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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/java-team/cdk">Debian Java Maintainers / cdk</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/java-team/cdk/commit/9e60b1290aad8cf07509663fbf3905ecf665547c">9e60b129</a></strong>
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<span>by Egon Willighagen</span>
<i>at 2019-11-20T21:06:30Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Made the EDAM annotation more suitable</pre>
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<strong><a href="https://salsa.debian.org/java-team/cdk/commit/188e1fa5c6f8b4a69fdf5e02978dc4374ac3344f">188e1fa5</a></strong>
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<span>by Andreas Tille</span>
<i>at 2019-11-21T09:00:52Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge branch 'patch-2' into 'master'
Made the EDAM annotation more suitable
See merge request java-team/cdk!3</pre>
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<h4>1 changed file:</h4>
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<a href="#555ad7fb0fa2873caacc85eb30c512baefae2cb4">
debian/upstream/edam_
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<h4>Changes:</h4>
<li id="555ad7fb0fa2873caacc85eb30c512baefae2cb4">
<a href="https://salsa.debian.org/java-team/cdk/compare/b5860d79dfebff51a5691d1ac5d7094ee629f66d...188e1fa5c6f8b4a69fdf5e02978dc4374ac3344f#555ad7fb0fa2873caacc85eb30c512baefae2cb4"><strong>debian/upstream/edam_</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">---</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">ontology: EDAM (1.16)</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">topic:</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> - <span class="idiff left right">Sequence analysi</span>s</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> - <span class="idiff left right">Cheminformatic</span>s</span>
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5
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">scopes:</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> - name: summary</span>
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7
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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> function:</span>
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8
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<td class="diff-line-num new_line old" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> - Multiple sequence alignment</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> - Visualisation</span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> - Isotopic distributions calculation</span>
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10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> - Comparison</span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> - Conversion</span>
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9
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<td class="diff-line-num new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> input:</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> - data: <span class="idiff left right">Sequence</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> - data: <span class="idiff left right">Data</span></span>
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<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> formats:</span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> - EMBL format</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> - FASTA</span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> - GCG</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> - GenBank format</span>
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<td class="diff-line-num old old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> - nbrf/pir</span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> - PHYLIP format</span>
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<td class="diff-line-num old old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> - UniProtKB format</span>
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19
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> - data: Gene tree</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> - Molfile</span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> - SMILES</span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> - SDF</span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> - XYZ</span>
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20
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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
19
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> output:</span>
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21
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<td class="diff-line-num new_line old" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> - data: <span class="idiff left right">Alignment</span></span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> - data: <span class="idiff left right">Data</span></span>
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22
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21
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> formats:</span>
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23
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> - <span class="idiff left right">FASTA-aln</span></span>
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24
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<td class="diff-line-num new_line old" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> - <span class="idiff left right">PHYLIP format</span></span>
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<td class="diff-line-num old old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
25
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<td class="diff-line-num new_line old" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> - <span class="idiff left right">selex</span></span>
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<td class="diff-line-num old old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
26
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<td class="diff-line-num new_line old" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> - <span class="idiff left right">Stockholm format</span></span>
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<td class="diff-line-num old old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> - <span class="idiff left right">Vienna local RNA secondary structure format</span></span>
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<td class="diff-line-num old old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
28
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> <span class="idiff left right">- data: Phylogenetic tree</span></span>
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29
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> <span class="idiff left right"> formats: [Phylip tree format]</span></span></pre>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> - <span class="idiff left right">SDF</span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> - <span class="idiff left right">Molfile</span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> - <span class="idiff left right">SDF</span></span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> - <span class="idiff left right">XYZ</span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> - <span class="idiff left right">InChI</span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> <span class="idiff left right"> - InChIKey</span></span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> <span class="idiff left right">- data: QSAR descriptor</span></span></pre>
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