[Blends-commit] r1906 - projects/med/trunk/debian-med/tasks

[Debian Pure Blends Subversion Commit]

Author: tille
Date: Tue Oct  6 13:11:38 2009
New Revision: 1906
URL: http://svn.debian.org/viewsvn/blends?rev=1906&view=rev

Log:
libsrf-dev is just in Debian -> remofed srf entry from bio and added libsrf-dev to bio-dev


Modified:
   projects/med/trunk/debian-med/tasks/bio
   projects/med/trunk/debian-med/tasks/bio-dev

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=1906&view=diff&r1=1906&r2=1905&p1=projects/med/trunk/debian-med/tasks/bio&p2=projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Tue Oct  6 13:11:38 2009
@@ -1761,27 +1761,6 @@
 Remark: This package is included into BioLinux distribution
  http://envgen.nox.ac.uk/biolinux.html
 
-Depends: srf
-Homepage: http://srf.sourceforge.net/
-License: Apache License V2.0
-WNPP: 489983
-Responsible: Charles Plessy <plessy at debian.org>
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/srf/trunk/
-Pkg-Description: C++ implementation of the SRF format for DNA sequence data
- SRF (sort for Sequence Read Format) is a generic format capable of storing
- data generated by any DNA sequencing technology. Hence it has sufficient
- flexibility to store data from current and future DNA sequencing technologies
- at minimal cost of implementation. Benefits include a single input file format
- for all downstream applications and a read lookup index enabling downstream
- formats to reference reads without duplication of all of the read specific
- information.
- .
- This package contains the version 1.3 and the draft of the version
- 1.3.1 of the SRF specification.
- .
- This splits up into a library package which reads the format and a
- doc package which documents to format.
-
 Depends: alien-hunter
 Homepage: http://www.sanger.ac.uk/Software/analysis/alien_hunter/
 License: GPL

Modified: projects/med/trunk/debian-med/tasks/bio-dev
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio-dev?rev=1906&view=diff&r1=1906&r2=1905&p1=projects/med/trunk/debian-med/tasks/bio-dev&p2=projects/med/trunk/debian-med/tasks/bio-dev
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-dev	(original)
+++ projects/med/trunk/debian-med/tasks/bio-dev	Tue Oct  6 13:11:38 2009
@@ -57,6 +57,8 @@
 
 Depends: libstaden-read-dev
 
+Depends: libsrf-dev
+
 Suggests: r-cran-rocr
 Why: Even if this package is not directly connected to biology it is maintained by
      Debian Med team and should be in our focus and it is not wrong to suggest this