[Blends-commit] r1847 - projects/med/trunk/debian-med/tasks

[Debian Pure Blends Subversion Commit]

Author: tille
Date: Mon Aug 24 08:40:40 2009
New Revision: 1847
URL: http://svn.debian.org/viewsvn/blends?rev=1847&view=rev

Log:
take over some more information from wiki

Modified:
   projects/med/trunk/debian-med/tasks/bio
   projects/med/trunk/debian-med/tasks/bio-dev

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=1847&view=diff&r1=1847&r2=1846&p1=projects/med/trunk/debian-med/tasks/bio&p2=projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Mon Aug 24 08:40:40 2009
@@ -101,6 +101,7 @@
 Published-Title: Fast and effective prediction of microRNA/target duplexes RNA
 Published-In: 10:1507-1517
 Published-Year: 2004
+X-Category: Target duplex prediction
 
 X-End-Category: Analysis of RNA sequences.
 
@@ -836,6 +837,8 @@
 Responsible: Charles Plessy <plessy at debian.org>
 WNPP: 426489
 License: GPL
+X-Category: Graphical representation of sequence conservation
+Language: Tcl/Tk
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/phylographer/trunk/
 Pkg-Description: Graph Visualization Tool
  PhyloGrapher is a program designed to visualize and study evolutionary
@@ -1604,6 +1607,8 @@
 Depends: trnascan-se
 Homepage: http://lowelab.ucsc.edu/tRNAscan-SE/
 License: GPL
+Pkg-URL: http://bioweb.ucr.edu/debian-local/pool/main/t/trnascan-se/
+X-Category: tRNA discovery
 Pkg-Description: program for improved detection of transfer RNA genes in genomic sequence
  tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence
  while giving less than one false positive per 15 gigabases. Two

Modified: projects/med/trunk/debian-med/tasks/bio-dev
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio-dev?rev=1847&view=diff&r1=1847&r2=1846&p1=projects/med/trunk/debian-med/tasks/bio-dev&p2=projects/med/trunk/debian-med/tasks/bio-dev
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-dev	(original)
+++ projects/med/trunk/debian-med/tasks/bio-dev	Mon Aug 24 08:40:40 2009
@@ -3,7 +3,11 @@
  This metapackage will install Debian packages which might be helpful
  for development of applications for micro-biological research.
 
-Depends: bioperl, bioperl-run, libncbi6-dev, mcl
+Depends: bioperl, bioperl-run, libncbi6-dev
+
+Depends: mcl
+X-Category: Analysis of network structure
+X-Importance: Clustering of graphs
 
 Comment: biomode is removed from Debian because it is orphaned upstream, outdated
          and doese not work with recent Emacs any more