[Blends-commit] r2637 - in /projects/med/trunk/debian-med/tasks: bio bio-ngs

[tille at users.alioth.debian.org]

Author: tille
Date: Sat Jan 29 20:42:26 2011
New Revision: 2637

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=2637
Log:
Moved mothur to ngs

Modified:
    projects/med/trunk/debian-med/tasks/bio
    projects/med/trunk/debian-med/tasks/bio-ngs

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=2637&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Sat Jan 29 20:42:26 2011
@@ -3234,21 +3234,6 @@
  PyroNoise. According to several test data sets, the approximation gives
  very similar results in a fraction of the time.
 
-Depends: mothur
-Homepage: http://www.mothur.org
-License: free
-WNPP: 589675
-Responsible: Sri Girish Srinivasa Murthy <srigirish at evolbio.mpg.de>
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/mothur/?rev=0&sc=0
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/mothur/trunk/
-Pkg-Description: sequence analysis for research on microbiota
- Mothur seeks to develop a single piece of open-source, expandable
- software to fill the bioinformatics needs of the microbial ecology
- community. It has incorporated the functionality of dotur, sons,
- treeclimber, s-libshuff, unifrac, and much more. In addition to improving
- the flexibility of these algorithms, a number of other features including
- calculators and visualization tools were added.
-
 Depends: hilbertvisgui
 Homepage: http://www.bioconductor.org/help/bioc-views/2.7/bioc/html/HilbertVisGUI.html
 License: GPL-3

Modified: projects/med/trunk/debian-med/tasks/bio-ngs
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio-ngs?rev=2637&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-ngs (original)
+++ projects/med/trunk/debian-med/tasks/bio-ngs Sat Jan 29 20:42:26 2011
@@ -83,3 +83,19 @@
  FASTQ, Illumina Bustard & Gerald, or SRF file formats and producing
  results in the BLAT axt, the BAM/SAM, the UCSC Genome Browser bed, or
  the Illumina ELAND formats.
+
+Depends: mothur
+Homepage: http://www.mothur.org
+License: free
+WNPP: 589675
+Responsible: Sri Girish Srinivasa Murthy <srigirish at evolbio.mpg.de>
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/mothur/?rev=0&sc=0
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/mothur/trunk/
+Pkg-Description: sequence analysis for research on microbiota
+ Mothur seeks to develop a single piece of open-source, expandable
+ software to fill the bioinformatics needs of the microbial ecology
+ community. It has incorporated the functionality of dotur, sons,
+ treeclimber, s-libshuff, unifrac, and much more. In addition to improving
+ the flexibility of these algorithms, a number of other features including
+ calculators and visualization tools were added.
+