[From nobody Tue Jun  9 16:05:06 2026
Received: (at maintonly) by bugs.debian.org; 11 May 2026 05:12:36 +0000
X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02
 (2024-03-25) on buxtehude.debian.org
X-Spam-Level: 
X-Spam-Status: No, score=-15.3 required=4.0 tests=BAYES_00,
 BODY_INCLUDES_PACKAGE,DKIM_SIGNED,DKIM_VALID,DKIM_VALID_EF,
 FREEMAIL_FORGED_FROMDOMAIN,FREEMAIL_FROM,FROMDEVELOPER,
 FVGT_m_MULTI_ODD,HEADER_FROM_DIFFERENT_DOMAINS,MONEY,PGPSIGNATURE,
 RCVD_IN_DNSWL_NONE,SPF_HELO_NONE,SPF_PASS autolearn=ham
 autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02
X-Spam-Bayes: score:0.0000 Tokens: new, 75; hammy, 150; neutral, 111; spammy,
 0. spammytokens: hammytokens:0.000-+--sk:iqizbae,
 0.000-+--sk:iQIzBAE, 
 0.000-+--forky, 0.000-+--cmake, 0.000-+--sha512
Return-path: &lt;gladky.anton@gmail.com&gt;
Received: from mail-wm1-x32f.google.com ([2a00:1450:4864:20::32f]:50276)
 by buxtehude.debian.org with esmtps
 (TLS1.3:ECDHE_X25519__RSA_PSS_RSAE_SHA256__AES_128_GCM:128)
 (Exim 4.96) (envelope-from &lt;gladky.anton@gmail.com&gt;)
 id 1wMIwU-005NUB-1s for maintonly@bugs.debian.org;
 Mon, 11 May 2026 05:12:36 +0000
Received: by mail-wm1-x32f.google.com with SMTP id
 5b1f17b1804b1-48a563e4ef7so34163005e9.0
 for &lt;maintonly@bugs.debian.org&gt;; Sun, 10 May 2026 22:12:34 -0700 (PDT)
DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=gmail.com; s=20251104; t=1778476352; x=1779081152; darn=bugs.debian.org;
 h=message-id:date:user-agent:to:from:subject:sender:from:to:cc
 :subject:date:message-id:reply-to;
 bh=WcojQvM164OuXg+SD/BsCxOg9jcSj7/OxJ4LPDJJSTA=;
 b=AY1Vgnmvb0F971tHAJucu5JtLTh0ty+lYVqgP1DSjqZBQdunVs7aCY1DuEUAWrJhK2
 AjFhR+qXcJLo8oHh2GoydWfaeaEZIj+TX0rsSG22Lc+Yl+7oS6dRDN0hrT1AYptRo5HV
 cGN2plHYmeNyGhLyP6TE2RrkVeJuomHsj8AZHSzAU5fPHcY5BIFvufA3SJbWfxf343Xv
 5GM0xGMwrqstlKboCuT3H+YtBOi90BmDqIXyseRZK/YVLYl4FvqTJDchwGyzlA6+zlEE
 6sdnqGbiCyBiuS91S1bhExXiRaDscHUV9Uxwan+CEwG5N0VPchEzvYmHRGmasQ5ZWriy
 3P/w==
X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed;
 d=1e100.net; s=20251104; t=1778476352; x=1779081152;
 h=message-id:date:user-agent:to:from:subject:sender:x-gm-gg
 :x-gm-message-state:from:to:cc:subject:date:message-id:reply-to;
 bh=WcojQvM164OuXg+SD/BsCxOg9jcSj7/OxJ4LPDJJSTA=;
 b=kBTnw3rXwAOdJu6T18zrY0GepYgJBksWRH8/KM7mbHAjkOg12LxC6ZKNoonyLEY9Cx
 ocWlivoDZOji66pI26IS++5FvObHI7izLJnX3AiVpW9s4l5k7TYoz9lCeV4OuAnhUg0J
 wHC8tQuhtsmDYQflOVARPS9fZnEIRU2Omo8EFxK/0ORJecB0X2sD3gW4lLyCK4iPPSO+
 DWqbi8BMdK+VTn03DFPbpdqnDDnarINeRGkrvKJ4wwYXk7Nadi5mriZeg6bGQN2DhFy1
 e4NSjZGtpLbBlN0ERSyiN75XiOAbGvG3g/546RfjC6dx1rHj3HdZUcEzv3VfNmJZoVzO
 tq4Q==
X-Gm-Message-State: AOJu0YyACdr0qsh2DNpfVG8FR6/CElPTqP8T5g5JiRUcxtV+wQawp/07
 /1z2+0MZQAMaAfCxl7IsOvWZ+Oo84p942WU7I0lqyqtukc43zNbueWdTaJ+YQA==
X-Gm-Gg: Acq92OGNFG/aU+Iseqw/YWgDAAoqiG6RohEIXeRwNkmalSYj545WlSGoxTfTN1l5Fuo
 W17eOFoKhy2/AiN5S9S3ptGUq+5h2d4nc378EIXmjYsjpLmxNZeJ/czr+thOTTUXRGuJLVd6/y5
 rbGkJFxa7YDYDVbMs9eQXDNUovHuYM3SsyvKm5jyxx/BKdJJSJB9OJoVujCjP84o1ymzMKsMtCA
 Y6vB8zYXmw7gIr7+FQmybHiM1BhPvUl88bW/8GsYm18ti8xia7h0Oepq4ikFn/uDlmSa1p1MjM6
 0S7TZ9e612RMKndh3kH5sNRyOLYqrdxgQkgO2cIQ5N0Zftmw+Z75gNewgrQ2UnIBmpxFkvdEAvB
 TIAJ1yGBX7RfChJF1rrdDZZOm4VGsw3wlxdd3gRzGGNDHaLYkWg2nMcr6Rivsmgkvb8cQbquqmV
 Hi97fqncl960+Lh02ikmj4Yk+fBZlTqmnkoGxY1rO//0TXG5W0/8EgOiIfPJijgmAZk5y9fBuXa
 qEpK/53yjENeCOr/QMbTC8jl58d
X-Received: by 2002:a05:600c:46d2:b0:48a:5546:61a1 with SMTP id
 5b1f17b1804b1-48e51f2f869mr330583135e9.15.1778476351895; 
 Sun, 10 May 2026 22:12:31 -0700 (PDT)
Received: from gladklaptop.localdomain
 (dynamic-077-011-142-233.77.11.pool.telefonica.de. [77.11.142.233])
 by smtp.gmail.com with ESMTPSA id
 5b1f17b1804b1-48e702e5516sm245201245e9.7.2026.05.10.22.12.31
 for &lt;maintonly@bugs.debian.org&gt;
 (version=TLS1_3 cipher=TLS_AES_256_GCM_SHA384 bits=256/256);
 Sun, 10 May 2026 22:12:31 -0700 (PDT)
Sender: Anton Gladky &lt;gladky.anton@gmail.com&gt;
Received: by gladklaptop.localdomain (Postfix, from userid 1000)
 id CC036F200B5; Mon, 11 May 2026 07:12:30 +0200 (CEST)
Subject: iqtree3: FTBFS with libeigen3-dev 5.0 (major version transition)
From: Anton Gladky &lt;gladk@debian.org&gt;
To: &lt;maintonly@bugs.debian.org&gt;
User-Agent: mail (GNU Mailutils 3.20)
Date: Mon, 11 May 2026 07:12:30 +0200
Message-Id: &lt;20260511051230.CC036F200B5@gladklaptop.localdomain&gt;
Delivered-To: maintonly@bugs.debian.org

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Package: src:iqtree3
Version: 3.1.1+dfsg-1
Severity: important
Tags: sid forky ftbfs
User: debian-devel@lists.debian.org
Usertags: eigen3-5.0

Dear Maintainer,

your package depends on libeigen3-dev. The upstream released a
new major version of this mathematical library, 5.0.0. Some
basic information about new features and changes in this version
can be found here:

  https://libeigen.gitlab.io/releases/5.0/

This is a major version change and may require code changes in packages
depending on eigen3. The key breaking changes include:

  - Minimum required C++ standard is now C++14
  - Changes in the build system integration
  - Some API name changes

iqtree3 FTBFS with libeigen3-dev 5.0.1. The full build log is available at:

  https://debusine.debian.net/debian/developers-gladk-eigen3/artifact/3756398/

Here is the most probably relevant part of the failing build log:
    ===========================================
- -- Detecting CXX compile features - done
CMake Error at CMakeLists.txt:93 (message):
  Eigen3 library not found.  Either install it or rerun cmake with
  -DEIGEN3_INCLUDE_DIR=&lt;installed_eigen3_dir&gt;


- -- Configuring incomplete, errors occurred!
	cd build.omp &amp;&amp; tail -v -n \+0 CMakeCache.txt
==&gt; CMakeCache.txt &lt;==
# This is the CMakeCache file.

    ===========================================
libeigen3-dev_5.0.1-1 is available in experimental.

When this package version lands into unstable (probably at the beginning
of June 2026), this bug will be increased in severity to serious.

Thanks,

Anton
-----BEGIN PGP SIGNATURE-----
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=S6aW
-----END PGP SIGNATURE-----
]