[From nobody Tue Jun 30 07:01:10 2026 Received: (at submit) by bugs.debian.org; 13 Aug 2023 21:17:08 +0000 X-Spam-Checker-Version: SpamAssassin 3.4.6-bugs.debian.org_2005_01_02 (2021-04-09) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-102.1 required=4.0 tests=ATTENDEES_DBSPAM_BODY3, ATTENDEES_DBSPAM_BODY7,BAYES_00,DIGITS_LETTERS,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,DKIM_VALID_AU,DKIM_VALID_EF,FOURLA, FROMDEVELOPER,FVGT_m_MULTI_ODD,MURPHY_DRUGS_REL8,SPF_HELO_NONE, SPF_NONE,UNPARSEABLE_RELAY,USER_IN_DKIM_WELCOMELIST, USER_IN_DKIM_WHITELIST autolearn=no autolearn_force=no version=3.4.6-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 268; hammy, 150; neutral, 258; spammy, 0. spammytokens: hammytokens:0.000-+--pkgbuilddir, 0.000-+--PKGBUILDDIR, 0.000-+--Hx-spam-relays-external:sk:stravin, 0.000-+--H*RT:sk:stravin, 0.000-+--Hx-spam-relays-external:311 Return-path: <lucas@debian.org> Received: from stravinsky.debian.org ([2001:41b8:202:deb::311:108]:50436) from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA, CN=stravinsky.debian.org, EMAIL=hostmaster@stravinsky.debian.org (verified) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.94.2) (envelope-from <lucas@debian.org>) id 1qVIST-004GMO-46 for submit@bugs.debian.org; Sun, 13 Aug 2023 21:17:07 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.stravinsky; h=X-Debian-User:Message-Id:Date:Subject:To:From: Reply-To:Cc:MIME-Version:Content-Type:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=PkceqMdX1FIP3waLGTuNTeEE/gfZfEA4UgSVw+uI6SY=; b=tDHFcqZPMNcbhlP3qKuXjeOm1l koCodqVM0E3F3vw5EPIFsIW1OQYepW00eNF290jTHqbRpB8MAuEemW/o56SBiQHcfIl1JVyST0mEs ttbA79HwO+nMkA0lyKaQU94vpXZDqDCKrqZ4UfvFk18HeoPPOd/mze1GJvC6XwYiWSL5PMdKz3aqN BuSliJLrIuMvuymx/7zHS5TYjFZakbDH/vLVYQ+9u4QCYRblOQkd/hn8D7VZK6kc5Al+Xmv2XVv3E Oo3LqljyzFGYpm+8zqge9VhaE4Nh31BGAXjOehSUw91qe17d6S6W07TyHYENbPHfHGz6TObF8RQC7 beLILFIg==; Received: from authenticated user by stravinsky.debian.org with esmtpsa (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.94.2) (envelope-from <lucas@debian.org>) id 1qVISR-001x03-3R for submit@bugs.debian.org; Sun, 13 Aug 2023 21:17:05 +0000 From: Lucas Nussbaum <lucas@debian.org> To: submit@bugs.debian.org Subject: hypre: Fails to build source after successful build Date: Sun, 13 Aug 2023 21:20:47 +0200 Message-Id: <1691954447.997839.1277098.nullmailer@grub.nussbaum.fr> X-Debian-User: lucas Delivered-To: submit@bugs.debian.org Source: hypre Version: 2.28.0-6 Severity: minor Tags: trixie sid ftbfs User: lucas@debian.org Usertags: ftbfs-sab-20230813 ftbfs-source-after-build User: debian-qa@lists.debian.org Usertags: qa-doublebuild Hi, This package fails to build a source package after a successful build (dpkg-buildpackage ; dpkg-buildpackage -S). This is probably a clear violation of Debian Policy section 4.9 (clean target), but this is filed as severity:minor for now, because a discussion on debian-devel showed that we might want to revisit the requirement of a working 'clean' target. More information about this class of issues, included common problems and solutions, is available at https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild Relevant part of the build log: > cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S > ------------------------------------------------------------------------------------------------------------------ > > dpkg-buildpackage: info: source package hypre > dpkg-buildpackage: info: source version 2.28.0-6 > dpkg-buildpackage: info: source distribution unstable > dpkg-buildpackage: info: source changed by Drew Parsons <dparsons@debian.org> > dpkg-source --before-build . > fakeroot debian/rules clean > dh clean --sourcedirectory=src > debian/rules override_dh_auto_clean > make[1]: Entering directory '/<<PKGBUILDDIR>>' > echo "Running clean" > Running clean > rm -rf /<<PKGBUILDDIR>>/debian/tmp > rm -f src/configure.in > rm -f src/config.log > rm -f src/config/config.guess > rm -f src/config/config.sub > cd src/test; \ > for TEST in TEST_*; do \ > rm -f ${TEST}.stdout ${TEST}.stderr; \ > done > dh_auto_clean > cd src && make -j8 distclean > make[2]: Entering directory '/<<PKGBUILDDIR>>/src' > Dist-Cleaning blas ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/blas' > rm -rf *.o > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/blas' > Dist-Cleaning lapack ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/lapack' > rm -rf *.o > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/lapack' > Dist-Cleaning utilities ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/utilities' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/utilities' > Dist-Cleaning multivector ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/multivector' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/multivector' > Dist-Cleaning krylov ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/krylov' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/krylov' > Dist-Cleaning seq_mv ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/seq_mv' > rm -f csr_spgemm_device_numer[1-9].c > rm -f csr_spgemm_device_numer10.c > rm -f csr_spgemm_device_symbl[1-9].c > rm -f csr_spgemm_device_symbl10.c > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/seq_mv' > Dist-Cleaning parcsr_mv ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/parcsr_mv' > rm -f *.o *.obj libHYPRE* > rm -f driver driver_matvec driver_matmul > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/parcsr_mv' > Dist-Cleaning parcsr_block_mv ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/parcsr_block_mv' > rm -rf *.o libHYPRE_* > rm -f driver driver_matvec driver_matmul > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/parcsr_block_mv' > Dist-Cleaning distributed_matrix ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/distributed_matrix' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/distributed_matrix' > Dist-Cleaning IJ_mv ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/IJ_mv' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/IJ_mv' > Dist-Cleaning matrix_matrix ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/matrix_matrix' > rm -f *.o lib* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/matrix_matrix' > Dist-Cleaning parcsr_ls ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/parcsr_ls' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/parcsr_ls' > Dist-Cleaning struct_mv ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/struct_mv' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/struct_mv' > Dist-Cleaning struct_ls ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/struct_ls' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/struct_ls' > Dist-Cleaning sstruct_mv ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/sstruct_mv' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/sstruct_mv' > Dist-Cleaning sstruct_ls ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/sstruct_ls' > rm -f *.o *.obj libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/sstruct_ls' > Dist-Cleaning /<<PKGBUILDDIR>>/src/distributed_ls ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/distributed_ls' > make[4]: Entering directory '/<<PKGBUILDDIR>>/src/distributed_ls/pilut' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/distributed_ls/pilut' > make[4]: Entering directory '/<<PKGBUILDDIR>>/src/distributed_ls/ParaSails' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/distributed_ls/ParaSails' > make[4]: Entering directory '/<<PKGBUILDDIR>>/src/distributed_ls/Euclid' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/distributed_ls/Euclid' > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/distributed_ls' > Dist-Cleaning lib ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/lib' > rm -f *.o libHYPRE* > rm -rf pchdir tca.map *inslog* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/lib' > Dist-Cleaning docs ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/docs' > make[4]: Entering directory '/<<PKGBUILDDIR>>/src/docs/usr-manual' > make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. > rm -rf _build/* > make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/docs/usr-manual' > make[4]: Entering directory '/<<PKGBUILDDIR>>/src/docs/ref-manual' > make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. > make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/docs/ref-manual' > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/docs' > Dist-Cleaning test ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/test' > rm -f *.o *.obj *.csv > rm -rf pchdir tca.map *inslog* > rm -f ij ij_assembly sstruct struct ams_driver maxwell_unscaled struct_migrate sstruct_fac ij_mv ij_mm zboxloop > rm -f ex1_for ex3_for ex5_for ex6_for ex7_for > rm -f f77_ij f77_ij_mv f77_struct > rm -f cxx_ij cxx_sstruct cxx_struct cxx_* > rm -f TEST_examples/*.out* > rm -f TEST_examples/*.err* > rm -f TEST_fac/*.out* > rm -f TEST_fac/*.err* > rm -f TEST_ij/*.out* > rm -f TEST_ij/*.err* > rm -f TEST_ij/*.txt* > rm -f TEST_ij/vectors.* > rm -f TEST_sstruct/*.out* > rm -f TEST_sstruct/*.err* > rm -f TEST_struct/*.out* > rm -f TEST_struct/*.err* > rm -f ex1 ex2 ex3 ex4 ex5 ex5big ex5b ex5b77 ex6 ex7 ex8 ex9 ex15big ex18comp > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/test' > Dist-Cleaning examples ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/examples' > rm -f ex1.o ex2.o ex3.o ex4.o ex5.o ex5f.o ex6.o ex7.o ex8.o ex9.o ex11.o ex12.o ex12f.o ex13.o ex14.o ex15.o ex16.o > rm -f ex5big.o ex15big.o > rm -f ex5f.o ex12f.o > rm -f ex17.o ex18.o > rm -f ex18comp.o > rm -f cudaf.o cudaf.mod ex*.o > cd vis; make clean > make[4]: Entering directory '/<<PKGBUILDDIR>>/src/examples/vis' > make[4]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. > rm -f *mesh* *sol* *data* > make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/examples/vis' > rm -f ex1 ex2 ex3 ex4 ex5 ex5f ex6 ex7 ex8 ex9 ex11 ex12 ex12f ex13 ex14 ex15 ex16 ex1*~ ex2*~ ex3*~ ex4*~ ex5*~ ex5f*~ ex6*~ ex7*~ ex8*~ ex9*~ ex11*~ ex12*~ ex12f*~ ex13*~ ex14*~ ex15*~ ex16*~ > rm -f ex5big ex15big ex5big*~ ex15big*~ > rm -f ex5f*~ ex12f*~ > rm -f ex17 ex18 ex17*~ ex18*~ > rm -f ex18comp ex18comp*~ > rm -fr README* > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/examples' > Dist-Cleaning examples/docs ... > make[3]: Entering directory '/<<PKGBUILDDIR>>/src/examples/docs' > rm -f *.html > rm -f *~ > rm -rf ../*.html ../README_files > make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/examples/docs' > rm -rf tca.map pchdir *inslog* > rm -rf ./config/Makefile.config > rm -rf ./TAGS > rm -rf ./autom4te.cache > rm -rf ./config.log > rm -rf ./config.status > rm -rf ./HYPRE_config.h > make[2]: Leaving directory '/<<PKGBUILDDIR>>/src' > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_autoreconf_clean -O--sourcedirectory=src > debian/rules override_dh_clean > make[1]: Entering directory '/<<PKGBUILDDIR>>' > dh_clean > rm -rf src64 src64m > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dpkg-source -b . > dpkg-source: info: using source format '3.0 (quilt)' > dpkg-source: info: building hypre using existing ./hypre_2.28.0.orig.tar.gz > dpkg-source: info: using patch list from debian/patches/series > dpkg-source: warning: ignoring deletion of file src/config/config.sub, use --include-removal to override > dpkg-source: warning: ignoring deletion of file src/config/config.guess, use --include-removal to override > dpkg-source: error: cannot represent change to src-static/IJ_mv/F90_HYPRE_IJMatrix.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/F90_HYPRE_IJMatrix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/F90_HYPRE_IJVector.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/F90_HYPRE_IJVector.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/F90_IJMatrix.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/F90_IJMatrix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/HYPRE_IJMatrix.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/HYPRE_IJMatrix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/HYPRE_IJVector.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/HYPRE_IJVector.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJMatrix.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJMatrix.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJMatrix_parcsr.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJMatrix_parcsr.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJMatrix_parcsr_device.obj: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJMatrix_parcsr_device.obj in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJVector.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJVector.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJVector_parcsr.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJVector_parcsr.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJVector_parcsr_device.obj: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJVector_parcsr_device.obj in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/IJ_assumed_part.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/IJ_assumed_part.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/aux_par_vector.o: binary file contents changed > dpkg-source: error: add src-static/IJ_mv/aux_par_vector.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src-static/IJ_mv/aux_parcsr_matrix.o: binary file contents changed [...] > dpkg-source: error: add src64m-static/utilities/qsort.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src64m-static/utilities/qsplit.o: binary file contents changed > dpkg-source: error: add src64m-static/utilities/qsplit.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src64m-static/utilities/random.o: binary file contents changed > dpkg-source: error: add src64m-static/utilities/random.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src64m-static/utilities/threading.o: binary file contents changed > dpkg-source: error: add src64m-static/utilities/threading.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src64m-static/utilities/timer.o: binary file contents changed > dpkg-source: error: add src64m-static/utilities/timer.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src64m-static/utilities/timing.o: binary file contents changed > dpkg-source: error: add src64m-static/utilities/timing.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: error: cannot represent change to src64m-static/utilities/utilities.o: binary file contents changed > dpkg-source: error: add src64m-static/utilities/utilities.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball > dpkg-source: warning: executable mode 0755 of 'src64m-static/utilities/version.sh' will not be represented in diff > dpkg-source: error: unrepresentable changes to source > dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 1 > > E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run. The full build log is available from: http://qa-logs.debian.net/2023/08/13/hypre_2.28.0-6_unstable.log If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime. ]