[Blends-commit] r3353 - in /projects/med/trunk/debian-med/tasks: bio bio-phylogeny

[tille at users.alioth.debian.org]

Author: tille
Date: Thu May 24 08:47:38 2012
New Revision: 3353

URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=3353
Log:
Remove redundant information about patristic and also mention it in bio task

Modified:
    projects/med/trunk/debian-med/tasks/bio
    projects/med/trunk/debian-med/tasks/bio-phylogeny

Modified: projects/med/trunk/debian-med/tasks/bio
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio?rev=3353&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio (original)
+++ projects/med/trunk/debian-med/tasks/bio Thu May 24 08:47:38 2012
@@ -343,6 +343,9 @@
 Language: Java
 
 Depends: pal2nal
+
+Depends: patristic
+Language: Java
 
 X-Mark: The information below needs to be checked whether it can be obtained from Vcs or needs to stay here
 

Modified: projects/med/trunk/debian-med/tasks/bio-phylogeny
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/bio-phylogeny?rev=3353&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/bio-phylogeny (original)
+++ projects/med/trunk/debian-med/tasks/bio-phylogeny Thu May 24 08:47:38 2012
@@ -252,20 +252,7 @@
  candidate models best fits the data at hand.
 
 Depends: patristic
-License: GPL3
-Homepage: ftp://ftp.bioinformatics.org/pub/patristic/
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/patristic/trunk
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/patristic/trunk/
 Language: Java
-Pkg-Description: Calculate patristic distances and comparing the components of genetic change
- Patristic overcomes some logistic barriers to analysing signals in
- sequences. In additional to calculating patristic distances, it provides
- plots for any combination of matrices, calculates commonly used
- statistics, allows data such as isolation dates to be entered and
- reorders matrices with matching species or gene labels. It will be used
- to analyse rates of mutation and substitutional saturation and the
- evolution of viruses.
-Published-URL: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1352388/
 
 Depends: phy-spread
 Remark: Name space conflict