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<p style="margin-top:0; margin-bottom:0">Dear users,</p>
<p style="margin-top:0; margin-bottom:0"><br>
</p>
<p style="margin-top:0; margin-bottom:0">I'm trying to run some of the tutorials provided at <a href="http://www.pymvpa.org/tutorial.html" class="OWAAutoLink" id="LPlnk623449" previewremoved="true">http://www.pymvpa.org/tutorial.html</a>, however I'm having
 trouble importing/accessing the tutorial data. For example, when using:</p>
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<div><span style="font-family:"Courier New",monospace"><br>
</span></div>
<div><span style="font-family:"Courier New",monospace; font-size:12pt">from mvpa2.datasets.sources.native import load_tutorial_data</span><br>
</div>
<div><span style="font-family:"Courier New",monospace; font-size:12pt">ds = load_tutorial_data(roi=(15, 16, 23, 24, 36, 38, 39, 40, 48))</span><br>
</div>
<br>
<p></p>
I get the following error:
<div>
<pre style="box-sizing:border-box; overflow:auto; font-size:14px; padding:1px 0px; margin-top:0px; margin-bottom:0px; line-height:inherit; word-break:break-all; word-wrap:break-word; border:0px; border-radius:0px; white-space:pre-wrap; vertical-align:baseline"><span class="ansi-red-fg" style="box-sizing:border-box; color:rgb(231,92,88); font-family:"Courier New",monospace">FileNotFoundError</span><span style="font-family:"Courier New",monospace">                         Traceback (most recent call last)
</span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace"><ipython-input-5-aa73ed9c4756></span><span style="font-family:"Courier New",monospace"> in </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace"><module></span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">()</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">      2</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">from</span><span style="font-family:"Courier New",monospace"> mvpa2</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">datasets</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">sources</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">native </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">import</span><span style="font-family:"Courier New",monospace"> load_tutorial_data
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">      3</span><span style="font-family:"Courier New",monospace"> datapath </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span style="font-family:"Courier New",monospace"> pjoin</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">cfg</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">get</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">'location'</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">'tutorial data'</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">'haxby2001'</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">----> 4</span><span class="ansi-red-fg" style="box-sizing:border-box; color:rgb(231,92,88); font-family:"Courier New",monospace"> </span><span style="font-family:"Courier New",monospace">ds </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span style="font-family:"Courier New",monospace"> load_tutorial_data</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">roi</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">15</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">16</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">23</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">24</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">36</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">38</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">39</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">40</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">48</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">

</span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">/home/lyam/anaconda2/lib/python2.7/site-packages/mvpa2/datasets/sources/native.pyc</span><span style="font-family:"Courier New",monospace"> in </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">load_tutorial_data</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(path, roi, add_fa, flavor)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">    113</span><span style="font-family:"Courier New",monospace">         mask </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span style="font-family:"Courier New",monospace"> nb</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">Nifti1Image</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">tmpmask</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">astype</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">int</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> nimg</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">affine</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> nimg</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">header</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">    114</span><span style="font-family:"Courier New",monospace">     </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">elif</span><span style="font-family:"Courier New",monospace"> isinstance</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">roi</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">tuple</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> list</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">:</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">--> 115</span><span class="ansi-red-fg" style="box-sizing:border-box; color:rgb(231,92,88); font-family:"Courier New",monospace">         </span><span style="font-family:"Courier New",monospace">nimg </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span style="font-family:"Courier New",monospace"> nb</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">load</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">pathjoin</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">maskpath</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">'hoc.nii.gz'</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">    116</span><span style="font-family:"Courier New",monospace">         tmpmask </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span style="font-family:"Courier New",monospace"> np</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">zeros</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">nimg</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">shape</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">,</span><span style="font-family:"Courier New",monospace"> dtype</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">'bool'</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">    117</span><span style="font-family:"Courier New",monospace">         </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">for</span><span style="font-family:"Courier New",monospace"> r </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">in</span><span style="font-family:"Courier New",monospace"> roi</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">:</span><span style="font-family:"Courier New",monospace">

</span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">/home/lyam/anaconda2/lib/python2.7/site-packages/nibabel/loadsave.pyc</span><span style="font-family:"Courier New",monospace"> in </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">load</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(filename, **kwargs)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">     40</span><span style="font-family:"Courier New",monospace">         stat_result </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">=</span><span style="font-family:"Courier New",monospace"> os</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">stat</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span style="font-family:"Courier New",monospace">filename</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">     41</span><span style="font-family:"Courier New",monospace">     </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">except</span><span style="font-family:"Courier New",monospace"> OSError</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">:</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">---> 42</span><span class="ansi-red-fg" style="box-sizing:border-box; color:rgb(231,92,88); font-family:"Courier New",monospace">         </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">raise</span><span style="font-family:"Courier New",monospace"> FileNotFoundError</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">"No such file or no access: '%s'"</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">%</span><span style="font-family:"Courier New",monospace"> filename</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">     43</span><span style="font-family:"Courier New",monospace">     </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">if</span><span style="font-family:"Courier New",monospace"> stat_result</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">.</span><span style="font-family:"Courier New",monospace">st_size </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace"><=</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-cyan-fg" style="box-sizing:border-box; color:rgb(96,198,200); font-family:"Courier New",monospace">0</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">:</span><span style="font-family:"Courier New",monospace">
</span><span class="ansi-green-intense-fg ansi-bold" style="box-sizing:border-box; color:rgb(0,116,39); font-weight:bold; font-family:"Courier New",monospace">     44</span><span style="font-family:"Courier New",monospace">         </span><span class="ansi-green-fg" style="box-sizing:border-box; color:rgb(0,162,80); font-family:"Courier New",monospace">raise</span><span style="font-family:"Courier New",monospace"> ImageFileError</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">(</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">"Empty file: '%s'"</span><span style="font-family:"Courier New",monospace"> </span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">%</span><span style="font-family:"Courier New",monospace"> filename</span><span class="ansi-blue-fg" style="box-sizing:border-box; color:rgb(32,143,251); font-family:"Courier New",monospace">)</span><span style="font-family:"Courier New",monospace">

</span><span class="ansi-red-fg" style="box-sizing:border-box; color:rgb(231,92,88); font-family:"Courier New",monospace">FileNotFoundError</span><span style="font-family:"Courier New",monospace">: No such file or no access: './haxby2001/sub001/masks/orig/hoc.nii.gz'</span></pre>
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<p style="margin-top:0; margin-bottom:0">Clearly I can't access the data, but beyond that I'm not sure what's going on. Does anybody know what's going wrong here, and/or how to fix the problem?</p>
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<p style="margin-top:0; margin-bottom:0">Regards</p>
<p style="margin-top:0; margin-bottom:0">Lyam</p>
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<p><span style="color:rgb(0,0,0); font-family:arial,sans-serif; font-size:12.8px"><b>Lyam Bailey, B.Sc., M.Sc. </b></span></p>
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