[Blends-commit] r3064 - /projects/med/trunk/debian-med/tasks/laboratory

[tille at users.alioth.debian.org]

Author: tille
Date: Sat Nov 26 17:48:05 2011
New Revision: 3064

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=3064
Log:
Added catissuesuite

Modified:
    projects/med/trunk/debian-med/tasks/laboratory

Modified: projects/med/trunk/debian-med/tasks/laboratory
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/laboratory?rev=3064&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/laboratory (original)
+++ projects/med/trunk/debian-med/tasks/laboratory Sat Nov 26 17:48:05 2011
@@ -40,3 +40,38 @@
 Published-Year: 2011
 Published-URL: http://www.nature.com/nmeth/journal/v8/n8/full/nmeth.1658.html
 Published-DOI: 10.1038/nmeth.1658
+
+Depends: catissuesuite
+License: to be clarified
+Homepage: https://cabig.nci.nih.gov/tools/catissuesuite
+Pkg-Description:  tool for biospecimen inventory management
+ CaTissue Suite is caBIG's biorepository tool for biospecimen inventory
+ management, tracking, and annotation. This tool permits users to enter
+ and retrieve data concerning the collection, storage, quality assurance,
+ and distribution of biospecimens. caTissue Suite is sufficiently
+ scalable and configurable for deployment across biospecimen resources of
+ varying size and function, and that manage multiple types of
+ biospecimens (tissue, biofluids, nucleic acid).  The tool provides
+ search functionality for both the biorepository staff and research
+ scientist, who may be interested in searching for and requesting
+ biospecimens for correlative science studies.
+ .
+ caTissue Suite features include:
+  * Customizable user roles and privileges structure to support multiple,
+    independent repositories within a single caTissue installation.
+  * Collection Protocol template creation allows representation of pre-defined
+    specimen processing schemes and multiple study arms and time points in
+    order to expedite data entry.
+  * Patient study registration with duplicate patient checking algorithm.
+  * Facilitated specimen accessioning, recording of processing events,
+    creation and recording of biospecimen derivatives and aliquots.
+  * Recording of biospecimen shipping and tracking events across repositories
+    in a single caTissue installation.
+  * Improved data form display for custom annotations (Dynamic Extensions
+    tool), including new CAP checklist based forms for pathology annotation
+    of major organ systems.
+  * caTIES-like pathology report text annotation.
+  * Advanced Query “Wizard”, allowing for the creation and saving of complex
+    queries which can be run as pre-defined or parameterized searches.
+  * Searches based on temporal relationships.
+  * Specimen requisition and request tracking.