[From nobody Thu Oct 15 09:55:11 2026 Received: (at submit) by bugs.debian.org; 10 Oct 2026 10:55:33 +0000 X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02 (2024-03-25) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-121.4 required=4.0 tests=ALL_TRUSTED,BAYES_00, BODY_INCLUDES_PACKAGE,DKIMWL_WL_HIGH,DKIM_SIGNED,DKIM_VALID, DKIM_VALID_AU,DKIM_VALID_EF,FROMDEVELOPER,HAS_PACKAGE, USER_IN_DKIM_WELCOMELIST,WEIRD_PORT,X_DEBBUGS_CC autolearn=ham autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 19; hammy, 150; neutral, 166; spammy, 0. spammytokens: hammytokens:0.000-+--python3, 0.000-+--pkgbuilddir, 0.000-+--PKGBUILDDIR, 0.000-+--HTo:N*Debian, 0.000-+--forky Return-path: <sanvila@debian.org> Received: from muffat.debian.org ([2607:f8f0:614:1::1274:33]:33652) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1xFUjm-006ARy-1G for submit@bugs.debian.org; Sat, 10 Oct 2026 10:55:33 +0000 Received: via submission from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA, CN=paradis.debian.org, EMAIL=hostmaster@paradis.debian.org (verified) by muffat.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1xFUjl-001ZGx-2B for submit@bugs.debian.org; Sat, 10 Oct 2026 10:55:33 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.paradis; h=Date:Message-Id:Subject:To:From:Reply-To:Cc: MIME-Version:Content-Type:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=YkNxzTF4prb+NoveiUlhjS3XE/GueUNy+cGVQfu3pKM=; b=k29ogk44rDZ5RRSj802OqSreiI XKkFLXLsrjh2DBFj1DjdmPIlVN1OeMcZghlfScai6HM7g5Zl67TBQNqQWVRLx1uPiab4o/mzeAt7y v1tw3n2uC3F8vAQaSWhN/07t2WJqP4ryKSSm8GRfpVJmAjHfpHmzqEI4GCF8a/RcS2H5yAqQDQnCz 0k7sgmSko2od1tV3Z38vS7g1euwU+pqJuib6ehiKOZxc7DVQcNtOuDatxPLWL2Ji7DQXikXcG1p9W cx5E9zfwngawbD7wiuTibVcY4WUSzq3ueAt47K4R4FTKFLrNnGT9ifZfRLopGpbIzFC+0q4h5coTp Ja04EtZg==; Received: from sanvila by paradis.debian.org with local (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1xFUjl-001YyP-1o for submit@bugs.debian.org; Sat, 10 Oct 2026 10:55:33 +0000 From: Santiago Vila <sanvila@debian.org> To: Debian BTS <submit@bugs.debian.org> Subject: python-cogent: FTBFS: E sqlite3.OperationalError: unable to open database file X-Debbugs-Cc: sanvila@debian.org Message-Id: <E1xFUjl-001YyP-1o@paradis.debian.org> Date: Sat, 10 Oct 2026 10:55:33 +0000 Delivered-To: submit@bugs.debian.org Package: src:python-cogent Version: 2026.6.2a0+dfsg-3 Severity: serious Tags: ftbfs forky sid Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202610/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:python-cogent, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] /usr/lib/python3/dist-packages/scinexus/sqlite_data_store.py:76: in open_sqlite_db_rw db = _connect_sqlite_db_rw(path) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ /usr/lib/python3/dist-packages/scinexus/sqlite_data_store.py:83: in _connect_sqlite_db_rw db = sqlite3.connect( E sqlite3.OperationalError: unable to open database file =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1624 /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1624: PytestConfigWarning: No files were found in testpaths; consider removing or adjusting your testpaths configuration. Searching recursively from the current directory instead. self.args, self.args_source = self._decide_args( ../../../../../../usr/lib/python3/dist-packages/_pytest/python.py:124 /usr/lib/python3/dist-packages/_pytest/python.py:124: PytestRemovedIn10Warning: Passing a non-Collection iterable to parametrize is deprecated. Test: tests/test_evolve/test_coevolution.py::test_joint_entropies, argvalues type: combinations Please convert to a list or tuple. See https://docs.pytest.org/en/stable/deprecations.html#parametrize-iterators metafunc.parametrize(*marker.args, **marker.kwargs, _param_mark=marker) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ ERROR tests/test_app/test_init.py - sqlite3.OperationalError: unable to open ... !!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!! ================== 3 deselected, 2 warnings, 1 error in 8.44s ================== E: pybuild pybuild:485: test: plugin pyproject failed with: exit code=2: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.14_cogent3/build; python3.14 -m pytest --ignore=test_app/test_plugins.py -k 'not test_pickleable_member_roundtrip and not test_pickleable_roundtrip and not internet and not test_load_from_url ' dh_auto_test: error: pybuild --test -i python{version} -p 3.14 --parallel=1 returned exit code 13 make: *** [debian/rules:30: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 -------------------------------------------------------------------------------- ]