[Blends-commit] [SCM] science branch, d_control, updated. 994bf1f79327e80386baf99372b597dc19469afd
Andreas Tille
tille at debian.org
Mon Nov 25 21:42:43 UTC 2013
The following commit has been merged in the d_control branch:
commit 994bf1f79327e80386baf99372b597dc19469afd
Author: Andreas Tille <tille at debian.org>
Date: Mon Nov 25 22:42:28 2013 +0100
d/control of version 0.5
diff --git a/0.4/control b/0.5/control
similarity index 67%
copy from 0.4/control
copy to 0.5/control
index 02577ee..9c0d487 100644
--- a/0.4/control
+++ b/0.5/control
@@ -1,4 +1,4 @@
-XS-Comment: This file is autogenerated via make -f debian/rules dist. Do not edit!
+# This file is autogenerated via make -f debian/rules dist. Do not edit!
Source: debian-science
Section: misc
Priority: extra
@@ -7,7 +7,7 @@ DM-Upload-Allowed: yes
Uploaders: Frederic Daniel Luc Lehobey <Frederic at Lehobey.net>,
Andreas Tille <tille at debian.org>, Sylvestre Ledru <sylvestre.ledru at inria.fr>
Build-Depends-Indep: blends-dev (>= 0.6.1), debhelper (>= 6.0.7)
-Standards-Version: 3.8.0
+Standards-Version: 3.8.1
Homepage: http://wiki.debian.org/DebianScience/
Vcs-Browser: http://svn.debian.org/wsvn/blends/projects/science/trunk/debian-science/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/blends/projects/science/trunk/debian-science/
@@ -16,7 +16,9 @@ Package: science-tasks
Architecture: all
Depends: tasksel
Description: Debian Science tasks for tasksel
- This package provides Debian Science tasks in tasksel.
+ This package is part of the Debian Pure Blend "Debian Science" and provides
+ additional tasks for tasksel. If this package will be installed all tasks
+ which are provided by Debian Science will be added to the tasksel menu.
Package: science-config
Architecture: all
@@ -42,6 +44,8 @@ Description: Debian Science Project config package
* science-mathematics packages related to mathematics
* science-mathematics-dev packages related to development of
mathematical applications
+ * science-neuroscience-cognitive packages related to cognitive
+ neuroscience
* science-physics packages related to physics
* science-robotics packages related to robotics
.
@@ -63,8 +67,8 @@ Description: Debian Science Project config package
Package: science-astronomy
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: astronomical-almanac, fv, gcx, gpredict, libcfitsio3, lightspeed, openuniverse, saods9, sextractor, slang-cfitsio, ssystem, stellarium, xorsa, xplanet
-Suggests: boinc-app-milkyway, linoccult, midas, orbfit, pdl, pgplot5, python-scientific, spacechart, stars, sunclock, worldwind, xephem, xtide, xtide-data, yorick
+Recommends: astronomical-almanac, fv, gcx, gpredict, libcfitsio3, lightspeed, openuniverse, saods9, sextractor, slang-cfitsio, ssystem, stardata-common, stellarium, xorsa, xplanet
+Suggests: boinc-app-milkyway, gliese, linoccult, midas, orbfit, pdl, pgplot5, python-scientific, spacechart, stars, sunclock, worldwind, xephem, xtide, xtide-data, yale, yorick
Description: Debian Science Astronomy packages
This metapackage will install Debian Science packages related to
Astronomy. You might also be interested in field::astronomy debtag
@@ -92,12 +96,19 @@ Suggests: bauble, med-bio-dev
Description: Debian Science Biology packages
This metapackage will install Debian Science packages related to
Biology. You might also be interested in the field::biology debtag.
+ .
+ This metapackage makes use of the packages med-bio and med-bio-dev
+ (for development of biological applications) which are maintained
+ by Debian Med - another Debian Pure Blend. If you are a biologist
+ you are most probably interested in the Debian Med project which
+ deals with biology and medicine in much more detail then the more
+ general Debian Science.
Package: science-chemistry
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: adun.app, apbs, avogadro, bkchem, bodr, chemeq, chemical-mime-data, chemtool, easychem, gabedit, galculator, garlic, gausssum, gchempaint, gcrystal, gcu-bin, gcu-plugin, gdis, gdpc, gelemental, ghemical, gperiodic, gromacs | gromacs-lam | gromacs-mpich | gromacs-openmpi, kalzium, katomic, libcdk-java, mopac7-bin, mpqc, mpqc-support, openbabel, polyxmass, psi3, pymol, python-openbabel, rasmol, v-sim, viewmol, xbs, xdrawchem, xmakemol-gl | xmakemol
-Suggests: drawxtl, gamgi, gdpc-examples, jmol, libegad, libint, molden, molekel, qutemol, tinker
+Recommends: adun.app, apbs, avogadro, bkchem, bodr, chemeq, chemical-mime-data, chemtool, easychem, gabedit, galculator, gamgi, garlic, gausssum, gchempaint, gcrystal, gcu-bin, gcu-plugin, gdis, gdpc, gelemental, ghemical, gperiodic, gromacs | gromacs-lam | gromacs-mpich | gromacs-openmpi, kalzium, katomic, libcdk-java, mopac7-bin, mpqc, mpqc-support, openbabel, psi3, pymol, python-openbabel, rasmol, v-sim, viewmol, xbs, xdrawchem, xmakemol-gl | xmakemol
+Suggests: cp2k, drawxtl, gdpc-examples, jmol, libegad, libint, molden, molekel, polyxmass, qutemol, tinker
Description: Debian Science Chemistry packages
This metapackage will install Debian Science packages related to
Chemistry. You might also be interested in the field::chemistry
@@ -128,15 +139,20 @@ Description: Debian Science Electronics packages
Package: science-engineering
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: gerris, gmsh, libmesh-dev, netgen, pythoncad, qcad, sailcut, tochnog, varkon
-Suggests: avl, brlcad, code-aster, code-saturne, freecad, libmesh0.6.2-dev, opencascade-tools, openturns, salome
+Recommends: gerris, gmsh, libmesh0.6.2-dev, pythoncad, qcad, sailcut
+Suggests: avl, brlcad, code-aster, code-saturne, freecad, libmesh-dev, netgen, opencascade-tools, openturns, salome, tochnog, varkon, z88
Description: Debian Science Engineering packages
- This metapackage will install Debian Science packages related to Engineering.
+ This metapackage is part od the Debian Pure Blend "Debian Science"
+ and installs packages related to Engineering.
+ .
+ Please not that there is an additional package engineering-dev
+ which depends from packages which are useful to develop engineering
+ related software.
Package: science-engineering-dev
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: libalberta2-dev, libcgns-dev, libfvm-dev
+Recommends: libalberta2-dev, libcgns-dev, libfvm-dev, libitpp-dev
Description: Debian Science Engineering-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Engineering. Please note
@@ -149,8 +165,8 @@ Description: Debian Science Engineering-dev packages
Package: science-geography
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: avce00, drawmap, e00compr, earth3d, gdal-bin, geoip-bin, gmt, gosmore, gpsbabel, gpsd, gpsd-clients, gpsdrive, gpsman, gpsmanshp, gpstrans, gpx2shp, grace6, grass, grass-doc, iceweasel, josm, josm-plugins, mapnik-utils, mapserver-bin, merkaartor, mozilla-plugin-gnash, ogdi-bin, openscenegraph, pgadmin3, php5-mapscript, phppgadmin, postgis, postgresql-8.3-postgis, proj, python-mapnik, r-base, r-cran-mapdata, r-cran-maps, swfdec-mozilla, thuban, viking
-Suggests: gis-workstation, googleearth-package, mapnik-viewer, openjump, osm-tools, osmarender, qgis, qgis-plugin-grass, r-cran-mapproj, renderathome
+Recommends: avce00, drawmap, e00compr, earth3d, gdal-bin, geoip-bin, gmt, gosmore, gpsbabel, gpsd, gpsd-clients, gpsdrive, gpsman, gpsmanshp, gpstrans, gpx2shp, grace6, grass, grass-doc, iceweasel, josm, josm-plugins, mapnik-utils, mapserver-bin, merkaartor, mozilla-plugin-gnash, ogdi-bin, openscenegraph, pgadmin3, php5-mapscript, phppgadmin, postgis, postgresql-8.3-postgis, python-mapnik, r-base, r-cran-mapdata, r-cran-maps, swfdec-mozilla, thuban, viking
+Suggests: gis-workstation, googleearth-package, mapnik-viewer, openjump, osm-tools, osmarender, proj-bin, qgis, qgis-plugin-grass, r-cran-mapproj, r-cran-sp, renderathome
Description: Debian Science Geography packages
This metapackage will install Debian Science packages related to
Geography. You might also be interested in the field::geography
@@ -172,14 +188,16 @@ Package: science-linguistics
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: apertium, link-grammar, wordnet
+Suggests: artha
Description: Debian Science Linguistics packages
- This metapackage will install Debian Science packages related to Linguistics.
+ This metapackage is part of the Debian Pure Blend "Debian Science"
+ and installs packages related to Linguistics.
Package: science-mathematics
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: axiom, coq, freefem, freemat, gap, geomview, gerris, ginac-tools, gmsh, libmatheval1, lp-solve, magnus, netgen, octave3.0, octaviz, pari-extra, pari-gp, proofgeneral, proofgeneral-coq, regina-normal, sagemath, science-statistics, snappea, wxmaxima, xmaxima
-Suggests: Isabelle, geogebra, netgen-doc, octave, scilab, sivp
+Recommends: axiom, coq, freefem, freemat, gap, geomview, gerris, ginac-tools, gmsh, libmatheval1, lp-solve, magnus, octave3.0, octaviz, pari-extra, pari-gp, proofgeneral, proofgeneral-coq, regina-normal, science-statistics, snappea, wxmaxima, xmaxima
+Suggests: geogebra, isabelle, netgen, netgen-doc, octave, sagemath, scilab, sivp
Description: Debian Science Mathematics packages
This metapackage will install Debian Science packages related to
Mathematics. You might also be interested in the field::mathematics
@@ -189,8 +207,8 @@ Description: Debian Science Mathematics packages
Package: science-mathematics-dev
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: libarpack2-dev, libatlas-base-dev, libblas-dev, libblitz0-dev, libglpk0, libgsl0-dev, libjama-dev, liblapack-dev, liblip-dev, libmatheval1-dev, libmatio-dev, libnetgen-dev, libranlip-dev, libsuperlu3, libtnt-dev, python-numpy, python-scikits-openopt
-Suggests: libcgal-dev, libmesh0.6.1, libslepc2.3.2, libtet1.4.2-dev
+Recommends: libarpack2-dev, libatlas-base-dev, libblas-dev, libblitz0-dev, libglpk-dev, libgsl0-dev, libjama-dev, liblapack-dev, liblip-dev, libmatheval1-dev, libmatio-dev, libmesh0.6.2-dev, libranlip-dev, libsuperlu3-dev, libtnt-dev, python-numpy, python-scikits-openopt
+Suggests: libcgal-dev, libitpp-dev, libnetgen-dev, libslepc2.3.2-dev, libtet1.4.2-dev
Description: Debian Science Mathematics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics. Please note
@@ -200,11 +218,29 @@ Description: Debian Science Mathematics-dev packages
.
You might also be interested in the science-mathematics metapackage.
+Package: science-neuroscience-cognitive
+Architecture: all
+Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
+Recommends: amide, dicomnifti, fslview, medcon, minc-tools, nifti-bin, praat, python-mvpa, python-nifti, python-pyepl, xmedcon
+Suggests: afni, bioimagesuite, brainvisa, caret, dicom3tools, fsl, lipsia, mni-autoreg, mni-n3, openmeeg, python-psychopy, science-typesetting, slicer
+Description: Debian Science packages for Cognitive Neuroscience
+ This metapackage will install Debian packages which might be useful for
+ scientists doing cognitive neuroscience research. This comprises the full
+ research process from conducting psychophysical experiments, over data
+ acquisition and analysis, to visualization and typesetting of scientific
+ results.
+ .
+ The selection of packages is targeting the application of analysis
+ techniques. Methods developers are refered to the science-statistics,
+ science-imageanalysis, science-numericalcomputation, med-imaging, and
+ med-imaging-dev metapackages for a variety of additional software that
+ might be useful in the context of cognitive neuroscience.
+
Package: science-numericalcomputation
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: freemat, gnudatalanguage, ipython, octave3.0, pdl, python-matplotlib, python-numpy, python-scipy, r-base, yorick
-Suggests: octave, octave3.1, octaviz, scilab
+Suggests: octave, octave3.1, octavede, octaviz, scilab
Description: Debian Science Numerical Computation packages
This metapackage will install Debian Science packages useful for
numerical computation. The packages provide an array oriented
@@ -215,8 +251,8 @@ Description: Debian Science Numerical Computation packages
Package: science-physics
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: abinit, axiom, cernlib, feynmf, fityk, geant321, gerris, gnudatalanguage, gpiv, gpivtools, ipython, maxima, octave3.0, octaviz, paw, paw++, pdl, python-matplotlib, python-scipy, python-sympy, root-system, science-electronics, tessa | tessa-mpi, v-sim
-Suggests: blzpack, cadabra, clhep2, drawxtl, gate, geant4, horae, ifeffit, jfreemesh, meshlab, octave, octave3.1, opencascade-tools, openfoam, paw-demos, science-mathematics, science-statistics, scilab, sivp, sixpack, spis
+Recommends: abinit | mpqc | openmx | psi3, axiom, cernlib, feynmf, fityk, geant321, gerris, gpiv, gpivtools, maxima, octaviz, paw, paw++, python-sympy, root-system, science-electronics, science-numericalcomputation, tessa | tessa-mpi, v-sim
+Suggests: ESPResSo++, PWscf, blzpack, cadabra, clhep2, cp2k, drawxtl, gate, geant4, horae, ifeffit, jfreemesh, meshlab, opencascade-tools, openfoam, paw-demos, pymca, quantumespresso, science-mathematics, science-statistics, sivp, sixpack, spis
Description: Debian Science Physics packages
This metapackage will install Debian Science packages related to Physics.
You might also be interested in the debtag field::physics and, depending on
@@ -225,24 +261,32 @@ Description: Debian Science Physics packages
Package: science-robotics
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: gnuplot, libboost-dev, libcoin40-runtime, libcomedi0, libcv1, libvtk5, octave3.0, robot-player, rtai, xenomai-runtime
+Recommends: gnuplot, libboost-dev, libcoin40-runtime, libcomedi0, libcv1, libopenigtlink1, libvtk5, octave3.0, robot-player, rtai, xenomai-runtime
Suggests: d-collide, mrtp, octave, octave3.1, ode, orca, orocos-bfl, orocos-kdl, orocos-ocl, orocos-rtt, roboop, rtnet, solid
Description: Debian Robotics packages
- This metapackage will install Debian Science packages related to Robotics.
+ This metapackage is part of the Debian Pure Blend "Debian Science"
+ and installs packages related to Robotics.
+ .
+ You might also be interested in the science-engineering metapackage.
Package: science-statistics
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: ess, littler, psignifit, python-stats, r-cran-abind, r-cran-acepack, r-cran-bayesm, r-cran-boot, r-cran-cairodevice, r-cran-car, r-cran-chron, r-cran-cluster, r-cran-coda, r-cran-codetools, r-cran-date, r-cran-dbi, r-cran-design, r-cran-eco, r-cran-effects, r-cran-fbasics, r-cran-fcalendar, r-cran-fcopulae, r-cran-fecofin, r-cran-fextremes, r-cran-fmultivar, r-cran-foptions, r-cran-foreign, r-cran-fportfolio, r-cran-fseries, r-cran-gdata, r-cran-gmodels, r-cran-gplots, r-cran-gregmisc, r-cran-gtools, r-cran-hdf5, r-cran-hmisc, r-cran-its, r-cran-kernsmooth, r-cran-lattice, r-cran-latticeextra, r-cran-lme4, r-cran-lmtest, r-cran-mapdata, r-cran-maps, r-cran-matchit, r-cran-matrix, r-cran-mcmcpack, r-cran-mgcv, r-cran-misc3d, r-cran-mnp, r-cran-multcomp, r-cran-mvtnorm, r-cran-nlme, r-cran-pscl, r-cran-psy, r-cran-qtl, r-cran-quadprog, r-cran-rcmdr, r-cran-relimp, r-cran-rggobi, r-cran-rgl, r-cran-rgtk2, r-cran-rmetrics, r-cran-rmpi, r-cran-rmysql, r-cran-rodbc, r-cran-rpart, r-cran-rpvm, r-cran-rquantlib, r-cran-rserve, r-cran-rsprng, r-cran-sandwich, r-cran-sm, r-cran-snow, r-cran-strucchange, r-cran-survival, r-cran-tkrplot, r-cran-tseries, r-cran-vgam, r-cran-vr, r-cran-xml, r-cran-zelig, r-cran-zoo, r-other-gking-matchit, r-recommended, rkward
-Suggests: r-cran-mapproj, r-cran-msm, science-mathematics
+Recommends: ess, littler, psignifit, python-stats, r-cran-abind, r-cran-acepack, r-cran-bayesm, r-cran-boot, r-cran-cairodevice, r-cran-car, r-cran-chron, r-cran-cluster, r-cran-coda, r-cran-codetools, r-cran-date, r-cran-dbi, r-cran-design, r-cran-eco, r-cran-effects, r-cran-fbasics, r-cran-fcalendar, r-cran-fcopulae, r-cran-fecofin, r-cran-fextremes, r-cran-fmultivar, r-cran-foptions, r-cran-foreign, r-cran-fportfolio, r-cran-fseries, r-cran-gdata, r-cran-gmodels, r-cran-gplots, r-cran-gregmisc, r-cran-gtools, r-cran-hdf5, r-cran-hmisc, r-cran-its, r-cran-kernsmooth, r-cran-lattice, r-cran-latticeextra, r-cran-lme4, r-cran-lmtest, r-cran-mapdata, r-cran-maps, r-cran-matchit, r-cran-matrix, r-cran-mcmcpack, r-cran-mgcv, r-cran-misc3d, r-cran-mnp, r-cran-multcomp, r-cran-mvtnorm, r-cran-nlme, r-cran-pscl, r-cran-psy, r-cran-qtl, r-cran-quadprog, r-cran-rcmdr, r-cran-relimp, r-cran-rggobi, r-cran-rgl, r-cran-rgtk2, r-cran-rmetrics, r-cran-rmpi, r-cran-rmysql, r-cran-rodbc, r-cran-rpart, r-cran-rpvm, r-cran-rquantlib, r-cran-rserve, r-cran-rsprng, r-cran-sandwich, r-cran-sm, r-cran-snow, r-cran-strucchange, r-cran-survival, r-cran-tkrplot, r-cran-tseries, r-cran-vgam, r-cran-vr, r-cran-xml, r-cran-zelig, r-cran-zoo, r-recommended, rkward
+Suggests: r-cran-mapproj, r-cran-msm, r-other-gking-matchit, science-mathematics
Description: Debian Science Statistics packages
- This metapackage will install Debian Science packages related to Statistics.
+ This metapackage is part of the Debian Pure Blend "Debian Science"
+ and installs packages related to statistics. This task is a general
+ task which might be useful for any scientific work. It depends from
+ a lot of R packages as well as from other tools which are useful to
+ do statistics. Moreover the Science Mathematics task is suggested
+ to optionally install all mathematics related software.
Package: science-typesetting
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: auctex, bibutils, dia, diploma, feynmf, impose+, kbibtex, lyx, pybliographer, referencer, texlive, texlive-bibtex-extra, texlive-math-extra, texlive-publishers, texlive-science, texmacs, texmacs-extra-fonts, transfig, xfig
-Suggests: bibus, gpapers, jabref, jeuclid, latexdiff, mlpost, openoffice.org-dmaths, quaneko, tellico, texmaker, zotero
+Recommends: auctex, bibus, bibutils, dia, diploma, feynmf, impose+, kbibtex, lyx, pybliographer, referencer, texlive, texlive-bibtex-extra, texlive-math-extra, texlive-publishers, texlive-science, texmacs, texmacs-extra-fonts, transfig, xfig
+Suggests: csv2latex, gpapers, jabref, jeuclid, latexdiff, mlpost, openoffice.org-dmaths, quaneko, r-cran-xtable, tellico, texmaker, zotero
Description: Debian Science typesetting packages
This metapackage will install Debian Science packages related to
typesetting. You might also be interested in the use::typesetting
@@ -251,8 +295,8 @@ Description: Debian Science typesetting packages
Package: science-viewing
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: fityk, g3data, gnudatalanguage, gnuplot, grace, graphviz, gri, gwyddion, ifrit, imview, kst, labplot, mayavi, med-imaging, paraview, pdl, plotdrop, python-scientific, pyxplot, yorick
-Suggests: cassandra, findimagedupes, libgtkdatabox, libgtkdatabox-0.9.0-0, libgtkdatabox-0.9.0-1, libpuzzle-bin, pgplot5, teem
+Recommends: fityk, g3data, gnudatalanguage, gnuplot, grace, graphviz, gri, gwyddion, ifrit, imview, kst, labplot, mayavi, paraview, pdl, plotdrop, python-scientific, pyxplot, yorick
+Suggests: cassandra, findimagedupes, libgtkdatabox, libgtkdatabox-0.9.0-0, libgtkdatabox-0.9.0-1, libpuzzle-bin, med-imaging, pgfplots, pgplot5, r-cran-colorspace, r-cran-plotrix, teem, texlive-pictures
Description: Debian Science data visualisation packages
This metapackage will install Debian Science packages related to data
visualization. You might also be interested in the use::viewing
--
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