[Blends-commit] r3387 - /projects/med/trunk/debian-med/tasks/bio

[tille at users.alioth.debian.org]

Author: tille
Date: Tue Jun  5 06:49:46 2012
New Revision: 3387

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=3387
Log:
Mugsy now available in SVN

Modified:
    projects/med/trunk/debian-med/tasks/bio

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=3387&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Tue Jun  5 06:49:46 2012
@@ -375,6 +375,8 @@
 Depends: mage2tab
 
 Depends: molekel
+
+Depends: mugsy
 
 Depends: ngila
 
@@ -2753,20 +2755,6 @@
  sequence files and allows to use protein homology information in the
  prediction. The MediGRID requires an instant easy registration by email
  for first-time users.
-
-Depends: mugsy
-Homepage: http://mugsy.sourceforge.net/
-License: Artistic License 2.0
-Pkg-Description: multiple whole genome aligner
- Mugsy is a multiple whole genome aligner. Mugsy uses Nucmer for pairwise
- alignment, a custom graph based segmentation procedure for identifying
- collinear regions, and the segment-based progressive multiple alignment
- strategy from Seqan::TCoffee. Mugsy accepts draft genomes in the form
- of multi-FASTA files and does not require a reference genome.
-Published-Title: Mugsy: fast multiple alignment of closely related whole genomes
-Published-Authors: Angiuoli SV, Salzberg SL
-Published-In: Bioinformatics
-Published-Year: 2011
 
 Depends: apollo
 Homepage: http://gmod.org/wiki/Apollo