[Blends-commit] r1791 - projects/med/trunk/debian-med/tasks

[Debian Pure Blends Subversion Commit]

Author: tille
Date: Tue Aug 18 14:55:03 2009
New Revision: 1791
URL: http://svn.debian.org/viewsvn/blends?rev=1791&view=rev

Log:
Updated info about r-other-mott-happy from WNPP / VCS


Modified:
   projects/med/trunk/debian-med/tasks/bio

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=1791&view=diff&r1=1791&r2=1790&p1=projects/med/trunk/debian-med/tasks/bio&p2=projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Tue Aug 18 14:55:03 2009
@@ -2193,13 +2193,32 @@
  http://envgen.nox.ac.uk/biolinux.html
 
 Recommends: r-other-mott-happy
-Homepage: http://www.well.ox.ac.uk/happy/
+Homepage: http://www.well.ox.ac.uk/happy/happyR.shtml
 License: GPL
-Responsible: BioLinux - Stewart Houten <shou at ceh.ac.uk>
-Pkg-URL: http://nebc.nox.ac.uk/bio-linux/dists/unstable/bio-linux/binary-i386/
-Pkg-Description: Multipoint QTL Mapping in Genetically Heterogeneous Animals
-Remark: The BioLinux distribution http://envgen.nox.ac.uk/biolinux.html
-Comment: Might be available as r-other-mott-happy soon
+WNPP: 530007
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-other-mott-happy/trunk/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/R/r-other-mott-happy/trunk/
+Responsible: Steffen Moeller <moeller at debian.org>
+Pkg-Description: GNU R package for fine-mapping complex diseases
+ The idea behind this package is that when multiple strains of
+ animals that differ in their susceptibility to multiple diseases
+ are bread over multiple generations, then one can analyse the
+ contribution that a particular genetic locus has to each of those
+ diseases. While in the past this approach has been performed
+ for one disease at a time, this tool extends the statistics
+ for allowing multiple crosses and thus save animal lifes. A larger
+ stock of animals with more generations to keep them will further
+ help producing larger numbers of observable cross-over events
+ and thus help increasing the resolution of the mapping.
+ .
+ happy is an R interface into the HAPPY C package for fine-mapping
+ Quantitative Trait Loci (QTL) in Heterogenous Stocks (HS). An HS is
+ an advanced intercross between (usually eight) founder inbred strains
+ of mice. HS are suitable for fine-mapping QTL. The happy package is
+ an extension of the original C program happy; it uses the C code to
+ compute the probability of descent from each of the founders, at each
+ locus position, but the happy packager allows a much richer range of
+ models to be fit to the data.
 
 Recommends: jalview
 Homepage: http://www.jalview.org/