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<h3>
Antonio Valentino pushed to branch upstream
at <a href="https://salsa.debian.org/debian-gis-team/trollimage">Debian GIS Project / trollimage</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/debian-gis-team/trollimage/commit/54d7955b35df379cc486e39a76882e332445c14d">54d7955b</a></strong>
<div>
<span>by Antonio Valentino</span>
<i>at 2019-10-28T06:53:00Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.11.0</pre>
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<h4>6 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
</a>
</li>
<li class="file-stats">
<a href="#43b9d80d1f50472e56afb94a061257af5b53182b">
appveyor.yml
</a>
</li>
<li class="file-stats">
<a href="#fce890330b3c272d86577ba57489d948b090631b">
trollimage/tests/test_image.py
</a>
</li>
<li class="file-stats">
<a href="#380301af31f9d6940547a045145fcdc5b4d39ad6">
trollimage/version.py
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</li>
<li class="file-stats">
<a href="#028e65b6d0864e05bce4d228e1169e003b4b4566">
trollimage/xrimage.py
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</li>
</ul>
<h4>Changes:</h4>
<li id="dea01dd89a3b602828e630677fde5d77c06441c8">
<a href="https://salsa.debian.org/debian-gis-team/trollimage/commit/54d7955b35df379cc486e39a76882e332445c14d#dea01dd89a3b602828e630677fde5d77c06441c8"><strong>.travis.yml</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="yaml"><span class="na" style="color: #008080;">language</span><span class="pi">:</span> <span class="s" style="color: #d14;">python</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">python</span><span class="pi">:</span></span>
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<td class="diff-line-num new_line old" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="yaml"><span class="pi">-</span> <span class="s1" style="color: #d14;">'</span><span class="s" style="color: #d14;">2.7'</span></span>
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<td class="diff-line-num new_line old" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="yaml"><span class="pi">-</span> <span class="s1" style="color: #d14;">'</span><span class="s" style="color: #d14;">3.6'</span></span>
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<td class="diff-line-num new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>
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<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="yaml"> <span class="na" style="color: #008080;">global</span><span class="pi">:</span></span>
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="yaml"> <span class="c1" style="color: #998; font-style: italic;"># Set defaults to avoid repeating in most cases</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -15,8 +12,19 @@ env:</td>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">CONDA_CHANNELS='conda-forge'</span></span>
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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">CONDA_CHANNEL_PRIORITY=True</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="yaml"></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="yaml"><span class="na" style="color: #008080;">matrix</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="yaml"> <span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">PYTHON_VERSION=2.7</span></span>
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<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">NUMPY_VERSION=1.16</span></span>
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<td class="diff-line-num new new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="yaml"> <span class="na" style="color: #008080;">os</span><span class="pi">:</span> <span class="s" style="color: #d14;">linux</span></span>
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<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">env</span><span class="pi">:</span> <span class="s" style="color: #d14;">PYTHON_VERSION=3.6</span></span>
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<td class="diff-line-num new new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="yaml"> <span class="na" style="color: #008080;">os</span><span class="pi">:</span> <span class="s" style="color: #d14;">linux</span></span>
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<td class="diff-line-num new new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">env</span><span class="pi">:</span> <span class="s" style="color: #d14;">PYTHON_VERSION=3.7</span></span>
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<td class="diff-line-num new new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="yaml"> <span class="na" style="color: #008080;">os</span><span class="pi">:</span> <span class="s" style="color: #d14;">linux</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="yaml"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="yaml"><span class="na" style="color: #008080;">install</span><span class="pi">:</span></span>
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19
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">git clone --depth 1 <span class="idiff left right">-b all-the-fixes git://github.com/djhoese</span>/ci-helpers.git</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">git clone --depth 1 <span class="idiff left right">git://github.com/astropy</span>/ci-helpers.git</span></span>
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20
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">source ci-helpers/travis/setup_conda.sh</span></span>
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21
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<td class="diff-line-num new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="yaml"><span class="na" style="color: #008080;">script</span><span class="pi">:</span> <span class="s" style="color: #d14;">coverage run --source=trollimage setup.py test</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="yaml"><span class="na" style="color: #008080;">after_success</span><span class="pi">:</span></span>
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<br>
</li>
<li id="ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
<a href="https://salsa.debian.org/debian-gis-team/trollimage/commit/54d7955b35df379cc486e39a76882e332445c14d#ab09011fa121d0a2bb9fa4ca76094f2482b902b7"><strong>CHANGELOG.md</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="markdown"><span class="gu" style="color: #800080; font-weight: 600;">## Version 1.11.0 (2019/10/24)</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="markdown"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="markdown"><span class="gu" style="color: #800080; font-weight: 600;">### Pull Requests Merged</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="markdown"></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="markdown"><span class="gu" style="color: #800080; font-weight: 600;">#### Bugs fixed</span></span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="markdown"></span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="markdown"><span class="p">*</span> <span class="p">[</span><span class="nv" style="color: #008080;">PR 58</span><span class="p">](</span><span class="sx" style="color: #d14;">https://github.com/pytroll/trollimage/pull/58</span><span class="p">)</span> - Make tags containing values to compute use store for saving</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="markdown"></span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="markdown"><span class="gu" style="color: #800080; font-weight: 600;">#### Features added</span></span>
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10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="markdown"></span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="markdown"><span class="p">*</span> <span class="p">[</span><span class="nv" style="color: #008080;">PR 60</span><span class="p">](</span><span class="sx" style="color: #d14;">https://github.com/pytroll/trollimage/pull/60</span><span class="p">)</span> - Add tests on py 3.7</span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="markdown"><span class="p">*</span> <span class="p">[</span><span class="nv" style="color: #008080;">PR 59</span><span class="p">](</span><span class="sx" style="color: #d14;">https://github.com/pytroll/trollimage/pull/59</span><span class="p">)</span> - Add scale and offset inclusion utility when rio saving</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="markdown"><span class="p">*</span> <span class="p">[</span><span class="nv" style="color: #008080;">PR 57</span><span class="p">](</span><span class="sx" style="color: #d14;">https://github.com/pytroll/trollimage/pull/57</span><span class="p">)</span> - Add the <span class="sb" style="color: #d14;">`apply_pil`</span> method</span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="markdown"></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="markdown">In this release 4 pull requests were closed.</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="markdown"></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="markdown"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="markdown"><span class="gu" style="color: #800080; font-weight: 600;">## Version 1.10.1 (2019/09/26)</span></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="markdown"></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="markdown"><span class="gu" style="color: #800080; font-weight: 600;">### Pull Requests Merged</span></span>
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<a href="https://salsa.debian.org/debian-gis-team/trollimage/commit/54d7955b35df379cc486e39a76882e332445c14d#43b9d80d1f50472e56afb94a061257af5b53182b"><strong>appveyor.yml</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -18,9 +18,13 @@ environment:</td>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="yaml"> <span class="na" style="color: #008080;">PYTHON_ARCH</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">64"</span></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="yaml"> <span class="na" style="color: #008080;">NUMPY_VERSION</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">stable"</span></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="yaml"></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">C:</span><span class="se" style="color: #d14;">\\</span><span class="s" style="color: #d14;">Python37_64"</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="yaml"> <span class="na" style="color: #008080;">PYTHON_VERSION</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">3.7"</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="yaml"> <span class="na" style="color: #008080;">PYTHON_ARCH</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">64"</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="yaml"> <span class="na" style="color: #008080;">NUMPY_VERSION</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">stable"</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="yaml"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="yaml"><span class="na" style="color: #008080;">install</span><span class="pi">:</span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="yaml"><span class="c1" style="color: #998; font-style: italic;"># - "git clone --depth 1 git://github.com/astropy/ci-helpers.git"</span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="yaml"> <span class="pi">-</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">git</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">clone</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">--depth</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">1</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">-b</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">all-the-fixes</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">git://github.com/djhoese/ci-helpers.git"</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="yaml"> <span class="pi">-</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">git</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">clone</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">--depth</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">1</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">git://github.com/astropy/ci-helpers.git"</span></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="yaml"> <span class="pi">-</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">powershell</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">ci-helpers/appveyor/install-miniconda.ps1"</span></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="yaml"> <span class="pi">-</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">conda</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">activate</span><span class="nv" style="color: #008080;"> </span><span class="s" style="color: #d14;">test"</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="yaml"></span>
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<a href="https://salsa.debian.org/debian-gis-team/trollimage/commit/54d7955b35df379cc486e39a76882e332445c14d#fce890330b3c272d86577ba57489d948b090631b"><strong>trollimage/tests/test_image.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -23,12 +23,15 @@</td>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># along with mpop. If not, see <http://www.gnu.org/licenses/>.</span></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"><span class="s" style="color: #d14;">"""Module for testing the image and xrimage modules."""</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">os</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">random</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;"><span class="idiff left right">unittest</span></span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;"><span class="idiff left right">sys</span></span></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">tempfile</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">unittest</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">collections</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">OrderedDict</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tempfile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">NamedTemporaryFile</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">np</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">trollimage</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">image</span></span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -958,7 +961,7 @@ class TestXRImage(unittest.TestCase):</td>
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<pre style="margin: 0;"> <span id="LC961" class="line" lang="python"> <span class="n" style="color: #333;">delay</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">compute</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC962" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">tuple</span><span class="p">)</span></span>
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963
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<pre style="margin: 0;"> <span id="LC963" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">],</span> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Array</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC961" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">],</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RIO<span class="idiff left right">File</span></span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC964" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">],</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RIO<span class="idiff left right">Dataset</span></span><span class="p">)</span></span>
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962
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965
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<pre style="margin: 0;"> <span id="LC965" class="line" lang="python"> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">store</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">delay</span><span class="p">)</span></span>
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963
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966
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<pre style="margin: 0;"> <span id="LC966" class="line" lang="python"> <span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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964
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967
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<pre style="margin: 0;"> <span id="LC967" class="line" lang="python"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1031,7 +1034,7 @@ class TestXRImage(unittest.TestCase):</td>
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1031
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1034
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<pre style="margin: 0;"> <span id="LC1034" class="line" lang="python"> <span class="n" style="color: #333;">delay</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">compute</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">)</span></span>
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1032
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1035
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<pre style="margin: 0;"> <span id="LC1035" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">tuple</span><span class="p">)</span></span>
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1033
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1036
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<pre style="margin: 0;"> <span id="LC1036" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">],</span> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Array</span><span class="p">)</span></span>
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1034
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<pre style="margin: 0;">-<span id="LC1034" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">],</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RIO<span class="idiff left right">File</span></span><span class="p">)</span></span>
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1037
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<pre style="margin: 0;">+<span id="LC1037" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertIsInstance</span><span class="p">(</span><span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">],</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RIO<span class="idiff left right">Dataset</span></span><span class="p">)</span></span>
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1035
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1038
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<pre style="margin: 0;"> <span id="LC1038" class="line" lang="python"> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">store</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">delay</span><span class="p">)</span></span>
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1036
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1039
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<pre style="margin: 0;"> <span id="LC1039" class="line" lang="python"> <span class="n" style="color: #333;">delay</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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1037
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1040
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<pre style="margin: 0;"> <span id="LC1040" class="line" lang="python"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1198,6 +1201,44 @@ class TestXRImage(unittest.TestCase):</td>
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1198
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1201
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<pre style="margin: 0;"> <span id="LC1201" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">rio</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">f</span><span class="p">:</span></span>
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1202
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<pre style="margin: 0;"> <span id="LC1202" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertEqual</span><span class="p">(</span><span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">f</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">)),</span> <span class="mi" style="color: #099;">2</span><span class="p">)</span></span>
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1200
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1203
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<pre style="margin: 0;"> <span id="LC1203" class="line" lang="python"></span>
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1204
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<pre style="margin: 0;">+<span id="LC1204" class="line" lang="python"> <span class="o" style="font-weight: 600;">@</span><span class="n" style="color: #333;">unittest</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">skipIf</span><span class="p">(</span><span class="n" style="color: #333;">sys</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">platform</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">startswith</span><span class="p">(</span><span class="s" style="color: #d14;">'win'</span><span class="p">),</span> <span class="s" style="color: #d14;">"'NamedTemporaryFile' not supported on Windows"</span><span class="p">)</span></span>
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1205
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<pre style="margin: 0;">+<span id="LC1205" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_save_tags</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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1206
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<pre style="margin: 0;">+<span id="LC1206" class="line" lang="python"> <span class="s" style="color: #d14;">"""Test saving geotiffs with tags."""</span></span>
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1207
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<pre style="margin: 0;">+<span id="LC1207" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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1208
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<pre style="margin: 0;">+<span id="LC1208" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">trollimage</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">xrimage</span></span>
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<pre style="margin: 0;">+<span id="LC1209" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">rasterio</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">rio</span></span>
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1210
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<pre style="margin: 0;">+<span id="LC1210" class="line" lang="python"></span>
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1211
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<pre style="margin: 0;">+<span id="LC1211" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># numpy array image</span></span>
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1212
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<pre style="margin: 0;">+<span id="LC1212" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">DataArray</span><span class="p">(</span><span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="mi" style="color: #099;">75</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">reshape</span><span class="p">(</span><span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">3</span><span class="p">),</span> <span class="n" style="color: #333;">dims</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1213
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<pre style="margin: 0;">+<span id="LC1213" class="line" lang="python"> <span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'x'</span><span class="p">,</span> <span class="s" style="color: #d14;">'bands'</span><span class="p">],</span> <span class="n" style="color: #333;">coords</span><span class="o" style="font-weight: 600;">=</span><span class="p">{</span><span class="s" style="color: #d14;">'bands'</span><span class="p">:</span> <span class="p">[</span><span class="s" style="color: #d14;">'R'</span><span class="p">,</span> <span class="s" style="color: #d14;">'G'</span><span class="p">,</span> <span class="s" style="color: #d14;">'B'</span><span class="p">]})</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1214
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<pre style="margin: 0;">+<span id="LC1214" class="line" lang="python"> <span class="n" style="color: #333;">img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">XRImage</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1215
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<pre style="margin: 0;">+<span id="LC1215" class="line" lang="python"> <span class="n" style="color: #333;">tags</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="s" style="color: #d14;">'avg'</span><span class="p">:</span> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mean</span><span class="p">(),</span> <span class="s" style="color: #d14;">'current_song'</span><span class="p">:</span> <span class="s" style="color: #d14;">'disco inferno'</span><span class="p">}</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1216
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<pre style="margin: 0;">+<span id="LC1216" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertTrue</span><span class="p">(</span><span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">issubdtype</span><span class="p">(</span><span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span><span class="p">,</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">integer</span><span class="p">))</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1217
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<pre style="margin: 0;">+<span id="LC1217" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">NamedTemporaryFile</span><span class="p">(</span><span class="n" style="color: #333;">suffix</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tmp</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1218
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<pre style="margin: 0;">+<span id="LC1218" class="line" lang="python"> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">tags</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">tags</span><span class="p">)</span></span>
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1219
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<pre style="margin: 0;">+<span id="LC1219" class="line" lang="python"> <span class="n" style="color: #333;">tags</span><span class="p">[</span><span class="s" style="color: #d14;">'avg'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'37.0'</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1220
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<pre style="margin: 0;">+<span id="LC1220" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">rio</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">f</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1221
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<pre style="margin: 0;">+<span id="LC1221" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertEqual</span><span class="p">(</span><span class="n" style="color: #333;">f</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">tags</span><span class="p">(),</span> <span class="n" style="color: #333;">tags</span><span class="p">)</span></span>
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1222
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<pre style="margin: 0;">+<span id="LC1222" class="line" lang="python"></span>
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<td class="diff-line-num new new_line" data-linenumber="1223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1223
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<pre style="margin: 0;">+<span id="LC1223" class="line" lang="python"> <span class="o" style="font-weight: 600;">@</span><span class="n" style="color: #333;">unittest</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">skipIf</span><span class="p">(</span><span class="n" style="color: #333;">sys</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">platform</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">startswith</span><span class="p">(</span><span class="s" style="color: #d14;">'win'</span><span class="p">),</span> <span class="s" style="color: #d14;">"'NamedTemporaryFile' not supported on Windows"</span><span class="p">)</span></span>
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1224
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<pre style="margin: 0;">+<span id="LC1224" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_save_scale_offset</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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1225
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<pre style="margin: 0;">+<span id="LC1225" class="line" lang="python"> <span class="s" style="color: #d14;">"""Test saving geotiffs with tags."""</span></span>
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1226
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<pre style="margin: 0;">+<span id="LC1226" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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1227
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<pre style="margin: 0;">+<span id="LC1227" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">trollimage</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">xrimage</span></span>
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1228
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<pre style="margin: 0;">+<span id="LC1228" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">rasterio</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">rio</span></span>
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1229
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<pre style="margin: 0;">+<span id="LC1229" class="line" lang="python"></span>
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1230
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<pre style="margin: 0;">+<span id="LC1230" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">DataArray</span><span class="p">(</span><span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="mi" style="color: #099;">25</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">reshape</span><span class="p">(</span><span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">),</span> <span class="n" style="color: #333;">dims</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1231
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<pre style="margin: 0;">+<span id="LC1231" class="line" lang="python"> <span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'x'</span><span class="p">,</span> <span class="s" style="color: #d14;">'bands'</span><span class="p">],</span> <span class="n" style="color: #333;">coords</span><span class="o" style="font-weight: 600;">=</span><span class="p">{</span><span class="s" style="color: #d14;">'bands'</span><span class="p">:</span> <span class="p">[</span><span class="s" style="color: #d14;">'L'</span><span class="p">]})</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1232
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<pre style="margin: 0;">+<span id="LC1232" class="line" lang="python"> <span class="n" style="color: #333;">img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">XRImage</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1233
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<pre style="margin: 0;">+<span id="LC1233" class="line" lang="python"> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stretch</span><span class="p">()</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1234
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<pre style="margin: 0;">+<span id="LC1234" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">NamedTemporaryFile</span><span class="p">(</span><span class="n" style="color: #333;">suffix</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tmp</span><span class="p">:</span></span>
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1235
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<pre style="margin: 0;">+<span id="LC1235" class="line" lang="python"> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">include_scale_offset_tags</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">)</span></span>
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1236
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<pre style="margin: 0;">+<span id="LC1236" class="line" lang="python"> <span class="n" style="color: #333;">tags</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="s" style="color: #d14;">'scale'</span><span class="p">:</span> <span class="mf" style="color: #099;">24.0</span> <span class="o" style="font-weight: 600;">/</span> <span class="mi" style="color: #099;">255</span><span class="p">,</span> <span class="s" style="color: #d14;">'offset'</span><span class="p">:</span> <span class="mi" style="color: #099;">0</span><span class="p">}</span></span>
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1237
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<pre style="margin: 0;">+<span id="LC1237" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">rio</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="n" style="color: #333;">tmp</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">f</span><span class="p">:</span></span>
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1238
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<pre style="margin: 0;">+<span id="LC1238" class="line" lang="python"> <span class="n" style="color: #333;">ftags</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">f</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">tags</span><span class="p">()</span></span>
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1239
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<pre style="margin: 0;">+<span id="LC1239" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">key</span><span class="p">,</span> <span class="n" style="color: #333;">val</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tags</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">items</span><span class="p">():</span></span>
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1240
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<pre style="margin: 0;">+<span id="LC1240" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertAlmostEqual</span><span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">ftags</span><span class="p">[</span><span class="n" style="color: #333;">key</span><span class="p">]),</span> <span class="n" style="color: #333;">val</span><span class="p">)</span></span>
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1241
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<pre style="margin: 0;">+<span id="LC1241" class="line" lang="python"></span>
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1201
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1242
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<pre style="margin: 0;"> <span id="LC1242" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_gamma</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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1202
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1243
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<pre style="margin: 0;"> <span id="LC1243" class="line" lang="python"> <span class="s" style="color: #d14;">"""Test gamma correction."""</span></span>
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1203
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1244
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<pre style="margin: 0;"> <span id="LC1244" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1612" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1653" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1612,6 +1653,18 @@ class TestXRImage(unittest.TestCase):</td>
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1612
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1653
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<pre style="margin: 0;"> <span id="LC1653" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertTrue</span><span class="p">(</span><span class="n" style="color: #333;">img2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">'RGBA'</span><span class="p">)</span></span>
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1613
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1654
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<pre style="margin: 0;"> <span id="LC1654" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertTrue</span><span class="p">(</span><span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">img2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">coords</span><span class="p">[</span><span class="s" style="color: #d14;">'bands'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">4</span><span class="p">)</span></span>
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1614
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1655
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<pre style="margin: 0;"> <span id="LC1655" class="line" lang="python"></span>
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1656
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<pre style="margin: 0;">+<span id="LC1656" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_final_mode</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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1657
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<pre style="margin: 0;">+<span id="LC1657" class="line" lang="python"> <span class="s" style="color: #d14;">"""Test final_mode."""</span></span>
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1658
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<pre style="margin: 0;">+<span id="LC1658" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1659" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1659
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<pre style="margin: 0;">+<span id="LC1659" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">trollimage</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">xrimage</span></span>
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1660
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<pre style="margin: 0;">+<span id="LC1660" class="line" lang="python"></span>
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1661
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<pre style="margin: 0;">+<span id="LC1661" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># numpy array image</span></span>
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1662
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<pre style="margin: 0;">+<span id="LC1662" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">DataArray</span><span class="p">(</span><span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="mi" style="color: #099;">75</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">reshape</span><span class="p">(</span><span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">3</span><span class="p">),</span> <span class="n" style="color: #333;">dims</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1663" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1663
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<pre style="margin: 0;">+<span id="LC1663" class="line" lang="python"> <span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'x'</span><span class="p">,</span> <span class="s" style="color: #d14;">'bands'</span><span class="p">],</span> <span class="n" style="color: #333;">coords</span><span class="o" style="font-weight: 600;">=</span><span class="p">{</span><span class="s" style="color: #d14;">'bands'</span><span class="p">:</span> <span class="p">[</span><span class="s" style="color: #d14;">'R'</span><span class="p">,</span> <span class="s" style="color: #d14;">'G'</span><span class="p">,</span> <span class="s" style="color: #d14;">'B'</span><span class="p">]})</span></span>
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<td class="diff-line-num new new_line" data-linenumber="1664" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1664
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<pre style="margin: 0;">+<span id="LC1664" class="line" lang="python"> <span class="n" style="color: #333;">img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">XRImage</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">)</span></span>
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1665
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<pre style="margin: 0;">+<span id="LC1665" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertEqual</span><span class="p">(</span><span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">final_mode</span><span class="p">(</span><span class="bp" style="color: #999;">None</span><span class="p">),</span> <span class="s" style="color: #d14;">'RGBA'</span><span class="p">)</span></span>
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1666
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<pre style="margin: 0;">+<span id="LC1666" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertEqual</span><span class="p">(</span><span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">final_mode</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">),</span> <span class="s" style="color: #d14;">'RGB'</span><span class="p">)</span></span>
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1667
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<pre style="margin: 0;">+<span id="LC1667" class="line" lang="python"></span>
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1615
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1668
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<pre style="margin: 0;"> <span id="LC1668" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_colorize</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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1616
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1669
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<pre style="margin: 0;"> <span id="LC1669" class="line" lang="python"> <span class="s" style="color: #d14;">"""Test colorize with an RGB colormap."""</span></span>
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1617
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1670
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<pre style="margin: 0;"> <span id="LC1670" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1875" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1928" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1875,6 +1928,42 @@ class TestXRImage(unittest.TestCase):</td>
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1875
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1928
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<pre style="margin: 0;"> <span id="LC1928" class="line" lang="python"> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">show</span><span class="p">()</span></span>
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1876
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1929
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<pre style="margin: 0;"> <span id="LC1929" class="line" lang="python"> <span class="n" style="color: #333;">s</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assert_called_once</span><span class="p">()</span></span>
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1877
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1930
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<pre style="margin: 0;"> <span id="LC1930" class="line" lang="python"></span>
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1931
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<pre style="margin: 0;">+<span id="LC1931" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_apply_pil</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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1932
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<pre style="margin: 0;">+<span id="LC1932" class="line" lang="python"> <span class="s" style="color: #d14;">"""Test the apply_pil method."""</span></span>
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1933
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<pre style="margin: 0;">+<span id="LC1933" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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1934
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<pre style="margin: 0;">+<span id="LC1934" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">trollimage</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">xrimage</span></span>
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1935
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<pre style="margin: 0;">+<span id="LC1935" class="line" lang="python"></span>
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1936
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<pre style="margin: 0;">+<span id="LC1936" class="line" lang="python"> <span class="n" style="color: #333;">np_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="mi" style="color: #099;">75</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">reshape</span><span class="p">(</span><span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="mi" style="color: #099;">3</span><span class="p">)</span> <span class="o" style="font-weight: 600;">/</span> <span class="mf" style="color: #099;">75.</span></span>
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1937
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<pre style="margin: 0;">+<span id="LC1937" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">DataArray</span><span class="p">(</span><span class="n" style="color: #333;">np_data</span><span class="p">,</span> <span class="n" style="color: #333;">dims</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>
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1938
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<pre style="margin: 0;">+<span id="LC1938" class="line" lang="python"> <span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'x'</span><span class="p">,</span> <span class="s" style="color: #d14;">'bands'</span><span class="p">],</span> <span class="n" style="color: #333;">coords</span><span class="o" style="font-weight: 600;">=</span><span class="p">{</span><span class="s" style="color: #d14;">'bands'</span><span class="p">:</span> <span class="p">[</span><span class="s" style="color: #d14;">'R'</span><span class="p">,</span> <span class="s" style="color: #d14;">'G'</span><span class="p">,</span> <span class="s" style="color: #d14;">'B'</span><span class="p">]})</span></span>
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1939
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<pre style="margin: 0;">+<span id="LC1939" class="line" lang="python"></span>
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1940
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<pre style="margin: 0;">+<span id="LC1940" class="line" lang="python"> <span class="n" style="color: #333;">dummy_args</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[(</span><span class="n" style="color: #333;">OrderedDict</span><span class="p">(),</span> <span class="p">),</span> <span class="p">{}]</span></span>
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1941
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<pre style="margin: 0;">+<span id="LC1941" class="line" lang="python"></span>
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1942
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<pre style="margin: 0;">+<span id="LC1942" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">dummy_fun</span><span class="p">(</span><span class="n" style="color: #333;">pil_obj</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">):</span></span>
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1943
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<pre style="margin: 0;">+<span id="LC1943" class="line" lang="python"> <span class="n" style="color: #333;">dummy_args</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">args</span></span>
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1944
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<pre style="margin: 0;">+<span id="LC1944" class="line" lang="python"> <span class="n" style="color: #333;">dummy_args</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">kwargs</span></span>
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1945
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<pre style="margin: 0;">+<span id="LC1945" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">pil_obj</span></span>
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1946
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<pre style="margin: 0;">+<span id="LC1946" class="line" lang="python"></span>
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1947
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<pre style="margin: 0;">+<span id="LC1947" class="line" lang="python"> <span class="n" style="color: #333;">img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">XRImage</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">)</span></span>
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1948
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<pre style="margin: 0;">+<span id="LC1948" class="line" lang="python"> <span class="n" style="color: #333;">pi</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mock</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">MagicMock</span><span class="p">()</span></span>
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1949
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<pre style="margin: 0;">+<span id="LC1949" class="line" lang="python"> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">pil_image</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pi</span></span>
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1950
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<pre style="margin: 0;">+<span id="LC1950" class="line" lang="python"> <span class="n" style="color: #333;">res</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">apply_pil</span><span class="p">(</span><span class="n" style="color: #333;">dummy_fun</span><span class="p">,</span> <span class="s" style="color: #d14;">'RGB'</span><span class="p">)</span></span>
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1951
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<pre style="margin: 0;">+<span id="LC1951" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># check that the pil image generation is delayed</span></span>
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1952
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<pre style="margin: 0;">+<span id="LC1952" class="line" lang="python"> <span class="n" style="color: #333;">pi</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assert_not_called</span><span class="p">()</span></span>
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1953
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<pre style="margin: 0;">+<span id="LC1953" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># make it happen</span></span>
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1954
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<pre style="margin: 0;">+<span id="LC1954" class="line" lang="python"> <span class="n" style="color: #333;">res</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">compute</span><span class="p">()</span></span>
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1955
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<pre style="margin: 0;">+<span id="LC1955" class="line" lang="python"> <span class="n" style="color: #333;">pi</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">return_value</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">convert</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assert_called_with</span><span class="p">(</span><span class="s" style="color: #d14;">'RGB'</span><span class="p">)</span></span>
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1956
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<pre style="margin: 0;">+<span id="LC1956" class="line" lang="python"></span>
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1957
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<pre style="margin: 0;">+<span id="LC1957" class="line" lang="python"> <span class="n" style="color: #333;">img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xrimage</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">XRImage</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">)</span></span>
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1958
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<pre style="margin: 0;">+<span id="LC1958" class="line" lang="python"> <span class="n" style="color: #333;">pi</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mock</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">MagicMock</span><span class="p">()</span></span>
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1959
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<pre style="margin: 0;">+<span id="LC1959" class="line" lang="python"> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">pil_image</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pi</span></span>
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1960
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<pre style="margin: 0;">+<span id="LC1960" class="line" lang="python"> <span class="n" style="color: #333;">res</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">apply_pil</span><span class="p">(</span><span class="n" style="color: #333;">dummy_fun</span><span class="p">,</span> <span class="s" style="color: #d14;">'RGB'</span><span class="p">,</span></span>
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1961
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<pre style="margin: 0;">+<span id="LC1961" class="line" lang="python"> <span class="n" style="color: #333;">fun_args</span><span class="o" style="font-weight: 600;">=</span><span class="p">(</span><span class="s" style="color: #d14;">'Hey'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Jude'</span><span class="p">),</span></span>
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1962
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<pre style="margin: 0;">+<span id="LC1962" class="line" lang="python"> <span class="n" style="color: #333;">fun_kwargs</span><span class="o" style="font-weight: 600;">=</span><span class="p">{</span><span class="s" style="color: #d14;">'chorus'</span><span class="p">:</span> <span class="s" style="color: #d14;">"La lala lalalala"</span><span class="p">})</span></span>
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1963
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<pre style="margin: 0;">+<span id="LC1963" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertEqual</span><span class="p">(</span><span class="n" style="color: #333;">dummy_args</span><span class="p">,</span> <span class="p">[({},</span> <span class="p">),</span> <span class="p">{}])</span></span>
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1964
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<pre style="margin: 0;">+<span id="LC1964" class="line" lang="python"> <span class="n" style="color: #333;">res</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">compute</span><span class="p">()</span></span>
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1965
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<pre style="margin: 0;">+<span id="LC1965" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">assertEqual</span><span class="p">(</span><span class="n" style="color: #333;">dummy_args</span><span class="p">,</span> <span class="p">[(</span><span class="n" style="color: #333;">OrderedDict</span><span class="p">(),</span> <span class="s" style="color: #d14;">'Hey'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Jude'</span><span class="p">),</span> <span class="p">{</span><span class="s" style="color: #d14;">'chorus'</span><span class="p">:</span> <span class="s" style="color: #d14;">"La lala lalalala"</span><span class="p">}])</span></span>
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1966
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<pre style="margin: 0;">+<span id="LC1966" class="line" lang="python"></span>
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1878
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1967
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<pre style="margin: 0;"> <span id="LC1967" class="line" lang="python"></span>
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1879
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1968
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<pre style="margin: 0;"> <span id="LC1968" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">suite</span><span class="p">():</span></span>
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1880
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1969
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<pre style="margin: 0;"> <span id="LC1969" class="line" lang="python"> <span class="s" style="color: #d14;">"""Create the suite for test_image."""</span></span>
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<li id="380301af31f9d6940547a045145fcdc5b4d39ad6">
<a href="https://salsa.debian.org/debian-gis-team/trollimage/commit/54d7955b35df379cc486e39a76882e332445c14d#380301af31f9d6940547a045145fcdc5b4d39ad6"><strong>trollimage/version.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -23,9 +23,9 @@ def get_keywords():</td>
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23
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23
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># setup.py/versioneer.py will grep for the variable names, so they must</span></span>
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24
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># each be defined on a line of their own. _version.py will just call</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># get_keywords().</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">git_refnames</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">" (HEAD -> master, tag: v1.1<span class="idiff left right">0.1</span>)"</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">git_full</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"<span class="idiff left right">9130e96fae8e880ccf843298b508712a4d80a481</span>"</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="python"> <span class="n" style="color: #333;">git_date</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"2019-<span class="idiff left right">09-26 15:08:59 -05</span>00"</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">git_refnames</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">" (HEAD -> master, tag: v1.1<span class="idiff left right">1.0</span>)"</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">git_full</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"<span class="idiff left right">103b269144d33bbcf106c8afa20de95618d5a890</span>"</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python"> <span class="n" style="color: #333;">git_date</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"2019-<span class="idiff left right">10-24 20:12:03 +02</span>00"</span></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"> <span class="n" style="color: #333;">keywords</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="s" style="color: #d14;">"refnames"</span><span class="p">:</span> <span class="n" style="color: #333;">git_refnames</span><span class="p">,</span> <span class="s" style="color: #d14;">"full"</span><span class="p">:</span> <span class="n" style="color: #333;">git_full</span><span class="p">,</span> <span class="s" style="color: #d14;">"date"</span><span class="p">:</span> <span class="n" style="color: #333;">git_date</span><span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">keywords</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -34,13 +34,14 @@ chunks can be saved in parallel.</td>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">logging</span></span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">os</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">threading</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">np</span></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">PIL</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">Image</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">PILImage</span></span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xr</span></span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">xarray.ufuncs</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">xu</span></span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">dask</span></span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">dask.array</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">da</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">dask.delayed</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">delayed</span></span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">trollimage.image</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">check_image_format</span></span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="python"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -71,47 +72,24 @@ class RIOFile(object):</td>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mode</span></span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">kwargs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">kwargs</span></span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_closed</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">True</span></span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">kwargs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">pop</span><span class="p">(</span><span class="s" style="color: #d14;">'overviews'</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">lock</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">threading</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Lock</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__setitem__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">,</span> <span class="n" style="color: #333;">item</span><span class="p">):</span></span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="python"> <span class="s" style="color: #d14;">"""Put the data chunk in the image."""</span></span>
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">key</span><span class="p">)</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">3</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="python"> <span class="n" style="color: #333;">indexes</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span><span class="nb" style="color: #0086b3;">range</span><span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="python"> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="python"> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="python"> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">step</span> <span class="ow" style="font-weight: 600;">or</span> <span class="mi" style="color: #099;">1</span></span>
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="python"> <span class="p">))</span></span>
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="python"> <span class="n" style="color: #333;">y</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">2</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="python"> <span class="n" style="color: #333;">indexes</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="python"> <span class="n" style="color: #333;">y</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="python"> <span class="n" style="color: #333;">chy_off</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="python"> <span class="n" style="color: #333;">chy</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="python"> <span class="n" style="color: #333;">chx_off</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="python"> <span class="n" style="color: #333;">chx</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># band indexes</span></span>
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="n" style="color: #333;">item</span><span class="p">,</span> <span class="n" style="color: #333;">window</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">Window</span><span class="p">(</span><span class="n" style="color: #333;">chx_off</span><span class="p">,</span> <span class="n" style="color: #333;">chy_off</span><span class="p">,</span> <span class="n" style="color: #333;">chx</span><span class="p">,</span> <span class="n" style="color: #333;">chy</span><span class="p">),</span></span>
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="python"> <span class="n" style="color: #333;">indexes</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">indexes</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="python"> <span class="o" style="font-weight: 600;">@</span><span class="nb" style="color: #0086b3;">property</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">closed</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="python"> <span class="s" style="color: #d14;">"""Check if the file is closed."""</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span> <span class="ow" style="font-weight: 600;">or</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">closed</span></span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">open</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">mode</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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101
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="python"> <span class="s" style="color: #d14;">"""Open the file."""</span></span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="python"> <span class="n" style="color: #333;">mode</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mode</span> <span class="ow" style="font-weight: 600;">or</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span></span>
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;"><span class="idiff left right">_</span>closed</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">closed</span><span class="p">:</span></span>
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86
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rasterio</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span><span class="p">,</span> <span class="n" style="color: #333;">mode</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>
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105
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_closed</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">False</span></span>
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106
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87
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="python"></span>
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107
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88
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">close</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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108
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89
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="python"> <span class="s" style="color: #d14;">"""Close the file."""</span></span>
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109
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_closed</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">:</span></span>
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111
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="python"> <span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">debug</span><span class="p">(</span><span class="s" style="color: #d14;">'Building overviews </span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s'</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">))</span></span>
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">build_overviews</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_closed</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">True</span></span>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">lock</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">closed</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__enter__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="python"> <span class="s" style="color: #d14;">"""Enter method."""</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -142,6 +120,82 @@ class RIOFile(object):</td>
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142
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120
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">colorinterp</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">val</span></span>
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122
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">write</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="python"> <span class="s" style="color: #d14;">"""Write to the file."""</span></span>
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">lock</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'a'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">build_overviews</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="python"> <span class="s" style="color: #d14;">"""Write overviews."""</span></span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">lock</span><span class="p">:</span></span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'a'</span><span class="p">)</span></span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">build_overviews</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>
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134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">update_tags</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">):</span></span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="python"> <span class="s" style="color: #d14;">"""Update tags."""</span></span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">lock</span><span class="p">:</span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'a'</span><span class="p">)</span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">update_tags</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">RIOTag</span><span class="p">:</span></span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="python"> <span class="s" style="color: #d14;">"""Rasterio wrapper to allow da.store on tag."""</span></span>
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144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="python"></span>
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145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__init__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">rfile</span><span class="p">,</span> <span class="n" style="color: #333;">name</span><span class="p">):</span></span>
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146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="python"> <span class="s" style="color: #d14;">"""Init the rasterio tag."""</span></span>
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147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rfile</span></span>
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148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">name</span></span>
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149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="python"></span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__setitem__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">,</span> <span class="n" style="color: #333;">item</span><span class="p">):</span></span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="python"> <span class="s" style="color: #d14;">"""Put the data in the tag."""</span></span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="python"> <span class="n" style="color: #333;">kwargs</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">name</span><span class="p">:</span> <span class="n" style="color: #333;">item</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">item</span><span class="p">()}</span></span>
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153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">update_tags</span><span class="p">(</span><span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="python"></span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">close</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="python"> <span class="s" style="color: #d14;">"""Close the file."""</span></span>
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157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="python"></span>
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159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="python"></span>
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160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">RIODataset</span><span class="p">:</span></span>
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161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="python"> <span class="s" style="color: #d14;">"""A wrapper for a rasterio dataset."""</span></span>
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162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="python"></span>
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163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__init__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">rfile</span><span class="p">,</span> <span class="n" style="color: #333;">overviews</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="python"> <span class="s" style="color: #d14;">"""Init the rasterio dataset."""</span></span>
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165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rfile</span></span>
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166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">overviews</span></span>
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167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="python"></span>
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168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__setitem__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">,</span> <span class="n" style="color: #333;">item</span><span class="p">):</span></span>
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="python"> <span class="s" style="color: #d14;">"""Put the data chunk in the image."""</span></span>
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170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">key</span><span class="p">)</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">3</span><span class="p">:</span></span>
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171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="python"> <span class="n" style="color: #333;">indexes</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span><span class="nb" style="color: #0086b3;">range</span><span class="p">(</span></span>
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172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="python"> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span></span>
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173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="python"> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span></span>
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174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="python"> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">step</span> <span class="ow" style="font-weight: 600;">or</span> <span class="mi" style="color: #099;">1</span></span>
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175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="python"> <span class="p">))</span></span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="python"> <span class="n" style="color: #333;">y</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">2</span><span class="p">]</span></span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="python"> <span class="n" style="color: #333;">indexes</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="python"> <span class="n" style="color: #333;">y</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">key</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="python"> <span class="n" style="color: #333;">chy_off</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="python"> <span class="n" style="color: #333;">chy</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="python"> <span class="n" style="color: #333;">chx_off</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="python"> <span class="n" style="color: #333;">chx</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span></span>
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="python"></span>
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187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># band indexes</span></span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="n" style="color: #333;">item</span><span class="p">,</span> <span class="n" style="color: #333;">window</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">Window</span><span class="p">(</span><span class="n" style="color: #333;">chx_off</span><span class="p">,</span> <span class="n" style="color: #333;">chy_off</span><span class="p">,</span> <span class="n" style="color: #333;">chx</span><span class="p">,</span> <span class="n" style="color: #333;">chy</span><span class="p">),</span></span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="python"> <span class="n" style="color: #333;">indexes</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">indexes</span><span class="p">)</span></span>
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190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="python"></span>
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191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">close</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="python"> <span class="s" style="color: #d14;">"""Close the file."""</span></span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">:</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="python"> <span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">debug</span><span class="p">(</span><span class="s" style="color: #d14;">'Building overviews </span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s'</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">))</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">build_overviews</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">overviews</span><span class="p">)</span></span>
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196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="python"></span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="python"></span>
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145
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199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="python"></span>
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146
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">color_interp</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">):</span></span>
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147
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201
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="python"> <span class="s" style="color: #d14;">"""Get the color interpretation for this image."""</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -170,6 +224,45 @@ def color_interp(data):</td>
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170
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224
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<pre style="margin: 0;"> <span id="LC224" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="p">[</span><span class="n" style="color: #333;">colors</span><span class="p">[</span><span class="n" style="color: #333;">band</span><span class="p">]</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">band</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">data</span><span class="p">[</span><span class="s" style="color: #d14;">'bands'</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">values</span><span class="p">]</span></span>
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171
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225
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<pre style="margin: 0;"> <span id="LC225" class="line" lang="python"></span>
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172
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226
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="python"></span>
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227
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">combine_scales_offsets</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">):</span></span>
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228
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="python"> <span class="s" style="color: #d14;">"""Combine ``(scale, offset)`` tuples in one, considering they are applied from left to right.</span></span>
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="python"><span class="s" style="color: #d14;"> For example, if we have our base data called ```orig_data`` and apply to it</span></span>
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="python"><span class="s" style="color: #d14;"> ``(scale_1, offset_1)``, then ``(scale_2, offset_2)`` such that::</span></span>
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="python"><span class="s" style="color: #d14;"> data_1 = orig_data * scale_1 + offset_1</span></span>
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="python"><span class="s" style="color: #d14;"> data_2 = data_1 * scale_2 + offset_2</span></span>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="python"><span class="s" style="color: #d14;"> this function will return the tuple ``(scale, offset)`` such that::</span></span>
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="python"><span class="s" style="color: #d14;"> data_2 = orig_data * scale + offset</span></span>
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="python"><span class="s" style="color: #d14;"> given the arguments ``(scale_1, offset_1), (scale_2, offset_2)``.</span></span>
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="python"> <span class="n" style="color: #333;">cscale</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="python"> <span class="n" style="color: #333;">coffset</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">scale</span><span class="p">,</span> <span class="n" style="color: #333;">offset</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">args</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="python"> <span class="n" style="color: #333;">cscale</span> <span class="o" style="font-weight: 600;">*=</span> <span class="n" style="color: #333;">scale</span></span>
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="python"> <span class="n" style="color: #333;">coffset</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">coffset</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">scale</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">offset</span></span>
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">cscale</span><span class="p">,</span> <span class="n" style="color: #333;">coffset</span></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="python"></span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">invert_scale_offset</span><span class="p">(</span><span class="n" style="color: #333;">scale</span><span class="p">,</span> <span class="n" style="color: #333;">offset</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="python"> <span class="s" style="color: #d14;">"""Invert scale and offset to allow reverse transformation.</span></span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="python"><span class="s" style="color: #d14;"> Ie, it will return ``rscale, roffset`` such that::</span></span>
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="python"><span class="s" style="color: #d14;"> orig_data = rscale * data + roffset</span></span>
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="python"><span class="s" style="color: #d14;"> if::</span></span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="python"><span class="s" style="color: #d14;"> data = scale * orig_data + offset</span></span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;">1</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">scale</span><span class="p">,</span> <span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">offset</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">scale</span></span>
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<pre style="margin: 0;"> <span id="LC266" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">XRImage</span><span class="p">(</span><span class="nb" style="color: #0086b3;">object</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC267" class="line" lang="python"> <span class="s" style="color: #d14;">"""Image class using an :class:`xarray.DataArray` as internal storage.</span></span>
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<pre style="margin: 0;"> <span id="LC268" class="line" lang="python"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -287,13 +380,36 @@ class XRImage(object):</td>
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<pre style="margin: 0;"> <span id="LC380" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC381" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">rio_save</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">filename</span><span class="p">,</span> <span class="n" style="color: #333;">fformat</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>
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289
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382
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<pre style="margin: 0;"> <span id="LC382" class="line" lang="python"> <span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">uint8</span><span class="p">,</span> <span class="n" style="color: #333;">compute</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="n" style="color: #333;">tags</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>
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290
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<pre style="margin: 0;">-<span id="LC290" class="line" lang="python"> <span class="n" style="color: #333;">keep_palette</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">cmap</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>
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383
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<pre style="margin: 0;">+<span id="LC383" class="line" lang="python"> <span class="n" style="color: #333;">keep_palette</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">cmap</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">overviews</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>
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384
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<pre style="margin: 0;">+<span id="LC384" class="line" lang="python"> <span class="n" style="color: #333;">include_scale_offset_tags</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span></span>
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291
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385
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<pre style="margin: 0;"> <span id="LC385" class="line" lang="python"> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">format_kwargs</span><span class="p">):</span></span>
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292
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386
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<pre style="margin: 0;"> <span id="LC386" class="line" lang="python"> <span class="s" style="color: #d14;">"""Save the image using rasterio.</span></span>
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293
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387
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<pre style="margin: 0;"> <span id="LC387" class="line" lang="python"></span>
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294
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="python"><span class="s" style="color: #d14;"> Overviews can be added to the file using the `overviews` kwarg, eg::</span></span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="python"><span class="s" style="color: #d14;"> Args:</span></span>
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389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="python"><span class="s" style="color: #d14;"> filename (string): The filename to save to.</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="python"><span class="s" style="color: #d14;"> fformat (string): The format to save to. If not specified (default),</span></span>
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391
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<pre style="margin: 0;">+<span id="LC391" class="line" lang="python"><span class="s" style="color: #d14;"> it will be infered from the file extension.</span></span>
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392
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<pre style="margin: 0;">+<span id="LC392" class="line" lang="python"><span class="s" style="color: #d14;"> fill_value (number): The value to fill the missing data with.</span></span>
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393
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<pre style="margin: 0;">+<span id="LC393" class="line" lang="python"><span class="s" style="color: #d14;"> Default is ``None``, translating to trying to keep the data</span></span>
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394
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<pre style="margin: 0;">+<span id="LC394" class="line" lang="python"><span class="s" style="color: #d14;"> transparent.</span></span>
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395
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<pre style="margin: 0;">+<span id="LC395" class="line" lang="python"><span class="s" style="color: #d14;"> dtype (np.dtype): The type to save the data to. Defaults to</span></span>
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396
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<pre style="margin: 0;">+<span id="LC396" class="line" lang="python"><span class="s" style="color: #d14;"> np.uint8.</span></span>
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397
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<pre style="margin: 0;">+<span id="LC397" class="line" lang="python"><span class="s" style="color: #d14;"> compute (bool): Whether (default) or not to compute the lazy data.</span></span>
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398
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<pre style="margin: 0;">+<span id="LC398" class="line" lang="python"><span class="s" style="color: #d14;"> tags (dict): Tags to include in the file.</span></span>
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399
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<pre style="margin: 0;">+<span id="LC399" class="line" lang="python"><span class="s" style="color: #d14;"> keep_palette (bool): Whether or not (default) to keep the image in</span></span>
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400
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<pre style="margin: 0;">+<span id="LC400" class="line" lang="python"><span class="s" style="color: #d14;"> P mode.</span></span>
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401
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<pre style="margin: 0;">+<span id="LC401" class="line" lang="python"><span class="s" style="color: #d14;"> cmap (colormap): The colormap to use for the data.</span></span>
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402
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<pre style="margin: 0;">+<span id="LC402" class="line" lang="python"><span class="s" style="color: #d14;"> overviews (list): The reduction factors of the overviews to include</span></span>
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403
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<pre style="margin: 0;">+<span id="LC403" class="line" lang="python"><span class="s" style="color: #d14;"> in the image, eg::</span></span>
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404
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<pre style="margin: 0;">+<span id="LC404" class="line" lang="python"></span>
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405
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<pre style="margin: 0;">+<span id="LC405" class="line" lang="python"><span class="s" style="color: #d14;"> img.rio_save('myfile.tif', overviews=[2, 4, 8, 16])</span></span>
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406
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<pre style="margin: 0;">+<span id="LC406" class="line" lang="python"></span>
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407
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<pre style="margin: 0;">+<span id="LC407" class="line" lang="python"><span class="s" style="color: #d14;"> include_scale_offset_tags (bool): Whether or not (default) to</span></span>
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408
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<pre style="margin: 0;">+<span id="LC408" class="line" lang="python"><span class="s" style="color: #d14;"> include a ``scale`` and an ``offset`` tag in the data that would</span></span>
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<pre style="margin: 0;">+<span id="LC409" class="line" lang="python"><span class="s" style="color: #d14;"> help retrieving original data values from pixel values.</span></span>
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410
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<pre style="margin: 0;"> <span id="LC410" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="python"><span class="s" style="color: #d14;"> img.rio_save('myfile.tif', overviews=[2, 4, 8, 16])</span></span>
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411
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<pre style="margin: 0;">+<span id="LC411" class="line" lang="python"><span class="s" style="color: #d14;"> Returns:</span></span>
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412
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<pre style="margin: 0;">+<span id="LC412" class="line" lang="python"><span class="s" style="color: #d14;"> The delayed or computed result of the saving.</span></span>
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413
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<pre style="margin: 0;"> <span id="LC413" class="line" lang="python"></span>
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414
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<pre style="margin: 0;"> <span id="LC414" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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415
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<pre style="margin: 0;"> <span id="LC415" class="line" lang="python"> <span class="n" style="color: #333;">fformat</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fformat</span> <span class="ow" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">os</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">splitext</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">)[</span><span class="mi" style="color: #099;">1</span><span class="p">][</span><span class="mi" style="color: #099;">1</span><span class="p">:]</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -309,7 +425,6 @@ class XRImage(object):</td>
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309
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425
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<pre style="margin: 0;"> <span id="LC425" class="line" lang="python"> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">mode</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">finalize</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">dtype</span><span class="p">,</span></span>
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310
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426
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<pre style="margin: 0;"> <span id="LC426" class="line" lang="python"> <span class="n" style="color: #333;">keep_palette</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">keep_palette</span><span class="p">,</span> <span class="n" style="color: #333;">cmap</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">cmap</span><span class="p">)</span></span>
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311
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427
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<pre style="margin: 0;"> <span id="LC427" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">transpose</span><span class="p">(</span><span class="s" style="color: #d14;">'bands'</span><span class="p">,</span> <span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'x'</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC312" class="line" lang="python"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span></span>
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313
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<pre style="margin: 0;"> <span id="LC428" class="line" lang="python"></span>
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429
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<pre style="margin: 0;"> <span id="LC429" class="line" lang="python"> <span class="n" style="color: #333;">crs</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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315
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430
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<pre style="margin: 0;"> <span id="LC430" class="line" lang="python"> <span class="n" style="color: #333;">gcps</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="361" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="476" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -361,6 +476,10 @@ class XRImage(object):</td>
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361
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476
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<pre style="margin: 0;"> <span id="LC476" class="line" lang="python"> <span class="k" style="font-weight: 600;">elif</span> <span class="n" style="color: #333;">driver</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">'JPEG'</span> <span class="ow" style="font-weight: 600;">and</span> <span class="s" style="color: #d14;">'A'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">mode</span><span class="p">:</span></span>
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362
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477
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<pre style="margin: 0;"> <span id="LC477" class="line" lang="python"> <span class="k" style="font-weight: 600;">raise</span> <span class="nb" style="color: #0086b3;">ValueError</span><span class="p">(</span><span class="s" style="color: #d14;">'JPEG does not support alpha'</span><span class="p">)</span></span>
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363
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478
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<pre style="margin: 0;"> <span id="LC478" class="line" lang="python"></span>
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479
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<pre style="margin: 0;">+<span id="LC479" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">include_scale_offset_tags</span><span class="p">:</span></span>
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480
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<pre style="margin: 0;">+<span id="LC480" class="line" lang="python"> <span class="n" style="color: #333;">scale</span><span class="p">,</span> <span class="n" style="color: #333;">offset</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">get_scaling_from_history</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="s" style="color: #d14;">'enhancement_history'</span><span class="p">,</span> <span class="p">[]))</span></span>
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481
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<pre style="margin: 0;">+<span id="LC481" class="line" lang="python"> <span class="n" style="color: #333;">tags</span><span class="p">[</span><span class="s" style="color: #d14;">'scale'</span><span class="p">],</span> <span class="n" style="color: #333;">tags</span><span class="p">[</span><span class="s" style="color: #d14;">'offset'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">invert_scale_offset</span><span class="p">(</span><span class="n" style="color: #333;">scale</span><span class="p">,</span> <span class="n" style="color: #333;">offset</span><span class="p">)</span></span>
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482
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<pre style="margin: 0;">+<span id="LC482" class="line" lang="python"></span>
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364
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483
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<pre style="margin: 0;"> <span id="LC483" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># FIXME add metadata</span></span>
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365
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484
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<pre style="margin: 0;"> <span id="LC484" class="line" lang="python"> <span class="n" style="color: #333;">r_file</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">RIOFile</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">,</span> <span class="s" style="color: #d14;">'w'</span><span class="p">,</span> <span class="n" style="color: #333;">driver</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">driver</span><span class="p">,</span></span>
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366
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485
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<pre style="margin: 0;"> <span id="LC485" class="line" lang="python"> <span class="n" style="color: #333;">width</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">sizes</span><span class="p">[</span><span class="s" style="color: #d14;">'x'</span><span class="p">],</span> <span class="n" style="color: #333;">height</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">sizes</span><span class="p">[</span><span class="s" style="color: #d14;">'y'</span><span class="p">],</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="493" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -374,7 +493,6 @@ class XRImage(object):</td>
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374
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493
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<pre style="margin: 0;"> <span id="LC493" class="line" lang="python"> <span class="n" style="color: #333;">r_file</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">open</span><span class="p">()</span></span>
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375
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494
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<pre style="margin: 0;"> <span id="LC494" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">keep_palette</span><span class="p">:</span></span>
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376
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495
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<pre style="margin: 0;"> <span id="LC495" class="line" lang="python"> <span class="n" style="color: #333;">r_file</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">colorinterp</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">color_interp</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">)</span></span>
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377
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<pre style="margin: 0;">-<span id="LC377" class="line" lang="python"> <span class="n" style="color: #333;">r_file</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">update_tags</span><span class="p">(</span><span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">tags</span><span class="p">)</span></span>
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378
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496
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<pre style="margin: 0;"> <span id="LC496" class="line" lang="python"></span>
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379
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497
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<pre style="margin: 0;"> <span id="LC497" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">keep_palette</span> <span class="ow" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">cmap</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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380
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498
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<pre style="margin: 0;"> <span id="LC498" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span> <span class="o" style="font-weight: 600;">!=</span> <span class="s" style="color: #d14;">'uint8'</span><span class="p">:</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="504" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -386,15 +504,35 @@ class XRImage(object):</td>
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386
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504
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<pre style="margin: 0;"> <span id="LC504" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">AttributeError</span><span class="p">:</span></span>
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387
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505
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<pre style="margin: 0;"> <span id="LC505" class="line" lang="python"> <span class="k" style="font-weight: 600;">raise</span> <span class="nb" style="color: #0086b3;">ValueError</span><span class="p">(</span><span class="s" style="color: #d14;">"Colormap is not formatted correctly"</span><span class="p">)</span></span>
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388
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506
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<pre style="margin: 0;"> <span id="LC506" class="line" lang="python"></span>
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507
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<pre style="margin: 0;">+<span id="LC507" class="line" lang="python"> <span class="n" style="color: #333;">da_tags</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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508
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<pre style="margin: 0;">+<span id="LC508" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">key</span><span class="p">,</span> <span class="n" style="color: #333;">val</span> <span class="ow" style="font-weight: 600;">in</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span><span class="n" style="color: #333;">tags</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">items</span><span class="p">()):</span></span>
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509
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<pre style="margin: 0;">+<span id="LC509" class="line" lang="python"> <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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510
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<pre style="margin: 0;">+<span id="LC510" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="nb" style="color: #0086b3;">isinstance</span><span class="p">(</span><span class="n" style="color: #333;">val</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Array</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC511" class="line" lang="python"> <span class="n" style="color: #333;">da_tags</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">append</span><span class="p">((</span><span class="n" style="color: #333;">val</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">RIOTag</span><span class="p">(</span><span class="n" style="color: #333;">r_file</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">)))</span></span>
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512
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<pre style="margin: 0;">+<span id="LC512" class="line" lang="python"> <span class="n" style="color: #333;">tags</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">pop</span><span class="p">(</span><span class="n" style="color: #333;">key</span><span class="p">)</span></span>
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513
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<pre style="margin: 0;">+<span id="LC513" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">AttributeError</span><span class="p">:</span></span>
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514
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<pre style="margin: 0;">+<span id="LC514" class="line" lang="python"> <span class="k" style="font-weight: 600;">continue</span></span>
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515
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<pre style="margin: 0;">+<span id="LC515" class="line" lang="python"></span>
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516
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<pre style="margin: 0;">+<span id="LC516" class="line" lang="python"> <span class="n" style="color: #333;">r_file</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rfile</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">update_tags</span><span class="p">(</span><span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">tags</span><span class="p">)</span></span>
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517
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<pre style="margin: 0;">+<span id="LC517" class="line" lang="python"> <span class="n" style="color: #333;">r_dataset</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">RIODataset</span><span class="p">(</span><span class="n" style="color: #333;">r_file</span><span class="p">,</span> <span class="n" style="color: #333;">overviews</span><span class="p">)</span></span>
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518
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<pre style="margin: 0;">+<span id="LC518" class="line" lang="python"></span>
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519
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<pre style="margin: 0;">+<span id="LC519" class="line" lang="python"> <span class="n" style="color: #333;">to_store</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">(</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">r_dataset</span><span class="p">)</span></span>
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520
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<pre style="margin: 0;">+<span id="LC520" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">da_tags</span><span class="p">:</span></span>
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521
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<pre style="margin: 0;">+<span id="LC521" class="line" lang="python"> <span class="n" style="color: #333;">to_store</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span><span class="nb" style="color: #0086b3;">zip</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="p">([</span><span class="n" style="color: #333;">to_store</span><span class="p">]</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">da_tags</span><span class="p">)))</span></span>
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522
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<pre style="margin: 0;">+<span id="LC522" class="line" lang="python"></span>
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389
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523
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<pre style="margin: 0;"> <span id="LC523" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">compute</span><span class="p">:</span></span>
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390
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524
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<pre style="margin: 0;"> <span id="LC524" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># write data to the file now</span></span>
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391
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<pre style="margin: 0;">-<span id="LC391" class="line" lang="python"> <span class="n" style="color: #333;">res</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">store</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">r_file</span><span class="p">)</span></span>
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392
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<pre style="margin: 0;">-<span id="LC392" class="line" lang="python"> <span class="n" style="color: #333;">r_file</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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525
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<pre style="margin: 0;">+<span id="LC525" class="line" lang="python"> <span class="n" style="color: #333;">res</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">store</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">to_store</span><span class="p">)</span></span>
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526
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<pre style="margin: 0;">+<span id="LC526" class="line" lang="python"> <span class="n" style="color: #333;">to_close</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">to_store</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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527
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<pre style="margin: 0;">+<span id="LC527" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">isinstance</span><span class="p">(</span><span class="n" style="color: #333;">to_close</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">tuple</span><span class="p">):</span></span>
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528
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<pre style="margin: 0;">+<span id="LC528" class="line" lang="python"> <span class="n" style="color: #333;">to_close</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">to_close</span><span class="p">]</span></span>
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529
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<pre style="margin: 0;">+<span id="LC529" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">item</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">to_close</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC530" class="line" lang="python"> <span class="n" style="color: #333;">item</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC531" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">res</span></span>
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<pre style="margin: 0;"> <span id="LC532" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># provide the data object and the opened file so the caller can</span></span>
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<pre style="margin: 0;"> <span id="LC533" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># store them when they would like. Caller is responsible for</span></span>
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<pre style="margin: 0;"> <span id="LC534" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># closing the file</span></span>
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<pre style="margin: 0;">-<span id="LC397" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;"><span class="idiff left">data</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">data</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">r_fil</span>e</span></span>
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<pre style="margin: 0;">+<span id="LC535" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;"><span class="idiff left right">to_stor</span>e</span></span>
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<pre style="margin: 0;"> <span id="LC536" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC537" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">pil_save</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">filename</span><span class="p">,</span> <span class="n" style="color: #333;">fformat</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC538" class="line" lang="python"> <span class="n" style="color: #333;">compute</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">format_kwargs</span><span class="p">):</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -417,6 +555,62 @@ class XRImage(object):</td>
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<pre style="margin: 0;"> <span id="LC555" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">delay</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">compute</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC556" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">delay</span></span>
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<pre style="margin: 0;"> <span id="LC557" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC558" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">get_scaling_from_history</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">history</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC559" class="line" lang="python"> <span class="s" style="color: #d14;">"""Merge the scales and offsets from the history.</span></span>
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<pre style="margin: 0;">+<span id="LC560" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC561" class="line" lang="python"><span class="s" style="color: #d14;"> If ``history`` isn't provided, the history of the current image will be</span></span>
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<pre style="margin: 0;">+<span id="LC562" class="line" lang="python"><span class="s" style="color: #d14;"> used.</span></span>
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<pre style="margin: 0;">+<span id="LC563" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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<pre style="margin: 0;">+<span id="LC564" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">history</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC565" class="line" lang="python"> <span class="n" style="color: #333;">history</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="s" style="color: #d14;">'enhancement_history'</span><span class="p">,</span> <span class="p">[])</span></span>
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<pre style="margin: 0;">+<span id="LC566" class="line" lang="python"> <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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567
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<pre style="margin: 0;">+<span id="LC567" class="line" lang="python"> <span class="n" style="color: #333;">scaling</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[(</span><span class="n" style="color: #333;">item</span><span class="p">[</span><span class="s" style="color: #d14;">'scale'</span><span class="p">],</span> <span class="n" style="color: #333;">item</span><span class="p">[</span><span class="s" style="color: #d14;">'offset'</span><span class="p">])</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">item</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">history</span><span class="p">]</span></span>
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568
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<pre style="margin: 0;">+<span id="LC568" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">KeyError</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">err</span><span class="p">:</span></span>
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569
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<pre style="margin: 0;">+<span id="LC569" class="line" lang="python"> <span class="k" style="font-weight: 600;">raise</span> <span class="nb" style="color: #0086b3;">NotImplementedError</span><span class="p">(</span><span class="s" style="color: #d14;">'Can only get combine scaling from a list of scaling operations: </span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s'</span> <span class="o" style="font-weight: 600;">%</span> <span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="n" style="color: #333;">err</span><span class="p">))</span></span>
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570
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<pre style="margin: 0;">+<span id="LC570" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">combine_scales_offsets</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">scaling</span><span class="p">)</span></span>
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571
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<pre style="margin: 0;">+<span id="LC571" class="line" lang="python"></span>
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572
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<pre style="margin: 0;">+<span id="LC572" class="line" lang="python"> <span class="o" style="font-weight: 600;">@</span><span class="n" style="color: #333;">delayed</span><span class="p">(</span><span class="n" style="color: #333;">nout</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">pure</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">)</span></span>
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573
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<pre style="margin: 0;">+<span id="LC573" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">_delayed_apply_pil</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">fun</span><span class="p">,</span> <span class="n" style="color: #333;">pil_args</span><span class="p">,</span> <span class="n" style="color: #333;">pil_kwargs</span><span class="p">,</span> <span class="n" style="color: #333;">fun_args</span><span class="p">,</span> <span class="n" style="color: #333;">fun_kwargs</span><span class="p">,</span></span>
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574
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<pre style="margin: 0;">+<span id="LC574" class="line" lang="python"> <span class="n" style="color: #333;">image_metadata</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">output_mode</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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575
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<pre style="margin: 0;">+<span id="LC575" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">pil_args</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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576
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<pre style="margin: 0;">+<span id="LC576" class="line" lang="python"> <span class="n" style="color: #333;">pil_args</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">tuple</span><span class="p">()</span></span>
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577
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<pre style="margin: 0;">+<span id="LC577" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">pil_kwargs</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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578
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<pre style="margin: 0;">+<span id="LC578" class="line" lang="python"> <span class="n" style="color: #333;">pil_kwargs</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">dict</span><span class="p">()</span></span>
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579
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<pre style="margin: 0;">+<span id="LC579" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">fun_args</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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580
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<pre style="margin: 0;">+<span id="LC580" class="line" lang="python"> <span class="n" style="color: #333;">fun_args</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">tuple</span><span class="p">()</span></span>
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581
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<pre style="margin: 0;">+<span id="LC581" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">fun_kwargs</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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582
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<pre style="margin: 0;">+<span id="LC582" class="line" lang="python"> <span class="n" style="color: #333;">fun_kwargs</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">dict</span><span class="p">()</span></span>
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583
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<pre style="margin: 0;">+<span id="LC583" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">image_metadata</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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584
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<pre style="margin: 0;">+<span id="LC584" class="line" lang="python"> <span class="n" style="color: #333;">image_metadata</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">dict</span><span class="p">()</span></span>
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585
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<pre style="margin: 0;">+<span id="LC585" class="line" lang="python"> <span class="n" style="color: #333;">new_img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fun</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">pil_image</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">pil_args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">pil_kwargs</span><span class="p">),</span> <span class="n" style="color: #333;">image_metadata</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">fun_args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">fun_kwargs</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC586" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">output_mode</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC587" class="line" lang="python"> <span class="n" style="color: #333;">new_img</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">new_img</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">convert</span><span class="p">(</span><span class="n" style="color: #333;">output_mode</span><span class="p">)</span></span>
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588
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<pre style="margin: 0;">+<span id="LC588" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">array</span><span class="p">(</span><span class="n" style="color: #333;">new_img</span><span class="p">)</span> <span class="o" style="font-weight: 600;">/</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">type</span><span class="p">(</span><span class="mf" style="color: #099;">255.0</span><span class="p">)</span></span>
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589
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<pre style="margin: 0;">+<span id="LC589" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC590" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">apply_pil</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">fun</span><span class="p">,</span> <span class="n" style="color: #333;">output_mode</span><span class="p">,</span> <span class="n" style="color: #333;">pil_args</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">pil_kwargs</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">fun_args</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">fun_kwargs</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC591" class="line" lang="python"> <span class="s" style="color: #d14;">"""Apply a function `fun` on the pillow image corresponding to the instance of the XRImage.</span></span>
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<pre style="margin: 0;">+<span id="LC592" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC593" class="line" lang="python"><span class="s" style="color: #d14;"> The function shall take a pil image as first argument, and is then passed fun_args and fun_kwargs.</span></span>
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<pre style="margin: 0;">+<span id="LC594" class="line" lang="python"><span class="s" style="color: #d14;"> In addition, the current images's metadata is passed as a keyword argument called `image_mda`.</span></span>
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<pre style="margin: 0;">+<span id="LC595" class="line" lang="python"><span class="s" style="color: #d14;"> It is expected to return the modified pil image.</span></span>
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<pre style="margin: 0;">+<span id="LC596" class="line" lang="python"><span class="s" style="color: #d14;"> This function returns a new XRImage instance with the modified image data.</span></span>
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<pre style="margin: 0;">+<span id="LC597" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC598" class="line" lang="python"><span class="s" style="color: #d14;"> The pil_args and pil_kwargs are passed to the `pil_image` method of the XRImage instance.</span></span>
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<pre style="margin: 0;">+<span id="LC599" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC600" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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601
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<pre style="margin: 0;">+<span id="LC601" class="line" lang="python"> <span class="n" style="color: #333;">new_array</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_delayed_apply_pil</span><span class="p">(</span><span class="n" style="color: #333;">fun</span><span class="p">,</span> <span class="n" style="color: #333;">pil_args</span><span class="p">,</span> <span class="n" style="color: #333;">pil_kwargs</span><span class="p">,</span> <span class="n" style="color: #333;">fun_args</span><span class="p">,</span> <span class="n" style="color: #333;">fun_kwargs</span><span class="p">,</span></span>
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602
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<pre style="margin: 0;">+<span id="LC602" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="p">,</span> <span class="n" style="color: #333;">output_mode</span><span class="p">)</span></span>
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603
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<pre style="margin: 0;">+<span id="LC603" class="line" lang="python"> <span class="n" style="color: #333;">bands</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">output_mode</span><span class="p">)</span></span>
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604
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<pre style="margin: 0;">+<span id="LC604" class="line" lang="python"> <span class="n" style="color: #333;">arr</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">da</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">from_delayed</span><span class="p">(</span><span class="n" style="color: #333;">new_array</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span><span class="p">,</span></span>
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605
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<pre style="margin: 0;">+<span id="LC605" class="line" lang="python"> <span class="n" style="color: #333;">shape</span><span class="o" style="font-weight: 600;">=</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">sizes</span><span class="p">[</span><span class="s" style="color: #d14;">'y'</span><span class="p">],</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">sizes</span><span class="p">[</span><span class="s" style="color: #d14;">'x'</span><span class="p">],</span> <span class="n" style="color: #333;">bands</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC606" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC607" class="line" lang="python"> <span class="n" style="color: #333;">new_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">DataArray</span><span class="p">(</span><span class="n" style="color: #333;">arr</span><span class="p">,</span> <span class="n" style="color: #333;">dims</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'x'</span><span class="p">,</span> <span class="s" style="color: #d14;">'bands'</span><span class="p">],</span></span>
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608
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<pre style="margin: 0;">+<span id="LC608" class="line" lang="python"> <span class="n" style="color: #333;">coords</span><span class="o" style="font-weight: 600;">=</span><span class="p">{</span><span class="s" style="color: #d14;">'y'</span><span class="p">:</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">coords</span><span class="p">[</span><span class="s" style="color: #d14;">'y'</span><span class="p">],</span></span>
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<pre style="margin: 0;">+<span id="LC609" class="line" lang="python"> <span class="s" style="color: #d14;">'x'</span><span class="p">:</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">coords</span><span class="p">[</span><span class="s" style="color: #d14;">'x'</span><span class="p">],</span></span>
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610
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<pre style="margin: 0;">+<span id="LC610" class="line" lang="python"> <span class="s" style="color: #d14;">'bands'</span><span class="p">:</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span><span class="n" style="color: #333;">output_mode</span><span class="p">)},</span></span>
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611
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<pre style="margin: 0;">+<span id="LC611" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC612" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">XRImage</span><span class="p">(</span><span class="n" style="color: #333;">new_data</span><span class="p">)</span></span>
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613
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<pre style="margin: 0;">+<span id="LC613" class="line" lang="python"></span>
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614
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<pre style="margin: 0;"> <span id="LC614" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">_pngmeta</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC615" class="line" lang="python"> <span class="s" style="color: #d14;">"""Return GeoImage.tags as a PNG metadata object.</span></span>
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<pre style="margin: 0;"> <span id="LC616" class="line" lang="python"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -485,7 +679,9 @@ class XRImage(object):</td>
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679
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<pre style="margin: 0;"> <span id="LC679" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">issubdtype</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span><span class="p">,</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">integer</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC680" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># xarray sometimes upcasts this calculation, so cast again</span></span>
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681
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<pre style="margin: 0;"> <span id="LC681" class="line" lang="python"> <span class="n" style="color: #333;">null_mask</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_scale_to_dtype</span><span class="p">(</span><span class="n" style="color: #333;">null_mask</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC682" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">copy</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC683" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">concat</span><span class="p">([</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">null_mask</span><span class="p">],</span> <span class="n" style="color: #333;">dim</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"bands"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC684" class="line" lang="python"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">attrs</span></span>
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<pre style="margin: 0;"> <span id="LC685" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">data</span></span>
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<pre style="margin: 0;"> <span id="LC686" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC687" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">_scale_to_dtype</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">):</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -497,6 +693,7 @@ class XRImage(object):</td>
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693
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<pre style="margin: 0;"> <span id="LC693" class="line" lang="python"><span class="s" style="color: #d14;"> be in the 0-1 range already.</span></span>
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694
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<pre style="margin: 0;"> <span id="LC694" class="line" lang="python"></span>
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695
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<pre style="margin: 0;"> <span id="LC695" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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<pre style="margin: 0;">+<span id="LC696" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">copy</span><span class="p">()</span></span>
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697
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<pre style="margin: 0;"> <span id="LC697" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">issubdtype</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">,</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">integer</span><span class="p">):</span></span>
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698
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<pre style="margin: 0;"> <span id="LC698" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">issubdtype</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">integer</span><span class="p">):</span></span>
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699
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<pre style="margin: 0;"> <span id="LC699" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># preserve integer data type</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -504,8 +701,12 @@ class XRImage(object):</td>
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701
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<pre style="margin: 0;"> <span id="LC701" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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702
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<pre style="margin: 0;"> <span id="LC702" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># scale float data (assumed to be 0 to 1) to full integer space</span></span>
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703
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<pre style="margin: 0;"> <span id="LC703" class="line" lang="python"> <span class="n" style="color: #333;">dinfo</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">iinfo</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC507" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">clip</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span> <span class="o" style="font-weight: 600;">*</span> <span class="p">(</span><span class="n" style="color: #333;">dinfo</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">max</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">dinfo</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">min</span><span class="p">)</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">dinfo</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">min</span></span>
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<pre style="margin: 0;">+<span id="LC704" class="line" lang="python"> <span class="n" style="color: #333;">scale</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dinfo</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">max</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">dinfo</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">min</span></span>
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<pre style="margin: 0;">+<span id="LC705" class="line" lang="python"> <span class="n" style="color: #333;">offset</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dinfo</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">min</span></span>
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<pre style="margin: 0;">+<span id="LC706" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">clip</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">scale</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">offset</span></span>
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707
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<pre style="margin: 0;">+<span id="LC707" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">setdefault</span><span class="p">(</span><span class="s" style="color: #d14;">'enhancement_history'</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">())</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">append</span><span class="p">({</span><span class="s" style="color: #d14;">'scale'</span><span class="p">:</span> <span class="n" style="color: #333;">scale</span><span class="p">,</span> <span class="s" style="color: #d14;">'offset'</span><span class="p">:</span> <span class="n" style="color: #333;">offset</span><span class="p">})</span></span>
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708
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<pre style="margin: 0;"> <span id="LC708" class="line" lang="python"> <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">round</span><span class="p">()</span></span>
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709
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<pre style="margin: 0;">+<span id="LC709" class="line" lang="python"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">attrs</span></span>
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710
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<pre style="margin: 0;"> <span id="LC710" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">data</span></span>
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<pre style="margin: 0;"> <span id="LC711" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC712" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">_check_modes</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">modes</span><span class="p">):</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -616,6 +817,13 @@ class XRImage(object):</td>
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<pre style="margin: 0;"> <span id="LC817" class="line" lang="python"> <span class="nb" style="color: #0086b3;">DeprecationWarning</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC818" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">finalize</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">,</span> <span class="n" style="color: #333;">keep_palette</span><span class="p">,</span> <span class="n" style="color: #333;">cmap</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC819" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC820" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">final_mode</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC821" class="line" lang="python"> <span class="s" style="color: #d14;">"""Get the mode of the finalized image when provided this fill_value."""</span></span>
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<pre style="margin: 0;">+<span id="LC822" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span> <span class="ow" style="font-weight: 600;">and</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">endswith</span><span class="p">(</span><span class="s" style="color: #d14;">'A'</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC823" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">'A'</span></span>
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<pre style="margin: 0;">+<span id="LC824" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC825" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span></span>
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<pre style="margin: 0;">+<span id="LC826" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC827" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">finalize</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">uint8</span><span class="p">,</span> <span class="n" style="color: #333;">keep_palette</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">cmap</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC828" class="line" lang="python"> <span class="s" style="color: #d14;">"""Finalize the image to be written to an output file.</span></span>
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<pre style="margin: 0;"> <span id="LC829" class="line" lang="python"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -645,31 +853,42 @@ class XRImage(object):</td>
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<pre style="margin: 0;"> <span id="LC853" class="line" lang="python"> <span class="s" style="color: #d14;">"setting fill_value to 0"</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC854" class="line" lang="python"> <span class="n" style="color: #333;">fill_value</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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<pre style="margin: 0;"> <span id="LC855" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC648" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span></span>
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<pre style="margin: 0;">+<span id="LC856" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">copy</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC857" class="line" lang="python"> <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC858" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="p">[</span><span class="s" style="color: #d14;">'enhancement_history'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="p">[</span><span class="s" style="color: #d14;">'enhancement_history'</span><span class="p">])</span></span>
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<pre style="margin: 0;">+<span id="LC859" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">KeyError</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC860" class="line" lang="python"> <span class="k" style="font-weight: 600;">pass</span></span>
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<pre style="margin: 0;">+<span id="LC861" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span></span>
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<pre style="margin: 0;"> <span id="LC862" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># if the data are integers then this fill value will be used to check for invalid values</span></span>
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<pre style="margin: 0;">-<span id="LC650" class="line" lang="python"> <span class="n" style="color: #333;">ifill</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="s" style="color: #d14;">'_FillValue'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">issubdtype</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">integer</span><span class="p">)</span> <span class="k" style="font-weight: 600;">else</span> <span class="bp" style="color: #999;">None</span></span>
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<pre style="margin: 0;">-<span id="LC651" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">keep_palette</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC652" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span> <span class="ow" style="font-weight: 600;">and</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">endswith</span><span class="p">(</span><span class="s" style="color: #d14;">'A'</span><span class="p">):</span></span>
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<pre style="margin: 0;">-<span id="LC653" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># We don't have a fill value or an alpha, let's add an alpha</span></span>
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<pre style="margin: 0;">-<span id="LC654" class="line" lang="python"> <span class="n" style="color: #333;">alpha</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_create_alpha</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">ifill</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC655" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_scale_to_dtype</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC656" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_add_alpha</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">alpha</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">alpha</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC657" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC658" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># scale float data to the proper dtype</span></span>
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<pre style="margin: 0;">-<span id="LC659" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># this method doesn't cast yet so that we can keep track of NULL values</span></span>
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<pre style="margin: 0;">-<span id="LC660" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_scale_to_dtype</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC661" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Add fill_value after all other calculations have been done to</span></span>
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<pre style="margin: 0;">-<span id="LC662" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># make sure it is not scaled for the data type</span></span>
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<pre style="margin: 0;">-<span id="LC663" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">ifill</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span> <span class="ow" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC664" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># cast fill value to output type so we don't change data type</span></span>
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<pre style="margin: 0;">-<span id="LC665" class="line" lang="python"> <span class="n" style="color: #333;">fill_value</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC666" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># integer fields have special fill values</span></span>
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<pre style="margin: 0;">-<span id="LC667" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">where</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">ifill</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">))</span></span>
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<pre style="margin: 0;">-<span id="LC668" class="line" lang="python"> <span class="k" style="font-weight: 600;">elif</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC669" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">fillna</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">))</span></span>
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<pre style="margin: 0;">-<span id="LC670" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC671" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC672" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span></span>
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<pre style="margin: 0;">+<span id="LC863" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">xr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">set_options</span><span class="p">(</span><span class="n" style="color: #333;">keep_attrs</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC864" class="line" lang="python"> <span class="n" style="color: #333;">ifill</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="s" style="color: #d14;">'_FillValue'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">issubdtype</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">np</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">integer</span><span class="p">)</span> <span class="k" style="font-weight: 600;">else</span> <span class="bp" style="color: #999;">None</span></span>
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865
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<pre style="margin: 0;">+<span id="LC865" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">keep_palette</span><span class="p">:</span></span>
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866
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<pre style="margin: 0;">+<span id="LC866" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span> <span class="ow" style="font-weight: 600;">and</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">mode</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">endswith</span><span class="p">(</span><span class="s" style="color: #d14;">'A'</span><span class="p">):</span></span>
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867
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<pre style="margin: 0;">+<span id="LC867" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># We don't have a fill value or an alpha, let's add an alpha</span></span>
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<pre style="margin: 0;">+<span id="LC868" class="line" lang="python"> <span class="n" style="color: #333;">alpha</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_create_alpha</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">ifill</span><span class="p">)</span></span>
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869
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<pre style="margin: 0;">+<span id="LC869" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_scale_to_dtype</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC870" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span></span>
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<pre style="margin: 0;">+<span id="LC871" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC872" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_add_alpha</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">alpha</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">alpha</span><span class="p">)</span></span>
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873
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<pre style="margin: 0;">+<span id="LC873" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">attrs</span></span>
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874
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<pre style="margin: 0;">+<span id="LC874" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC875" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># scale float data to the proper dtype</span></span>
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<pre style="margin: 0;">+<span id="LC876" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># this method doesn't cast yet so that we can keep track of NULL values</span></span>
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877
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<pre style="margin: 0;">+<span id="LC877" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_scale_to_dtype</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC878" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span></span>
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<pre style="margin: 0;">+<span id="LC879" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Add fill_value after all other calculations have been done to</span></span>
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<pre style="margin: 0;">+<span id="LC880" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># make sure it is not scaled for the data type</span></span>
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881
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<pre style="margin: 0;">+<span id="LC881" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">ifill</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span> <span class="ow" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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882
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<pre style="margin: 0;">+<span id="LC882" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># cast fill value to output type so we don't change data type</span></span>
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<pre style="margin: 0;">+<span id="LC883" class="line" lang="python"> <span class="n" style="color: #333;">fill_value</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC884" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># integer fields have special fill values</span></span>
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<pre style="margin: 0;">+<span id="LC885" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">where</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">ifill</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC886" class="line" lang="python"> <span class="k" style="font-weight: 600;">elif</span> <span class="n" style="color: #333;">fill_value</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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887
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<pre style="margin: 0;">+<span id="LC887" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">fillna</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="n" style="color: #333;">fill_value</span><span class="p">))</span></span>
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888
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<pre style="margin: 0;">+<span id="LC888" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC889" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="n" style="color: #333;">dtype</span><span class="p">)</span></span>
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890
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<pre style="margin: 0;">+<span id="LC890" class="line" lang="python"> <span class="n" style="color: #333;">final_data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">attrs</span></span>
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<pre style="margin: 0;">+<span id="LC891" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC892" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">final_data</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">join</span><span class="p">(</span><span class="n" style="color: #333;">final_data</span><span class="p">[</span><span class="s" style="color: #d14;">'bands'</span><span class="p">]</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">values</span><span class="p">)</span></span>
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893
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<pre style="margin: 0;"> <span id="LC893" class="line" lang="python"></span>
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894
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<pre style="margin: 0;"> <span id="LC894" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">pil_image</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">fill_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">compute</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">):</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="929" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -929,7 +1148,7 @@ class XRImage(object):</td>
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929
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1148
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<pre style="margin: 0;"> <span id="LC1148" class="line" lang="python"></span>
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930
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1149
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<pre style="margin: 0;"> <span id="LC1149" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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931
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1150
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<pre style="margin: 0;"> <span id="LC1150" class="line" lang="python"> <span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span></span>
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<td class="diff-line-num old old_line" data-linenumber="932" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
932
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<pre style="margin: 0;">-<span id="LC932" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">k</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;"><span class="idiff left right">xu</span></span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">s0</span><span class="p">)</span></span>
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1151
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<pre style="margin: 0;">+<span id="LC1151" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">k</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;"><span class="idiff left right">np</span></span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">s0</span><span class="p">)</span></span>
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933
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1152
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<pre style="margin: 0;"> <span id="LC1152" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">attrs</span></span>
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<td class="diff-line-num old_line" data-linenumber="934" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
934
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1153
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<pre style="margin: 0;"> <span id="LC1153" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">attrs</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">setdefault</span><span class="p">(</span><span class="s" style="color: #d14;">'enhancement_history'</span><span class="p">,</span> <span class="p">[])</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">append</span><span class="p">({</span><span class="s" style="color: #d14;">'weber_fechner'</span><span class="p">:</span> <span class="p">(</span><span class="n" style="color: #333;">k</span><span class="p">,</span> <span class="n" style="color: #333;">s0</span><span class="p">)})</span></span>
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935
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1154
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<pre style="margin: 0;"> <span id="LC1154" class="line" lang="python"></span>
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