[From nobody Fri Jun 12 12:07:09 2026 Received: (at submit) by bugs.debian.org; 9 Jun 2026 10:29:26 +0000 X-Spam-Checker-Version: SpamAssassin 4.0.1-bugs.debian.org_2005_01_02 (2024-03-25) on buxtehude.debian.org X-Spam-Level: X-Spam-Status: No, score=-119.2 required=4.0 tests=BAYES_00, BODY_INCLUDES_PACKAGE,DKIMWL_WL_HIGH,DKIM_SIGNED,DKIM_VALID, DKIM_VALID_AU,DKIM_VALID_EF,FOURLA,FROMDEVELOPER,HAS_PACKAGE, MURPHY_DRUGS_REL6,RCVD_IN_DNSWL_MED,SPF_HELO_PASS,SPF_PASS, USER_IN_DKIM_WELCOMELIST,WORD_WITHOUT_VOWELS,X_DEBBUGS_CC autolearn=ham autolearn_force=no version=4.0.1-bugs.debian.org_2005_01_02 X-Spam-Bayes: score:0.0000 Tokens: new, 209; hammy, 150; neutral, 226; spammy, 0. spammytokens: hammytokens:0.000-+--pkgbuilddir, 0.000-+--PKGBUILDDIR, 0.000-+--HTo:N*Debian, 0.000-+--forky, 0.000-+--H*F:U*sanvila Return-path: <sanvila@debian.org> Received: from mitropoulos.debian.org ([2001:648:2ffc:deb:216:61ff:fe9d:958d]:57440) by buxtehude.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wWti2-00Bj4I-1M for submit@bugs.debian.org; Tue, 09 Jun 2026 10:29:26 +0000 Received: via submission from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA, CN=paradis.debian.org, EMAIL=hostmaster@paradis.debian.org (verified) by mitropoulos.debian.org with esmtps (TLS1.3:ECDHE_SECP256R1__RSA_PSS_RSAE_SHA256__AES_256_GCM:256) (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wWti0-00BQ2n-1z for submit@bugs.debian.org; Tue, 09 Jun 2026 10:29:24 +0000 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=debian.org; s=smtpauto.paradis; h=Date:Message-Id:Subject:To:From:Reply-To:Cc: MIME-Version:Content-Type:Content-Transfer-Encoding:Content-ID: Content-Description:In-Reply-To:References; bh=1zv5w7klK6wnzx2zUaK/j3zsceiWsNeihKtYCkYynME=; b=f+mH023nSQEIGuQWkIoFWo6IIr jW0M/4nIcrPm8bnK3u+oIze9KNIGSFmBExHqJVWBHFgBNEotfpESpLZ+4Fqh8U0NQ3hZPbZZCh6VW js0t2WFQI84EGrOFKH0kw0pSOpgyTxS3dsFtvHIx3gXqcRZuFsHy8Jo+LFK8pIUiIr/d3i07Nzhg4 ulBtS0TGKn6gTifvypgFErxczRYPUFOQbEe+YJSbicv3eTaUAm+HbINS9VOrF4J3z5sRqa5IvkJqj vnlMZMHJC2I+7pBPzlJxnv8TXRhxzkj5J/SjPMAkVFpB7s92sIUx2iHviY30Me7k2tR65MkhZjw18 DY8Mo7Bw==; Received: from sanvila by paradis.debian.org with local (Exim 4.96) (envelope-from <sanvila@debian.org>) id 1wWthz-00Aqzf-09 for submit@bugs.debian.org; Tue, 09 Jun 2026 10:29:23 +0000 From: Santiago Vila <sanvila@debian.org> To: Debian BTS <submit@bugs.debian.org> Subject: cmlxom: FTBFS: CMLBuilderTest.testBuildFile:156 OldNodeFactory validation expected:<...DOCTYPE root "null".[ at line 27, column 50]> but was:<...DOCTYPE root "null".[]> X-Debbugs-Cc: sanvila@debian.org Message-Id: <E1wWthz-00Aqzf-09@paradis.debian.org> Date: Tue, 09 Jun 2026 10:29:23 +0000 Delivered-To: submit@bugs.debian.org Package: src:cmlxom Version: 4.18-1 Severity: serious Tags: ftbfs forky sid Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202606/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:cmlxom, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] [INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLJoinTest [INFO] Running org.xmlcml.cml.element.main.CMLBuilderTest [ERROR] Tests run: 3, Failures: 1, Errors: 0, Skipped: 0, Time elapsed: 0.007 s <<< FAILURE! - in org.xmlcml.cml.element.main.CMLBuilderTest [ERROR] testBuildFile(org.xmlcml.cml.element.main.CMLBuilderTest) Time elapsed: 0.007 s <<< FAILURE! junit.framework.ComparisonFailure: OldNodeFactory validation expected:<...DOCTYPE root "null".[ at line 27, column 50]> but was:<...DOCTYPE root "null".[]> at org.xmlcml.cml.element.main.CMLBuilderTest.testBuildFile(CMLBuilderTest.java:156) [INFO] Running org.xmlcml.cml.element.main.CMLAtomTypeTest [INFO] Tests run: 45, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLAtomTypeTest [INFO] Running org.xmlcml.cml.element.main.CMLBandListTest [INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLBandListTest [INFO] Running org.xmlcml.cml.element.main.CMLMetadataTest [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLMetadataTest [INFO] Running org.xmlcml.cml.element.main.CMLDefinitionTest [INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLDefinitionTest [INFO] Running org.xmlcml.cml.element.main.CMLBasisSetTest [INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLBasisSetTest [INFO] Running org.xmlcml.cml.element.main.CMLAngleTest [INFO] Tests run: 15, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.016 s - in org.xmlcml.cml.element.main.CMLAngleTest [INFO] Running org.xmlcml.cml.element.main.CMLTorsionTest [INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.main.CMLTorsionTest [INFO] Running org.xmlcml.cml.element.main.CMLSymmetryTest [INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.064 s - in org.xmlcml.cml.element.main.CMLSymmetryTest [INFO] Running org.xmlcml.cml.element.main.CMLAbundanceTest [INFO] Tests run: 34, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in org.xmlcml.cml.element.main.CMLAbundanceTest [INFO] Running org.xmlcml.cml.element.main.ElementsTest Index 2 out of bounds for length 2 [INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in org.xmlcml.cml.element.main.ElementsTest [INFO] Running org.xmlcml.cml.element.main.CMLArrayListTest [INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 s - in org.xmlcml.cml.element.main.CMLArrayListTest [INFO] Running org.xmlcml.cml.element.main.CMLTableTest [INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.011 s - in org.xmlcml.cml.element.main.CMLTableTest [INFO] Running org.xmlcml.cml.element.main.CMLCrystalTest [INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.02 s - in org.xmlcml.cml.element.main.CMLCrystalTest [INFO] Running org.xmlcml.cml.element.lite.CMLArrayTest [INFO] Tests run: 51, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.039 s - in org.xmlcml.cml.element.lite.CMLArrayTest [INFO] Running org.xmlcml.cml.element.lite.CMLPeakListTest [INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.lite.CMLPeakListTest [INFO] Running org.xmlcml.cml.element.lite.CMLAtomTest [INFO] Tests run: 39, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.015 s - in org.xmlcml.cml.element.lite.CMLAtomTest [INFO] Running org.xmlcml.cml.element.lite.CMLMoleculeTest [INFO] Tests run: 64, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.032 s - in org.xmlcml.cml.element.lite.CMLMoleculeTest [INFO] Running org.xmlcml.cml.element.lite.CMLBondArrayTest [INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in org.xmlcml.cml.element.lite.CMLBondArrayTest [INFO] Running org.xmlcml.cml.element.lite.CMLPeakStructureTest [INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.lite.CMLPeakStructureTest [INFO] Running org.xmlcml.cml.element.lite.CMLPeakTest [INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.lite.CMLPeakTest [INFO] Running org.xmlcml.cml.element.lite.CMLBondStereoTest [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.lite.CMLBondStereoTest [INFO] Running org.xmlcml.cml.element.lite.CMLPropertyTest [INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in org.xmlcml.cml.element.lite.CMLPropertyTest [INFO] Running org.xmlcml.cml.element.lite.CMLBondTest [INFO] Tests run: 34, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.021 s - in org.xmlcml.cml.element.lite.CMLBondTest [INFO] Running org.xmlcml.cml.element.lite.CMLFormulaTest [INFO] Tests run: 53, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.088 s - in org.xmlcml.cml.element.lite.CMLFormulaTest [INFO] Running org.xmlcml.cml.element.lite.CMLScalarTest [WARNING] Tests run: 31, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.023 s - in org.xmlcml.cml.element.lite.CMLScalarTest [INFO] Running org.xmlcml.cml.element.lite.CMLAtomParityTest [INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.xmlcml.cml.element.lite.CMLAtomParityTest [INFO] Running org.xmlcml.cml.element.lite.CMLAtomArrayTest [INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.015 s - in org.xmlcml.cml.element.lite.CMLAtomArrayTest [INFO] Running org.xmlcml.molutil.test.ChemicalElementTest [INFO] Tests run: 33, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in org.xmlcml.molutil.test.ChemicalElementTest [INFO] [INFO] Results: [INFO] [ERROR] Failures: [ERROR] CMLBuilderTest.testBuildFile:156 OldNodeFactory validation expected:<...DOCTYPE root "null".[ at line 27, column 50]> but was:<...DOCTYPE root "null".[]> [INFO] [ERROR] Tests run: 1235, Failures: 1, Errors: 0, Skipped: 2 [INFO] [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 33.393 s [INFO] Finished at: 2026-06-08T22:06:53Z [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.22.3:test (default-test) on project cmlxom: There are test failures. [ERROR] [ERROR] Please refer to /<<PKGBUILDDIR>>/target/surefire-reports for the individual test results. [ERROR] Please refer to dump files (if any exist) [date].dump, [date]-jvmRun[N].dump and [date].dumpstream. [ERROR] -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException dh_auto_test: error: /usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/<<PKGBUILDDIR>> -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/<<PKGBUILDDIR>>/debian -Dmaven.repo.local=/<<PKGBUILDDIR>>/debian/maven-repo --batch-mode test returned exit code 1 make: *** [debian/rules:4: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 -------------------------------------------------------------------------------- ]