[Blends-commit] r2468 - in /projects/science/trunk/debian-science/tasks: neuroscience-electrophysiology neuroscience-modeling

Sat Nov 20 14:11:10 UTC 2010

Author: yoh
Date: Sat Nov 20 14:11:09 2010
New Revision: 2468

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=2468
Log:
blends-inject'ed python-brian, PyNN, libgdf-dev

Modified:
    projects/science/trunk/debian-science/tasks/neuroscience-electrophysiology
    projects/science/trunk/debian-science/tasks/neuroscience-modeling

Modified: projects/science/trunk/debian-science/tasks/neuroscience-electrophysiology
URL: http://svn.debian.org/wsvn/blends/projects/science/trunk/debian-science/tasks/neuroscience-electrophysiology?rev=2468&op=diff
==============================================================================

--- projects/science/trunk/debian-science/tasks/neuroscience-electrophysiology (original)
+++ projects/science/trunk/debian-science/tasks/neuroscience-electrophysiology Sat Nov 20 14:11:09 2010
@@ -56,3 +56,19 @@
 
 
 Suggests: science-neuroscience-modeling
+
+ ; Added by blends-inject 0.0.2. [Please note here if modified manually]
+Depends: libgdf-dev
+Homepage: http://sourceforge.net/projects/libgdf
+Language: C++, Octave/Matlab
+WNPP: 601707
+Responsible: NeuroDebian Team <team at neuro.debian.net>
+License: LGPL-3
+Vcs-Browser: http://git.debian.org/?p=pkg-exppsy/libgdf.git
+Vcs-Git: git://git.debian.org/git/pkg-exppsy/libgdf.git
+Pkg-URL: http://neuro.debian.net/pkgs/libgdf-dev.html
+Pkg-Description: IO library for the GDF -- development library
+ GDF (General Dataformat for Biosignals) is intended to provide a generic
+ storage for biosignals, such as EEG, ECG, MEG etc.
+ .
+ This package provides the header files and static library.

Modified: projects/science/trunk/debian-science/tasks/neuroscience-modeling
URL: http://svn.debian.org/wsvn/blends/projects/science/trunk/debian-science/tasks/neuroscience-modeling?rev=2468&op=diff
==============================================================================
--- projects/science/trunk/debian-science/tasks/neuroscience-modeling (original)
+++ projects/science/trunk/debian-science/tasks/neuroscience-modeling Sat Nov 20 14:11:09 2010
@@ -12,3 +12,50 @@
  useful for neuroscience research.
 
 
+
+ ; Added by blends-inject 0.0.2. [Please note here if modified manually]
+Depends: python-brian
+Homepage: http://www.briansimulator.org/
+Language: Python, C
+WNPP: 602246
+Responsible: NeuroDebian Team <team at neuro.debian.net>
+License: CeCILL-2
+Vcs-Browser: http://git.debian.org/?p=pkg-exppsy/brian.git
+Vcs-Git: git://git.debian.org/git/pkg-exppsy/brian.git
+Pkg-URL: http://neuro.debian.net/pkgs/python-brian.html
+Pkg-Description: simulator for spiking neural networks
+ Brian is a clock-driven simulator for spiking neural networks. It is
+ designed with an emphasis on flexibility and extensibility, for rapid
+ development and refinement of neural models. Neuron models are
+ specified by sets of user-specified differential equations, threshold
+ conditions and reset conditions (given as strings). The focus is
+ primarily on networks of single compartment neuron models (e.g. leaky
+ integrate-and-fire or Hodgkin-Huxley type neurons). Features include:
+  - a system for specifying quantities with physical dimensions
+  - exact numerical integration for linear differential equations
+  - Euler, Runge-Kutta and exponential Euler integration for nonlinear
+    differential equations
+  - synaptic connections with delays
+  - short-term and long-term plasticity (spike-timing dependent plasticity)
+  - a library of standard model components, including integrate-and-fire
+    equations, synapses and ionic currents
+  - a toolbox for automatically fitting spiking neuron models to
+    electrophysiological recordings
+Published-Authors: Goodman D.F. and Brette R.
+Published-DOI: 10.3389/neuro.11.005.2008
+Published-In: Front. Neuroinform
+Published-Title: Brian: a simulator for spiking neural networks in Python
+Published-Year: 2008
+
+ ; Added by blends-inject 0.0.2. [Please note here if modified manually]
+Ignore: PyNN
+Homepage: http://neuralensemble.org/trac/PyNN
+Language: Python
+Responsible: NeuroDebian Team <team at neuro.debian.net>
+Vcs-Browser: http://git.debian.org/?p=pkg-exppsy/pynn.git
+Vcs-Git: git://git.debian.org/git/pkg-exppsy/pynn.git
+Pkg-Description: simulator-independent specification of neuronal network models
+ PyNN allows to code for a model once and run it without modification
+ on any simulator that PyNN supports (currently NEURON, NEST, PCSIM
+ and Brian).  PyNN translates standard cell-model names and parameter
+ names into simulator-specific names.


