[pymvpa] running pyMVPA in the virtual unix

Michael Hanke michael.hanke at gmail.com
Fri Dec 19 07:51:48 UTC 2008


Hi Yune,

On Wed, Dec 17, 2008 at 10:49:51PM +0100, Michael Hanke wrote:
> >> What is 'extremely slow' in seconds (or minutes)? ;-) I've been running 
> >> Tiny example of full-cross validation for the last half an hour and am 
> >> still in the middle (dataset=datset.selectSamples( ....) So, I guess it 
> >> is pretty slow, right? Having said that, how long does it usually take 
> >> to go through this example?   
> It should take some seconds -- maybe 5.
You haven't replied yet -- did you resolve the problem? If so, please
tell us what the problem was, so we can document it properly. thanks.


> >> still in the middle (dataset=datset.selectSamples( ....) So, I guess it 
                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
I just now realized what command took so long to execute. It doesn't
even involve a classifier, and should be finished within fractions of a
second. If you are still seeing this behavior please do a

	print dataset

right _before_ the 'detrend' call and post the output, please.

Michael


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