[From nobody Sat Oct 17 17:09:07 2026 Received: (at submit) by bugs.debian.org; 5 Oct 2026 16:34:48 +0000 X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02 (2024-03-25) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-121.4 required=4.0 tests=ALL_TRUSTED,BAYES_00, BODY_INCLUDES_PACKAGE,DKIMWL_WL_HIGH,DKIM_SIGNED,DKIM_VALID, DKIM_VALID_AU,DKIM_VALID_EF,FROMDEVELOPER,HAS_PACKAGE,SPF_HELO_NONE, SPF_PASS,USER_IN_DKIM_WELCOMELIST,X_DEBBUGS_CC autolearn=ham autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 47; hammy, 150; neutral, 141; spammy, 0. spammytokens: hammytokens:0.000-+--Hx-spam-relays-external:sk:stravin, 0.000-+--H*RT:sk:stravin, 0.000-+--Hx-spam-relays-external:311, 0.000-+--H*RT:311, 0.000-+--H*RT:108 Return-path: <sanvila@debian.org> Received: from stravinsky.debian.org ([2001:41b8:202:deb::311:108]:36018) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1xDleK-00EXOz-0t for submit@bugs.debian.org; Mon, 05 Oct 2026 16:34:48 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.stravinsky; h=X-Debian-User:Content-Transfer-Encoding:Content-Type :To:Subject:From:MIME-Version:Date:Message-ID:Reply-To:Cc:Content-ID: Content-Description:In-Reply-To:References; bh=uaQu3aphswI6h6IGtAba7dx5t7L0u+nHaZ8ljzB2rZg=; b=e33tWQUt+pYDWtmLoXhn0oZ+2j 9T4Ss0qxNiQgyQahYMLOk3ctOO92fiK03xHk3CmgGNlgYE5xu03DEt334Tox86PU66zs25ea3I28E 4EjzuxIKeCEeIsMLXOgkdu6nhy2xU3+LoOXwriFsuZqqmdU9IxX/Gr7J3Ro2Xq4sApBsAWEorIfsU 9/W3G65p9kzaJBato33w7rGhP2srO48bKqGa0UDPaA/FHtA13QQeuw+b1ONx58hJvzb2wGPKlrYGv Ap3YtZM2vV4B5yB3TCGCVEcKAzloEQAygD48L04MkX36NiuKGKvEOANDDPrdgPZhV4POt5rjxwi6D FGv/Z7uQ==; Received: from authenticated-user by stravinsky.debian.org with esmtpsa (TLS1.3:ECDHE_X25519__RSA_PSS_RSAE_SHA256__AES_128_GCM:128) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1xDleI-003KPy-1K for submit@bugs.debian.org; Mon, 05 Oct 2026 16:34:46 +0000 Message-ID: <07a2d608-181c-4ad3-b5db-21e65cf50bf9@debian.org> Date: Mon, 5 Oct 2026 18:34:45 +0200 MIME-Version: 1.0 User-Agent: Mozilla Thunderbird From: Santiago Vila <sanvila@debian.org> Subject: abyss: FTBFS: collect2: error: ld returned 1 exit status To: Debian BTS <submit@bugs.debian.org> Content-Language: en-US X-Debbugs-Cc: sanvila@debian.org Content-Type: text/plain; charset=UTF-8; format=flowed Content-Transfer-Encoding: 7bit X-Debian-User: sanvila Delivered-To: submit@bugs.debian.org Package: src:abyss Version: 2.3.10-2 Severity: serious Tags: ftbfs forky sid Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202610/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:abyss, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] x86_64-linux-gnu-g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -I.. -DPAIRED_DBG -I/<<PKGBUILDDIR>> -isystem/usr/lib/x86_64-linux-gnu/openmpi/include -Wdate-time -D_FORTIFY_SOURCE=2 -isystem/<<PKGBUILDDIR>>/boost_1_56_0 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DGTEST_USE_OWN_TR1_TUPLE=0 -Wno-error=dangling-reference -Wno-deprecated-declarations -c -o abyss_paired_dbg_mpi-MessageBuffer.o `test -f 'MessageBuffer.cpp' || echo './'`MessageBuffer.cpp x86_64-linux-gnu-g++ -std=c++11 -DHAVE_CONFIG_H -I. -I.. -I.. -DPAIRED_DBG -I/<<PKGBUILDDIR>> -isystem/usr/lib/x86_64-linux-gnu/openmpi/include -Wdate-time -D_FORTIFY_SOURCE=2 -isystem/<<PKGBUILDDIR>>/boost_1_56_0 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DGTEST_USE_OWN_TR1_TUPLE=0 -Wno-error=dangling-reference -Wno-deprecated-declarations -c -o abyss_paired_dbg_mpi-Messages.o `test -f 'Messages.cpp' || echo './'`Messages.cpp x86_64-linux-gnu-g++ -std=c++11 -Wall -Wextra -Werror -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DGTEST_USE_OWN_TR1_TUPLE=0 -Wno-error=dangling-reference -Wno-deprecated-declarations -L/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,-z,relro -Wl,-z,now -o ABYSS-P ABYSS_P-parallelAbyss.o ABYSS_P-CommLayer.o ABYSS_P-NetworkSequenceCollection.o ABYSS_P-MessageBuffer.o ABYSS_P-Messages.o ../Assembly/libassembly.a ../Common/libcommon.a ../DataLayer/libdatalayer.a ../DataBase/libdb.a -lsqlite3 -ldl -lm -lmpi -ldl -lm /usr/bin/x86_64-linux-gnu-ld.bfd: ABYSS_P-CommLayer.o: undefined reference to symbol 'ompi_mpi_unsigned_long_long' /usr/bin/x86_64-linux-gnu-ld.bfd: /usr/lib/x86_64-linux-gnu/libopen_mpi.so.40: error adding symbols: DSO missing from command line collect2: error: ld returned 1 exit status make[4]: *** [Makefile:431: ABYSS-P] Error 1 make[4]: *** Waiting for unfinished jobs.... make[4]: Leaving directory '/<<PKGBUILDDIR>>/Parallel' make[3]: *** [Makefile:502: all-recursive] Error 1 make[3]: Leaving directory '/<<PKGBUILDDIR>>' make[2]: *** [Makefile:422: all] Error 2 make[2]: Leaving directory '/<<PKGBUILDDIR>>' dh_auto_build: error: make -j2 returned exit code 2 make[1]: *** [debian/rules:18: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<<PKGBUILDDIR>>' make: *** [debian/rules:11: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 -------------------------------------------------------------------------------- ]