[From nobody Wed Aug 19 12:59:06 2026 Received: (at submit) by bugs.debian.org; 13 Aug 2023 20:04:40 +0000 X-Spam-Checker-Version: SpamAssassin 3.4.6-bugs.debian.org_2005_01_02 (2021-04-09) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-103.2 required=4.0 tests=ATTENDEES_DBSPAM_BODY3, ATTENDEES_DBSPAM_BODY7,BAYES_00,DKIMWL_WL_HIGH,DKIM_SIGNED,DKIM_VALID, DKIM_VALID_AU,DKIM_VALID_EF,FROMDEVELOPER,FVGT_m_MULTI_ODD, MURPHY_DRUGS_REL8,SPF_HELO_NONE,SPF_NONE,UNPARSEABLE_RELAY, USER_IN_DKIM_WELCOMELIST,USER_IN_DKIM_WHITELIST autolearn=ham autolearn_force=no version=3.4.6-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 22; hammy, 150; neutral, 165; spammy, 0. spammytokens: hammytokens:0.000-+--UD:orig.tar.xz, 0.000-+--pkgbuilddir, 0.000-+--PKGBUILDDIR, 0.000-+--Hx-spam-relays-external:sk:stravin, 0.000-+--H*RT:sk:stravin Return-path: <lucas@debian.org> Received: from stravinsky.debian.org ([2001:41b8:202:deb::311:108]:45730) from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA, CN=stravinsky.debian.org, EMAIL=hostmaster@stravinsky.debian.org (verified) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.94.2) (envelope-from <lucas@debian.org>) id 1qVHKL-003zR5-Cj for submit@bugs.debian.org; Sun, 13 Aug 2023 20:04:39 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.stravinsky; h=X-Debian-User:Message-Id:Date:Subject:To:From: Reply-To:Cc:MIME-Version:Content-Type:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=9iWZYdQ7TnfbgNz4l5GyMjV2a0Je/7wwztgGufiAb3Y=; b=ncIJnL+sWX1BlUlr+GYHbT8i+E UCzgaizlqEbKrIsk6va7JD3PimP3RCwUTW2n8CgKcFnJOhp/Z9mbslsa84as2Udasyb+EIxDKO907 LselzCbuMjUtjcAmhdXvICplCKw0PLgtwIr1cthNuCrty6N7qE2sLKcupPIGtX9wzLsK5+45int9R 1hDTWq8QVWwTLRLyQx9jkwAzHjKbWQ40iF1fTzhloMuyYZxyaW9sdVoe2PtIPZGV271RYhsHhNkAh iP0jqxxljwOuTXeCcoAojJCdEedUE93m8X/yEtC56gl3G2LbmQp+XTfurADRhlXO7gXjTaO+qGcHC YSVJ04+A==; Received: from authenticated user by stravinsky.debian.org with esmtpsa (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.94.2) (envelope-from <lucas@debian.org>) id 1qVHKJ-001tKH-Dq for submit@bugs.debian.org; Sun, 13 Aug 2023 20:04:38 +0000 From: Lucas Nussbaum <lucas@debian.org> To: submit@bugs.debian.org Subject: pymatgen: Fails to build source after successful build Date: Sun, 13 Aug 2023 21:21:08 +0200 Message-Id: <1691954468.998491.1280856.nullmailer@grub.nussbaum.fr> X-Debian-User: lucas Delivered-To: submit@bugs.debian.org Source: pymatgen Version: 2023.06.23+dfsg1-2 Severity: minor Tags: trixie sid ftbfs User: lucas@debian.org Usertags: ftbfs-sab-20230813 ftbfs-source-after-build User: debian-qa@lists.debian.org Usertags: qa-doublebuild Hi, This package fails to build a source package after a successful build (dpkg-buildpackage ; dpkg-buildpackage -S). This is probably a clear violation of Debian Policy section 4.9 (clean target), but this is filed as severity:minor for now, because a discussion on debian-devel showed that we might want to revisit the requirement of a working 'clean' target. More information about this class of issues, included common problems and solutions, is available at https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild Relevant part of the build log: > cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S > ---------------------------------------------------------------------------------------------------------------------------------- > > dpkg-buildpackage: info: source package pymatgen > dpkg-buildpackage: info: source version 2023.06.23+dfsg1-2 > dpkg-buildpackage: info: source distribution unstable > dpkg-buildpackage: info: source changed by Drew Parsons <dparsons@debian.org> > dpkg-source --before-build . > dpkg-source: info: using options from pymatgen-2023.06.23+dfsg1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ > fakeroot debian/rules clean > dh clean --buildsystem=pybuild > dh_auto_clean -O--buildsystem=pybuild > debian/rules execute_after_dh_auto_clean > make[1]: Entering directory '/<<PKGBUILDDIR>>' > rm -f pymatgen/optimization/linear_assignment.c pymatgen/optimization/neighbors.c pymatgen/util/coord_cython.c > make[1]: Leaving directory '/<<PKGBUILDDIR>>' > dh_autoreconf_clean -O--buildsystem=pybuild > dh_clean -O--buildsystem=pybuild > dpkg-source -b . > dpkg-source: info: using options from pymatgen-2023.06.23+dfsg1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ > dpkg-source: info: using source format '3.0 (quilt)' > dpkg-source: info: building pymatgen using existing ./pymatgen_2023.06.23+dfsg1.orig.tar.xz > dpkg-source: info: using patch list from debian/patches/series > dpkg-source: warning: file pymatgen-2023.06.23+dfsg1/pd.json has no final newline (either original or modified version) > dpkg-source: info: local changes detected, the modified files are: > pymatgen-2023.06.23+dfsg1/pd.json > dpkg-source: error: aborting due to unexpected upstream changes, see /tmp/pymatgen_2023.06.23+dfsg1-2.diff.kuCxvZ > dpkg-source: info: Hint: make sure the version in debian/changelog matches the unpacked source tree > dpkg-source: info: you can integrate the local changes with dpkg-source --commit > dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 2 > > E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run. The full build log is available from: http://qa-logs.debian.net/2023/08/13/pymatgen_2023.06.23+dfsg1-2_unstable.log If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime. ]