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Message-ID: <ba17c1cdbd5d991ffa276ca81be32cac@debian.org>
From: roehling@debian.org
To: maintonly@bugs.debian.org
Subject: python-mrcfile: autopkgtest regression with NumPy 2.4
Date: Tue, 17 Mar 2026 11:46:19 +0100
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Source: python-mrcfile
Version: 1.5.4-3
Severity: important
User: debian-python@lists.debian.org
Usertags: numpy2.4

Dear maintainer,

According to https://ci.debian.net data, your package python-mrcfile has an
autopkgtest regression with numpy.

The following architectures failed: amd64, arm64.

Hopefully relevant excerpt from
https://ci.debian.net/packages/p/python-mrcfile/unstable/amd64/69506941/
follows:

101s tests/test_bzip2mrcfile.py::Bzip2MrcFileTest::test_data_transposed_in_place_is_written_without_errors FAILED [  3%]
112s tests/test_gzipmrcfile.py::GzipMrcFileTest::test_data_transposed_in_place_is_written_without_errors FAILED [ 20%]
114s tests/test_mrcfile.py::MrcFileTest::test_data_transposed_in_place_is_written_without_errors FAILED [ 43%]
114s tests/test_mrcmemmap.py::MrcMemmapTest::test_data_transposed_in_place_is_written_without_errors FAILED [ 67%]
115s =================================== FAILURES ===================================
115s E       DeprecationWarning: Setting the strides on a NumPy array has been deprecated in NumPy 2.4.
115s E       As an alternative, you can create a new view using np.lib.stride_tricks.as_strided.
115s E       DeprecationWarning: Setting the strides on a NumPy array has been deprecated in NumPy 2.4.
115s E       As an alternative, you can create a new view using np.lib.stride_tricks.as_strided.
115s E       DeprecationWarning: Setting the strides on a NumPy array has been deprecated in NumPy 2.4.
115s E       As an alternative, you can create a new view using np.lib.stride_tricks.as_strided.
115s E       DeprecationWarning: Setting the strides on a NumPy array has been deprecated in NumPy 2.4.
115s E       As an alternative, you can create a new view using np.lib.stride_tricks.as_strided.
115s FAILED tests/test_bzip2mrcfile.py::Bzip2MrcFileTest::test_data_transposed_in_place_is_written_without_errors
115s FAILED tests/test_gzipmrcfile.py::GzipMrcFileTest::test_data_transposed_in_place_is_written_without_errors
115s FAILED tests/test_mrcfile.py::MrcFileTest::test_data_transposed_in_place_is_written_without_errors
115s FAILED tests/test_mrcmemmap.py::MrcMemmapTest::test_data_transposed_in_place_is_written_without_errors
115s ======================== 4 failed, 861 passed in 21.06s ========================
115s python               FAIL non-zero exit status 1
115s python               FAIL non-zero exit status 1
]