[Blends-commit] r3153 - /projects/med/trunk/debian-med/tasks/bio-ngs

[tille at users.alioth.debian.org]

Author: tille
Date: Sat Feb 18 19:25:05 2012
New Revision: 3153

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=3153
Log:
Removed extra infromation about cufflinks and set "X-References_in_debian_upstream: yes" for mira-assembler (Information somehow did not yet propagated to UDD)

Modified:
    projects/med/trunk/debian-med/tasks/bio-ngs

Modified: projects/med/trunk/debian-med/tasks/bio-ngs
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio-ngs?rev=3153&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-ngs (original)
+++ projects/med/trunk/debian-med/tasks/bio-ngs Sat Feb 18 19:25:05 2012
@@ -30,17 +30,9 @@
 Depends: qiime
 
 Depends: cufflinks
-Homepage: http://cufflinks.cbcb.umd.edu/
-Vcs-Git: http://git.debian.org/?p=debian-med/cufflinks.git
-License: Boost
-Pkg-Description: Transcript assembly, differential expression, and differential regulation for RNA-Seq
- Cufflinks assembles transcripts, estimates their abundances, and tests for
- differential expression and regulation in RNA-Seq samples. It accepts aligned
- RNA-Seq reads and assembles the alignments into a parsimonious set of
- transcripts. Cufflinks then estimates the relative abundances of these
- transcripts based on how many reads support each one. 
 
 Depends: mira-assembler
+X-References_in_debian_upstream: yes
 Published-Title: Using the miraEST Assembler for Reliable and Automated mRNA Transcript Assembly and SNP Detection in Sequenced ESTs
 Published-Authors: Chevreux B, Pfisterer T, Drescher B, Driesel AJ, Müller WE, Wetter T, Suhai S.
 Published-In: Genome Res. Jun;14(6):1147-59.