable?]<br>
><br>
> Hi Steffen,<br>
> <br>
> kannst Du darauf bitte antworten?<br>
> <br>
> Viele Grüße<br>
> Andreas.<br>
> <br>
> ----- Weitergeleitete Nachricht von Helmut Grohne <<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>> -----<br>
> <br>
> Date: Mon, 02 Mar 2026 05:56:44 -0000<br>
> From: Helmut Grohne <<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>><br>
> To: <a href="mailto:submit@bugs.debian.org" target="_blank" rel="noreferrer">submit@bugs.debian.org</a><br>
> Subject: Bug#1129487: Should bcbio be removed from unstable?<br>
> X-Debian-PR-Message: report 1129487<br>
> X-Debian-PR-Package: src:bcbio<br>
> X-Debian-PR-Keywords: <br>
> X-Debian-PR-Source: bcbio<br>
> <br>
> Source: bcbio<br>
> Severity: important<br>
> User: <a href="mailto:helmutg@debian.org" target="_blank" rel="noreferrer">helmutg@debian.org</a><br>
> Usertags: sidremove<br>
> <br>
> Dear maintainer,<br>
> <br>
> I suggest removing bcbio from Debian for the following reasons:<br>
> * It accumulated one RC-bug:<br>
> + #928076: bcbio: Workflows not ready for non-developers to depend on.<br>
> Last modified: 1 year, 12 days<br>
> <br>
> * It is not part of trixie or forky and is not a key package.<br>
> <br>
> This bug serves as a pre-removal warning. After one month, the bug will be<br>
> reassigned to <a href="http://ftp.debian.org" rel="noreferrer noreferrer" target="_blank">ftp.debian.org</a> to actually request removal of the package.<br>
> <br>
> In case the package should be kept in unstable, please evaluate each of the<br>
> RC-bugs listed above.<br>
> * If the bug is meant to permanently prevent the package from entering testing<br>
> or a stable release, but this package should stay part of unstable, please<br>
> add a usertag:<br>
> <br>
> user <a href="mailto:helmutg@debian.org" target="_blank" rel="noreferrer">helmutg@debian.org</a><br>
> usertags NNN + sidremove-ignore<br>
> <br>
> * If the bug no longer applies, please close it. If it is closed, check<br>
> whether the fixed version is correct and adjust if necessary.<br>
> <br>
> * Is the bug really release-critical? If not, please downgrade.<br>
> <br>
> * If the bug still applies, please send a status update at least once a year.<br>
> <br>
> Once all of the mentioned RC bugs have been acted upon in one way or another,<br>
> please close this bug.<br>
> <br>
> In case the package should be removed from unstable, you may reassign this<br>
> bug report:<br>
> <br>
> Control: severity -1 normal<br>
> Control: retitle -1 RM: bcbio -- RoM; rc-buggy<br>
> Control: reassign -1 <a href="http://ftp.debian.org" rel="noreferrer noreferrer" target="_blank">ftp.debian.org</a><br>
> Control: affects -1 + src:bcbio<br>
> <br>
> Alternatively, you may wait a month and have it reassigned.<br>
> <br>
> In case you disagree with the above, please add a wontfix tag to this bug.<br>
> <br>
> Control: tags -1 + wontfix<br>
> <br>
> Doing so will also prevent automatic reassignment.<br>
> <br>
> Kind regards<br>
> <br>
> A tool for automatically removing packages from unstable<br>
> <br>
> This bug report has been automatically filed with little human intervention.<br>
> If the filing is unclear or in error, don't hesitate to contact<br>
> Helmut Grohne <<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>> for assistance.<br>
> <br>
> _______________________________________________<br>
> Debian-med-packaging mailing list<br>
> <a href="mailto:Debian-med-packaging@alioth-lists.debian.net" target="_blank" rel="noreferrer">Debian-med-packaging@alioth-lists.debian.net</a><br>
> <a href="https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging" rel="noreferrer noreferrer" target="_blank">https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging</a><br>
> <br>
> <br>
> ----- Ende weitergeleitete Nachricht -----<br>
> <br>
> -- <br>
> <a href="https://fam-tille.de" rel="noreferrer noreferrer" target="_blank">https://fam-tille.de</a></<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>></<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>></<a href="mailto:helmut@subdivi.de" target="_blank" rel="noreferrer">helmut@subdivi.de</a>><br>
</blockquote></div>