[Neurodebian-users] Configuring FSL

Benjamin Kay benjamin at benkay.net
Fri Feb 10 19:43:20 UTC 2012


If you have root access to the machine and want to configure FSL to work for 
all users then I recommend the following:

$ sudo ln -s /etc/fsl/fsl.sh /etc/profile.d/fsl.sh
$ sudo echo /usr/lib/fsl/4.1 > /etc/ld.so.conf.d/fsl.conf
$ sudo ldconfig

Log out, log back in, and fsl should work.

On Friday, February 10, 2012 14:34:09 Assal Habibi wrote:
> Hi,
> 
> I have downloaded (using synaptic package manager) and installed FSL but
> having trouble with configuration. As instructed on FSL website, I copied
> and pasted the following lines of commands  in the shell setup files. I
> tried .bashrc, .profile, .cshrc but none of them worked.  The error line
> is: fsl: command not found. Does anyone know hot to fix it?
> 
> 
> FSLDIR=/usr/local/fsl
> . ${FSLDIR}/etc/fslconf/fsl.sh
> PATH=${FSLDIR}/bin:${PATH}
> export FSLDIR PATH
> 
> Thank you,
> Assal
> 
> 
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