[Blends-commit] r2791 - /projects/med/trunk/debian-med/tasks/bio

[tille at users.alioth.debian.org]

Author: tille
Date: Fri Apr 29 06:35:17 2011
New Revision: 2791

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=2791
Log:
gbrowse now official package

Modified:
    projects/med/trunk/debian-med/tasks/bio

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=2791&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Fri Apr 29 06:35:17 2011
@@ -266,6 +266,13 @@
 Published-Year: 2000
 
 X-End-Category: Tools for the molecular biologist.
+
+X-Begin-Category: Genome Browser
+
+Depends: gbrowse
+X-Importance: Academic ones are really expensive for commercial use
+
+X-End-Category: Genome Browser
 
 Depends: biomaj
 
@@ -992,32 +999,6 @@
  indels, and nucleotide substutition.
  .
  Mauve is developed at the University of Wisconsin.
-
-Depends: gbrowse
-Homepage: http://www.gmod.org/wiki/index.php/GBrowse
-Responsible: Charles Plessy <plessy at debian.org>
-WNPP: 429610
-License: Perl Artistic License, plus additional clauses
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/gbrowse/trunk/
-X-Category: Genome Browser
-X-Importance: Academic ones are really expensive for commercial use
-Pkg-Description: The Generic Genome Browser from GMOD
- The Generic Genome Browser is a combination of database and interactive Web
- page for manipulating and displaying annotations on genomes. Some of its
- features:
-  * Simultaneous bird's eye and detailed views of the genome.
-  * Scroll, zoom, center.
-  * Attach arbitrary URLs to any annotation.
-  * Order and appearance of tracks are customizable by administrator and end-user.
-  * Search by annotation ID, name, or comment.
-  * Supports third party annotation using GFF formats.
-  * Settings persist across sessions.
-  * DNA and GFF dumps.
-  * Connectivity to different databases, including BioSQL and Chado.
-  * Multi-language support.
-  * Third-party feature loading.
-  * Customizable plug-in architecture (e.g. run BLAST, dump & import many formats,
-    find oligonucleotides, design primers, create restriction maps, edit features)
 
 Depends: phylographer
 Homepage: http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html