[From nobody Sat Aug 8 18:51:06 2026 Received: (at submit) by bugs.debian.org; 28 Feb 2026 17:01:48 +0000 X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02 (2024-03-25) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-105.1 required=4.0 tests=BAYES_00,DKIMWL_WL_HIGH, DKIM_SIGNED,DKIM_VALID,DKIM_VALID_AU,DKIM_VALID_EF,FOURLA, FROMDEVELOPER,SPF_HELO_NONE,SPF_NONE,UNPARSEABLE_RELAY, USER_IN_DKIM_WELCOMELIST autolearn=ham autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 36; hammy, 150; neutral, 66; spammy, 0. spammytokens: hammytokens:0.000-+--Hx-spam-relays-external:sk:stravin, 0.000-+--H*RT:sk:stravin, 0.000-+--Hx-spam-relays-external:311, 0.000-+--H*RT:311, 0.000-+--H*RT:108 Return-path: <ginggs@debian.org> Received: from stravinsky.debian.org ([2001:41b8:202:deb::311:108]:52958) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <ginggs@debian.org>) id 1vwNhM-00BnXG-0d for submit@bugs.debian.org; Sat, 28 Feb 2026 17:01:48 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.stravinsky; h=X-Debian-User:Content-Type:To:Subject:Message-ID: Date:From:MIME-Version:Reply-To:Cc:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=hEVfx1LNYx8IxjeKFARVSQhcJ6QTb5eSk7qm+9+8pr0=; b=By1PCOGKAfHGWjVLu4QqybPuU2 6X2IkXrXN82IMxvMsEpquwDPojr3pw8kR7cUyrxYMpiZYPQiY1mH3exkUZbcm0/aozkJ6dG+GMdCk 5EtbR4JkAePr9IqyQ4+Smyx2TaqINWHaPytfhQF4Mc+NEpOKh+dL+d1UT0ei5tXESa9Y3tGrenNHV b85amgNb4KY939OyvU9y2GrcEYxcO+wtkcIgCl46li4pGjEnlxhriyEjHLeji8dVCTQdw0+gSlSgo wW7Hf0EmEqpVfHD4oE3dqTD4vVuyEdMEdHsfwWXaZM6MkeOOLFzrcXJIE7CJ79k5q4OKmH/SgbDiP x1IjFfdA==; Received: from authenticated user by stravinsky.debian.org with esmtpsa (TLS1.3:ECDHE_X25519__RSA_PSS_RSAE_SHA256__AES_128_GCM:128) (Exim 4.94.2) (envelope-from <ginggs@debian.org>) id 1vwNhK-00D0Go-Bu for submit@bugs.debian.org; Sat, 28 Feb 2026 17:01:46 +0000 Received: by mail-vk1-f172.google.com with SMTP id 71dfb90a1353d-56ab66120cfso4943e0c.1 for <submit@bugs.debian.org>; Sat, 28 Feb 2026 09:01:46 -0800 (PST) X-Gm-Message-State: AOJu0YzPm/gKC5Tw2G/XVium1MDglFg+Ap5fBTqfAe+VgMLYl77ubuwT YnnNxmtSI9DvBNVMSzjq0Re2SZQKcx2BQBVhuoqM6CiX7oV4cchQmwG7Pvj6y2GGbEL4FBrk4kK REv4d/re0F9MOAivoS7YANH64vd5BCvo= X-Received: by 2002:ac5:c890:0:b0:567:466c:6657 with SMTP id 71dfb90a1353d-56aa0a964d2mr1473867e0c.2.1772298104509; Sat, 28 Feb 2026 09:01:44 -0800 (PST) MIME-Version: 1.0 From: Graham Inggs <ginggs@debian.org> Date: Sat, 28 Feb 2026 16:01:33 -0100 X-Gmail-Original-Message-ID: <CAM8zJQu50zF0HKvYWhGKNGQWvKv41WOmJLw=1KurjLtc1OtXJg@mail.gmail.com> X-Gm-Features: AaiRm51FEB1UxdUZFmKjL9a9JOp3J7KxuTYS5gn3Rkk3GMAkfbaPZdiXkNNRTP0 Message-ID: <CAM8zJQu50zF0HKvYWhGKNGQWvKv41WOmJLw=1KurjLtc1OtXJg@mail.gmail.com> Subject: openstructure: FTBFS with Python 3.14: tests segfault To: Debian Bug Tracking System <submit@bugs.debian.org> Content-Type: text/plain; charset="UTF-8" X-Debian-User: ginggs Delivered-To: submit@bugs.debian.org Source: openstructure Version: 2.11.1-1 Severity: important Tags: ftbfs forky sid User: debian-python@lists.debian.org Usertags: python3.14 Hi Maintainer openstructure will FTBFS once Python 3.14 is the default version in Debian due to segmentation faults in the tests. I've copied the output from a failing autopkgtest log below, as a build log is even less helpful. Regards Graham 454s autopkgtest [16:06:47]: test python: [----------------------- 454s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5017 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5024 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5026 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/modules/bindings/tests/test_blast.py:81: SyntaxWarning: "\d" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\d"? A raw string is also an option. 455s re_v = re.compile('\d+\.\d+\.\d+') 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5029 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5031 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5033 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5035 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5037 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5039 Segmentation fault (core dumped) python3 ${TEST} 455s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5041 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5043 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5045 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5047 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5049 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5051 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5054 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5056 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5058 Segmentation fault (core dumped) python3 ${TEST} 456s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5060 Segmentation fault (core dumped) python3 ${TEST} 457s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5063 Segmentation fault (core dumped) python3 ${TEST} 457s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5066 Segmentation fault (core dumped) python3 ${TEST} 457s Traceback (most recent call last): 457s File "/tmp/autopkgtest.61Ffy1/build.0c8/src/modules/gfx/tests/test_entity.py", line 1, in <module> 457s eh=io.LoadPDB("1crn",remote=True) 457s ^^ 457s NameError: name 'io' is not defined. Did you mean: 'id'? Or did you forget to import 'io'? 457s /tmp/autopkgtest.61Ffy1/build.0c8/src/debian/tests/python: line 8: 5070 Segmentation fault (core dumped) python3 ${TEST} 457s Traceback (most recent call last): 457s File "/tmp/autopkgtest.61Ffy1/build.0c8/src/modules/gfx/tests/test_gost_export.py", line 1, in <module> 457s import desost_util as util 457s ModuleNotFoundError: No module named 'desost_util' 457s Traceback (most recent call last): 457s File "/tmp/autopkgtest.61Ffy1/build.0c8/src/modules/gfx/tests/test_gost_import.py", line 3, in <module> 457s with open("test.gost","rb") as gf: 457s ~~~~^^^^^^^^^^^^^^^^^^ 457s FileNotFoundError: [Errno 2] No such file or directory: 'test.gost' ]