[From nobody Mon Oct 19 13:37:05 2026 Received: (at submit) by bugs.debian.org; 17 Jun 2026 16:15:22 +0000 X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02 (2024-03-25) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-121.6 required=4.0 tests=ALL_TRUSTED,BAYES_00, BODY_INCLUDES_PACKAGE,DKIMWL_WL_HIGH,DKIM_SIGNED,DKIM_VALID, DKIM_VALID_AU,DKIM_VALID_EF,FROMDEVELOPER,HAS_PACKAGE, PP_MIME_FAKE_ASCII_TEXT,USER_IN_DKIM_WELCOMELIST,X_DEBBUGS_CC autolearn=ham autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 56; hammy, 150; neutral, 141; spammy, 0. spammytokens: hammytokens:0.000-+--pkgbuilddir, 0.000-+--PKGBUILDDIR, 0.000-+--HTo:N*Debian, 0.000-+--forky, 0.000-+--H*F:U*sanvila Return-path: <sanvila@debian.org> Received: from muffat.debian.org ([2607:f8f0:614:1::1274:33]:42468) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wZsvC-001Ab4-25 for submit@bugs.debian.org; Wed, 17 Jun 2026 16:15:22 +0000 Received: via submission from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA, CN=paradis.debian.org, EMAIL=hostmaster@paradis.debian.org (verified) by muffat.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wZsvC-002exX-1p for submit@bugs.debian.org; Wed, 17 Jun 2026 16:15:22 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.paradis; h=Date:Message-Id:Subject:To:From:Reply-To:Cc: MIME-Version:Content-Type:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=s5K/f2CW3qwbRzbBy9q33exXhb6Vrk1KG9wBrbb05iE=; b=pNKS7dbcIhZKmR8q3I1izVBgcA eVIkbDqssQe4mPqDtQKM+9ldqApOWx/8xy/mbEedpSUbAYw3pWohQ+z0rLKlDA8Zlg6sx5+/oBiXQ M63cmzQmBYdgo0C370THpPLPkGJlB1FMQJOwEuXFpFXLqnc3euCbu5fWvZTyuNNIcjUbR7fHJVZla bh7Tlrq3V8NcGVdi7qlg8dZlJmRMWDur3bmasGKe3u1iMeDIibhWqox9tWxLyg4P9uSbHNLdL1K4j Ri81vJGP4oAuaw+mXU93odMx28CDvNzWy6g28OXvCSzOcBwK1VugSGeboqzhTFyhtvK89TaV1DM68 59YJ+abw==; Received: from sanvila by paradis.debian.org with local (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wZsvC-000uR3-1T for submit@bugs.debian.org; Wed, 17 Jun 2026 16:15:22 +0000 From: Santiago Vila <sanvila@debian.org> To: Debian BTS <submit@bugs.debian.org> Subject: mrtrix3: FTBFS: core/math/stats/glm.cpp:185:34: error: invalid use of non-static member function 'Eigen::JacobiSVD<typename Eigen::DenseBase<Derived>::PlainObject> Eigen::MatrixBase<Derived>::jacobiSvd(unsigned int) const [with Derived = Eigen::Matrix<double, -1, -1>; typename Eigen::DenseBase<Derived>::PlainObject = Eigen::Matrix<double, -1, -1>]' X-Debbugs-Cc: sanvila@debian.org Message-Id: <E1wZsvC-000uR3-1T@paradis.debian.org> Date: Wed, 17 Jun 2026 16:15:22 +0000 Delivered-To: submit@bugs.debian.org Package: src:mrtrix3 Version: 3.0.8-2 Severity: serious Tags: ftbfs forky sid Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202606/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:mrtrix3, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] ( 82/548) [CC] tmp/core/misc/bitset.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/misc/bitset.cpp -o tmp/core/misc/bitset.o ( 83/548) [CC] tmp/core/file/dicom/image.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/image.cpp -o tmp/core/file/dicom/image.o ERROR: ( 80/548) [CC] tmp/core/math/stats/glm.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/stats/glm.cpp -o tmp/core/math/stats/glm.o failed with output core/math/stats/glm.cpp: In function ‘MR::Math::Stats::matrix_type MR::Math::Stats::GLM::solve_betas(const MR::Math::Stats::matrix_type&, const MR::Math::Stats::matrix_type&)’: core/math/stats/glm.cpp:185:34: error: invalid use of non-static member function ‘Eigen::JacobiSVD<typename Eigen::DenseBase<Derived>::PlainObject> Eigen::MatrixBase<Derived>::jacobiSvd(unsigned int) const [with Derived = Eigen::Matrix<double, -1, -1>; typename Eigen::DenseBase<Derived>::PlainObject = Eigen::Matrix<double, -1, -1>]’ 185 | return design.jacobiSvd<Eigen::ComputeThinU | Eigen::ComputeThinV>().solve (measurements); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/SVD:37, from /usr/include/eigen3/Eigen/Geometry:13, from ./core/types.h:78, from ./core/mrtrix.h:38, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/math/stats/glm.h:20, from core/math/stats/glm.cpp:17: /usr/include/eigen3/Eigen/src/SVD/JacobiSVD.h:805:1: note: declared here 805 | MatrixBase<Derived>::jacobiSvd(unsigned int computationOptions) const | ^~~~~~~~~~~~~~~~~~~ core/math/stats/glm.cpp:185:78: error: expected primary-expression before ‘)’ token 185 | return design.jacobiSvd<Eigen::ComputeThinU | Eigen::ComputeThinV>().solve (measurements); | ^ make[1]: *** [debian/rules:39: override_dh_auto_build] Error 1 make[1]: Leaving directory '/<<PKGBUILDDIR>>' make: *** [debian/rules:33: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 -------------------------------------------------------------------------------- ]