[From nobody Fri May 8 13:37:06 2026 Received: (at submit) by bugs.debian.org; 1 May 2026 23:12:45 +0000 X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02 (2024-03-25) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-120.0 required=4.0 tests=BAYES_00, BODY_INCLUDES_PACKAGE,DKIMWL_WL_HIGH,DKIM_SIGNED,DKIM_VALID, DKIM_VALID_AU,DKIM_VALID_EF,FOURLA,FROMDEVELOPER,HAS_PACKAGE, RCVD_IN_DNSWL_MED,SPF_HELO_PASS,SPF_NONE,USER_IN_DKIM_WELCOMELIST, WEIRD_PORT,X_DEBBUGS_CC autolearn=ham autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 133; hammy, 150; neutral, 332; spammy, 0. spammytokens: hammytokens:0.000-+--python3, 0.000-+--pkgbuilddir, 0.000-+--PKGBUILDDIR, 0.000-+--forky, 0.000-+--H*F:U*sanvila Return-path: <sanvila@debian.org> Received: from mitropoulos.debian.org ([2001:648:2ffc:deb:216:61ff:fe9d:958d]:57058) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wIx2L-000E3m-2F for submit@bugs.debian.org; Fri, 01 May 2026 23:12:45 +0000 Received: via submission from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA, CN=paradis.debian.org, EMAIL=hostmaster@paradis.debian.org (verified) by mitropoulos.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wIx2J-0005R3-2u for submit@bugs.debian.org; Fri, 01 May 2026 23:12:44 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.paradis; h=Date:Message-Id:Subject:To:From:Reply-To:Cc: MIME-Version:Content-Type:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=t2bIElfqoB9PPNcACNtCNNwdZGPOv/xqSB6nrSRm6Ao=; b=G79/3RxWThBZ4aFIbfxugYW7s4 C/O/CNb//Q2jBTSt6BedfJ+SRhbec5XoFERQlS6lT5M2sDFFdxtA/3G+zV2Ek1RXWSc6mATRUI+sR EEz/m49KECybifX5qyHP5TQUYgm3d/i7oqtNTI8nqqS8zJK0Yc6MrgkkdJ99dAVYcGmvCrPWlJbgI KjdIbmrEkdddsy2YvG5ZPXSoKRHBfAMykgBHYQTsiqBvYd+yzecnku9Svpx1maQnRroQRTVOQLt2B ZhiXV3EOCnkVI2vD89MIXcF1WFlmw0t5mcKvg3yolgrLHBpjUerwAW6/nfYmOSA0aFZYfGsagWZBA qHhuF6vA==; Received: from sanvila by paradis.debian.org with local (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wIx2I-0005IH-13 for submit@bugs.debian.org; Fri, 01 May 2026 23:12:42 +0000 From: Santiago Vila <sanvila@debian.org> To: Debian BTS <submit@bugs.debian.org> Subject: heudiconv: FTBFS: E ModuleNotFoundError: No module named 'ci' X-Debbugs-Cc: sanvila@debian.org Message-Id: <E1wIx2I-0005IH-13@paradis.debian.org> Date: Fri, 01 May 2026 23:12:42 +0000 Delivered-To: submit@bugs.debian.org Package: src:heudiconv Version: 1.3.2-1 Severity: serious Tags: ftbfs forky sid Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202605/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:heudiconv, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.14 3.13" --parallel=2 I: pybuild base:385: python3.14 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: Apache Software License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** [... snipped ...] except ImportError: import warnings warnings.warn( "Deprecated version of ci-info found, upgrade to remove this warning", DeprecationWarning ) > import ci as ci_info E ModuleNotFoundError: No module named 'ci' /usr/lib/python3/dist-packages/etelemetry/client.py:11: ModuleNotFoundError ------------------------------ Captured log call ------------------------------- WARNING heudiconv.main:main.py:362 Could not check for version updates: No module named 'ci' WARNING heudiconv.dicoms:dicoms.py:190 Ignoring /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/sample_nifti.json since not quite a "normal" DICOM: 'FileDataset' object has no attribute 'SeriesNumber' WARNING heudiconv.dicoms:dicoms.py:190 Ignoring /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/sample_nifti.nii.gz since not quite a "normal" DICOM: 'FileDataset' object has no attribute 'SeriesNumber' WARNING heudiconv.dicoms:dicoms.py:190 Ignoring /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/sample_nifti_params.txt since not quite a "normal" DICOM: 'FileDataset' object has no attribute 'SeriesNumber' WARNING heudiconv.bids:bids.py:1028 We cannot add the IntendedFor field: no fmap/ in /tmp/pytest-of-sbuild/pytest-1/test_notop_bidsoptions1_0/head/advanced applications libraries/sub-dbictest1 WARNING heudiconv:reproin.py:458 Could not determine the series name by looking at protocol_name, series_description fields WARNING heudiconv:reproin.py:667 Could not figure out where to stick 1 sequences: ['99-Phoenix Document'] WARNING heudiconv.bids:bids.py:1028 We cannot add the IntendedFor field: no fmap/ in /tmp/pytest-of-sbuild/pytest-1/test_notop_bidsoptions1_0/Development/Functional/sub-o6jgilro _________________________ test_phoenix_doc_conversion __________________________ import os from packaging.version import Version try: > import ci_info E ModuleNotFoundError: No module named 'ci_info' /usr/lib/python3/dist-packages/etelemetry/client.py:5: ModuleNotFoundError During handling of the above exception, another exception occurred: tmp_path = PosixPath('/tmp/pytest-of-sbuild/pytest-1/test_phoenix_doc_conversion0') def test_phoenix_doc_conversion(tmp_path: Path) -> None: subID = "Phoenix" args = [ "-c", "dcm2niix", "-o", str(tmp_path), "-b", "-f", "bids_PhoenixReport", "--files", pjoin(TESTS_DATA_PATH, "Phoenix"), "-s", subID, ] > runner(args) heudiconv/tests/test_heuristics.py:236: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ heudiconv/cli/run.py:30: in main workflow(**kwargs) heudiconv/main.py:479: in workflow prep_conversion( heudiconv/convert.py:259: in prep_conversion convert( heudiconv/convert.py:629: in convert res, prov_file = nipype_convert( heudiconv/convert.py:825: in nipype_convert convertnode = Node(Dcm2niix(from_file=fromfile), name="convert") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/nipype/interfaces/base/core.py:633: in __init__ super().__init__(**inputs) /usr/lib/python3/dist-packages/nipype/interfaces/base/core.py:191: in __init__ BaseInterface._etelemetry_version_data = check_latest_version() or "n/a" ^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/nipype/__init__.py:84: in check_latest_version import etelemetry /usr/lib/python3/dist-packages/etelemetry/__init__.py:1: in <module> from .client import get_project, check_available_version, BadVersionError _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ import os from packaging.version import Version try: import ci_info except ImportError: import warnings warnings.warn( "Deprecated version of ci-info found, upgrade to remove this warning", DeprecationWarning ) > import ci as ci_info E ModuleNotFoundError: No module named 'ci' /usr/lib/python3/dist-packages/etelemetry/client.py:11: ModuleNotFoundError ------------------------------ Captured log call ------------------------------- WARNING heudiconv.main:main.py:362 Could not check for version updates: No module named 'ci' __________________________________ test_cache __________________________________ import os from packaging.version import Version try: > import ci_info E ModuleNotFoundError: No module named 'ci_info' /usr/lib/python3/dist-packages/etelemetry/client.py:5: ModuleNotFoundError During handling of the above exception, another exception occurred: tmp_path = PosixPath('/tmp/pytest-of-sbuild/pytest-1/test_cache0') def test_cache(tmp_path: Path) -> None: args = [ "-f", "convertall", "--files", f"{TESTS_DATA_PATH}/axasc35.dcm", "-s", "S01", "-o", str(tmp_path), ] > runner(args) heudiconv/tests/test_main.py:304: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ heudiconv/cli/run.py:30: in main workflow(**kwargs) heudiconv/main.py:479: in workflow prep_conversion( heudiconv/convert.py:259: in prep_conversion convert( heudiconv/convert.py:629: in convert res, prov_file = nipype_convert( heudiconv/convert.py:825: in nipype_convert convertnode = Node(Dcm2niix(from_file=fromfile), name="convert") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/nipype/interfaces/base/core.py:633: in __init__ super().__init__(**inputs) /usr/lib/python3/dist-packages/nipype/interfaces/base/core.py:191: in __init__ BaseInterface._etelemetry_version_data = check_latest_version() or "n/a" ^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/nipype/__init__.py:84: in check_latest_version import etelemetry /usr/lib/python3/dist-packages/etelemetry/__init__.py:1: in <module> from .client import get_project, check_available_version, BadVersionError _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ import os from packaging.version import Version try: import ci_info except ImportError: import warnings warnings.warn( "Deprecated version of ci-info found, upgrade to remove this warning", DeprecationWarning ) > import ci as ci_info E ModuleNotFoundError: No module named 'ci' /usr/lib/python3/dist-packages/etelemetry/client.py:11: ModuleNotFoundError ------------------------------ Captured log call ------------------------------- WARNING heudiconv.main:main.py:362 Could not check for version updates: No module named 'ci' ____________________________ test_grouping[merged] _____________________________ import os from packaging.version import Version try: > import ci_info E ModuleNotFoundError: No module named 'ci_info' /usr/lib/python3/dist-packages/etelemetry/client.py:5: ModuleNotFoundError During handling of the above exception, another exception occurred: tmp_path = PosixPath('/tmp/pytest-of-sbuild/pytest-1/test_grouping_merged_0') subject = 'merged' @pytest.mark.parametrize("subject", ["merged"]) def test_grouping(tmp_path: Path, subject: str) -> None: dicoms = [op.join(TESTS_DATA_PATH, fl) for fl in ["axasc35.dcm", "phantom.dcm"]] # ensure DICOMs are different studies studyuids = { dcm.dcmread(fl, stop_before_pixels=True).StudyInstanceUID for fl in dicoms } assert len(studyuids) == len(dicoms) # symlink to common location outdir = tmp_path / "out" outdir.mkdir() datadir = tmp_path / subject datadir.mkdir() for fl in dicoms: os.symlink(fl, datadir / op.basename(fl)) template = op.join("{subject}/*.dcm") hargs = gen_heudiconv_args( str(tmp_path), str(outdir), subject, "convertall.py", template=template ) with pytest.raises(AssertionError): runner(hargs) # group all found DICOMs under subject, despite conflicts hargs += ["-g", "all"] > runner(hargs) heudiconv/tests/test_regression.py:176: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ heudiconv/cli/run.py:30: in main workflow(**kwargs) heudiconv/main.py:479: in workflow prep_conversion( heudiconv/convert.py:259: in prep_conversion convert( heudiconv/convert.py:629: in convert res, prov_file = nipype_convert( heudiconv/convert.py:825: in nipype_convert convertnode = Node(Dcm2niix(from_file=fromfile), name="convert") ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/nipype/interfaces/base/core.py:633: in __init__ super().__init__(**inputs) /usr/lib/python3/dist-packages/nipype/interfaces/base/core.py:191: in __init__ BaseInterface._etelemetry_version_data = check_latest_version() or "n/a" ^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/nipype/__init__.py:84: in check_latest_version import etelemetry /usr/lib/python3/dist-packages/etelemetry/__init__.py:1: in <module> from .client import get_project, check_available_version, BadVersionError _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ import os from packaging.version import Version try: import ci_info except ImportError: import warnings warnings.warn( "Deprecated version of ci-info found, upgrade to remove this warning", DeprecationWarning ) > import ci as ci_info E ModuleNotFoundError: No module named 'ci' /usr/lib/python3/dist-packages/etelemetry/client.py:11: ModuleNotFoundError ------------------------------ Captured log call ------------------------------- WARNING heudiconv.main:main.py:362 Could not check for version updates: No module named 'ci' WARNING heudiconv.main:main.py:362 Could not check for version updates: No module named 'ci' =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated import sre_parse ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated import sre_constants heudiconv/tests/test_convert.py: 2 warnings heudiconv/tests/test_dicoms.py: 2 warnings heudiconv/tests/test_heuristics.py: 13 warnings heudiconv/tests/test_main.py: 4 warnings heudiconv/tests/test_queue.py: 2 warnings heudiconv/tests/test_regression.py: 3 warnings /usr/lib/python3/dist-packages/etelemetry/client.py:8: DeprecationWarning: Deprecated version of ci-info found, upgrade to remove this warning warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ FAILED heudiconv/tests/test_convert.py::test_b0dwi_for_fmap - ModuleNotFoundE... FAILED heudiconv/tests/test_dicoms.py::test_embed_dicom_and_nifti_metadata - ... FAILED heudiconv/tests/test_heuristics.py::test_scans_keys_reproin[invocation0] FAILED heudiconv/tests/test_heuristics.py::test_scout_conversion - ModuleNotF... FAILED heudiconv/tests/test_heuristics.py::test_notop[bidsoptions0] - ModuleN... FAILED heudiconv/tests/test_heuristics.py::test_notop[bidsoptions1] - ModuleN... FAILED heudiconv/tests/test_heuristics.py::test_phoenix_doc_conversion - Modu... FAILED heudiconv/tests/test_main.py::test_cache - ModuleNotFoundError: No mod... FAILED heudiconv/tests/test_regression.py::test_grouping[merged] - ModuleNotF... ===== 9 failed, 151 passed, 10 skipped, 5 deselected, 28 warnings in 7.62s ===== E: pybuild pybuild:485: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_heudiconv/build; python3.13 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero and not test_reproin_largely_smoke' rm -fr -- /tmp/dh-xdg-rundir-71DyBsmI dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.14 3.13" --parallel=2 returned exit code 13 make: *** [debian/rules:20: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 -------------------------------------------------------------------------------- ]