[Blends-commit] r2778 - /projects/med/trunk/debian-med/tasks/bio

[tille at users.alioth.debian.org]

Author: tille
Date: Mon Apr 25 20:13:46 2011
New Revision: 2778

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=2778
Log:
The Depends field needs a valid Debian package name as value (no spaces with extra explanation, no capital letters); the Pkg-Description is a mandatory field

Modified:
    projects/med/trunk/debian-med/tasks/bio

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=2778&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Mon Apr 25 20:13:46 2011
@@ -3716,18 +3716,20 @@
 Comment: SEQanswers: The next generation sequencing community
 	 http://seqanswers.com/forums/showthread.php?t=43
 
-Depends: SNAP (Semi-HMM-based Nucleic Acid Parser)
+Depends: snap
 Homepage: http://homepage.mac.com/iankorf/
 License: GPL2
+Pkg-Description: Semi-HMM-based Nucleic Acid Parser
  SNAP is a general purpose gene finding program suitable for both eukaryotic
  and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid
  Parser.
  Reference
  Korf I. Gene finding in novel Genomes. BMC Bioinformatics 2004, 5:59
 
-Depends: RepeatMasker
+Depends: repeatmasker
 Homepage: http://www.repeatmasker.org/
 License: Open Software License v. 2.1
+Pkg-Description: screens DNA sequences for interspersed repeats
  RepeatMasker is a program that screens DNA sequences for interspersed 
  repeats and low complexity DNA sequences. The output of the program is a detailed 
  annotation of the repeats that are present in the query sequence as well as a 
@@ -3737,10 +3739,10 @@
  RepeatMasker are performed by one of several popular search engines including, 
  cross_match, ABBlast/WUBlast, RMBlast and Decypher.
 
-Depends: TRF (Tandem Repeats Finder)
+Depends: trf
 Homepage: http://tandem.bu.edu/trf/trf.html
 License: binary only (non-free)
- Copyright (C) Dr. Gary Benson 1999-2004. All rights reserved.
+Pkg-Description: Tandem Repeats Finder
  A tandem repeat in DNA is two or more adjacent, approximate copies of a 
  pattern of nucleotides. Tandem Repeats Finder is a program to locate and 
  display tandem repeats in DNA sequences. In order to use the program, the