[pymvpa] LinearCSVMC module not found

[Nick Oosterhof]

> On 24 Sep 2015, at 19:56, Liang, Guangsheng <guangsheng.liang at ttu.edu> wrote:
> 
> The .so files are found in site-packages/mvpa2/clfs file.
> Strange thing is, even those files are in the mvpa2 module, when I called out mvpa2.wtf(), it shows that libsvm has not been loaded yet. I used ‘from mvpa2.suite import *’ to load the module.

That's a bit strange. You are not able to use the SVM classifier then? If not, what happens if you run svm_margin.py in doc/examples?
> 
> There are two warnings when I loaded the module, and not sure if those could help:
> 
> /Users/tumo/anaconda/lib/python2.7/site-packages/numpy/lib/utils.py:95: DeprecationWarning: `scipy.weave` is deprecated, use `weave` instead!
> warnings.warn(depdoc, DeprecationWarning)
> /Users/tumo/anaconda/lib/python2.7/site-packages/numpy/lib/utils.py:95: DeprecationWarning: `scipy.linalg.calc_lwork` is deprecated!
> 
> 
> calc_lwork was an internal module in Scipy and has been removed.
> 
> 
> Several functions in scipy.linalg.lapack have *_lwork variants
> that perform the lwork calculation (from Scipy >= 0.15.0), or
> allow passing in LWORK=-1 argument to perform the computation.

I don't get those warnings, but looking at your wtf() output it seems your packages are quite recent. It does not seem to me that this would be the cause of SVM not working (but I could be wrong).