[Blends-commit] r2895 - /projects/med/trunk/debian-med/tasks/bio-dev

[tille at users.alioth.debian.org]

Author: tille
Date: Thu Jul 14 19:09:42 2011
New Revision: 2895

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=2895
Log:
Added chado

Modified:
    projects/med/trunk/debian-med/tasks/bio-dev

Modified: projects/med/trunk/debian-med/tasks/bio-dev
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio-dev?rev=2895&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-dev (original)
+++ projects/med/trunk/debian-med/tasks/bio-dev Thu Jul 14 19:09:42 2011
@@ -225,3 +225,19 @@
 Remark: Given the large amount of code duplication (samtools, tabix), this package
  may be difficult to accept for Debian.  It is nevertheless listed here as it is a
  useable draft, hoping it may be useful to others.
+
+Depends: libchado-perl
+Homepage: http://gmod.org/wiki/Chado
+Vcs-Browser: http://svn.debian.org/viewvc/debian-med/trunk/packages/chado/trunk/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/chado/trunk/
+License: Artistic-2.0
+Pkg-Description: database schema and tools for genomic data
+ Chado is a relational database schema that underlies many GMOD
+ installations. It is capable of representing many of the general
+ classes of data frequently encountered in modern biology such as
+ sequence, sequence comparisons, phenotypes, genotypes, ontologies,
+ publications, and phylogeny. It has been designed to handle complex
+ representations of biological knowledge and should be considered one
+ of the most sophisticated relational schemas currently available in
+ molecular biology. The price of this capability is that the new user
+ must spend some time becoming familiar with its fundamentals.