[Blends-commit] r2161 - projects/med/trunk/debian-med/tasks

[Debian Pure Blends Subversion Commit]

Author: tille
Date: Wed Apr 28 20:11:30 2010
New Revision: 2161
URL: http://svn.debian.org/viewsvn/blends?rev=2161&view=rev

Log:
Added gmap


Modified:
   projects/med/trunk/debian-med/tasks/bio

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/viewsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=2161&view=diff&r1=2161&r2=2160&p1=projects/med/trunk/debian-med/tasks/bio&p2=projects/med/trunk/debian-med/tasks/bio
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio	(original)
+++ projects/med/trunk/debian-med/tasks/bio	Wed Apr 28 20:11:30 2010
@@ -3219,6 +3219,19 @@
  of new molecular-biology-related services by NCBI.  It allows you to
  read and write NCBI ASN.1 files, builds Cn3D, etc.
 
+Depends: gmap
+Homepage: http://research-pub.gene.com/gmap/
+License: free
+Responsible: Shaun Jackman <sjackman at gmail.com>
+Pkg-Description: A Genomic Mapping and Alignment Program for mRNA and EST Sequences
+ GMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences, and
+ GSNAP: Genomic Short-read Nucleotide Alignment Program
+Published-Title: GMAP: a genomic mapping and alignment program for mRNA and EST sequences  
+Published-Authors: Thomas D. Wu, Colin K. Watanabe 
+Published-In: Bioinformatics
+Published-Year: 2005
+Published-URL: http://bioinformatics.oupjournals.org/cgi/content/full/21/9/1859
+
 
 Comment: Several related R packages are listed at CRAN:
          http://cran.r-project.org/web/views/Genetics.html