[Blends-commit] [SCM] pan branch, master, updated. b99917610ec5fc42237e7f1d4ea191367cecb620
Frédéric-Emmanuel PICCA
picca at synchrotron-soleil.fr
Mon Sep 2 11:58:45 UTC 2013
The following commit has been merged in the master branch:
commit b99917610ec5fc42237e7f1d4ea191367cecb620
Author: Frédéric-Emmanuel PICCA <picca at synchrotron-soleil.fr>
Date: Mon Sep 2 13:58:39 2013 +0200
remove redundant informations already extracted from udd.
diff --git a/tasks/microscopy b/tasks/microscopy
index 3c26fe4..6169740 100644
--- a/tasks/microscopy
+++ b/tasks/microscopy
@@ -5,14 +5,4 @@ Comment: Improve the description
Depends: gwyddion
-Suggests: threeb
-Homepage: http://www.coxphysics.com/3b
-License: GPL3+
-Vcs-Git: git://anonscm.debian.org/debian-science/packages/threeb.git
-Pkg-Description: 3B Microscopy Analysis Software. Bayesian analysis of
- blinking and bleaching, or 3B microscopy, is a method which analyses
- data in which many overlapping fluorophores undergo bleaching and
- blinking events, giving the structure at enhanced resolution. By
- using a Hidden Markov Model (HMM), it allows useful information to be
- obtained from data that would be impossible to analyse with standard
- localisation analysis techniques.
+Suggests: threeb
\ No newline at end of file
diff --git a/tasks/mx-dev b/tasks/mx-dev
index d928384..4dbbeae 100644
--- a/tasks/mx-dev
+++ b/tasks/mx-dev
@@ -6,106 +6,12 @@ Description: Debian PAN Macro-Molecular diffraction development packages
.
You might also be interested in the mx metapackage.
-Suggests: ccif
-Homepage: http://www.ccp4.ac.uk/
-License: LGPL-3
-Vcs-Git: git://anonscm.debian.org/debian-science/packages/ccif.git
-Pkg-Description: the core mmCIF library routines
- Peter Keller's C language library of routines for reading and writing
- mmCIF files was included in release 4.0 of the CCP4 suite. These
- routines are used by the CCP4 library routines. For those wishing to
- use libccif to read/write mmCIF files, there is a Fortran-callable
- interface.
+Suggests: libccif-dev
-Suggests: libccp4
-WNPP: 721529
-License: LGPL-3
-Vcs-Git: git://anonscm.debian.org/debian-science/packages/libccp4.git
-Homepage: http://www.ccp4.ac.uk/
-Pkg-Description: CCP4 core functionality - C runtime
- The CCP4 software suite is based around a library of routines which
- cover common tasks, such as file opening, parsing keyworded input,
- reading and writing of standard data formats, applying symmetry
- operations, etc. Programs in the suite call these routines which, as
- well as saving the programmer some effort, ensure that the varied
- programs in the suite have a similar look-and-feel.
- .
- The library contains several sub components:
- .
- * CMTZ library -- Contains a variety of functions for manipulating
- the data structure, for example adding crystals, datasets or
- columns. The data structure can be dumped to an output MTZ data
- file.
- .
- * CMAP library -- Functions defining the C-level API for accessing
- CCP4 map files.
- .
- * CSYM library -- a collection of functions centered around a data
- file syminfo.lib which is auto-generated from sgtbx (the Space
- Group Toolbox of cctbx).
- .
- * CCP4 utility library -- many utility functions which either give
- specific CCP4 or platform independent functionality.
- .
- * CCP4 Parser library -- provides CCP4-style parsing, as used for
- processing keywords of CCP4 programs, MTZ header records, etc.
- .
- * CCP4 resizable arrays -- defines an object and methods which looks
- just like a simple C array, but can be resized at will without
- incurring excessive overheads. This package contains the shared
- library components needed for programs that have been compiled with
- the libccp4 library.
- .
- This package provides the runtime of the CCP4 C library.
+Suggests: libccp4-dev
-Suggests: clipper
-Homepage: http://www.ccp4.ac.uk/
-Vcs-Git: git://anonscm.debian.org/debian-science/packages/clipper.git
-Pkg-Description: object oriented library for crystallographic computing
- The aim of the clipper project is to produce a set of object-oriented
- libraries for the organisation of crystallographic data and the
- performance of crystallographic computation.
- .
- This package contains shared libraries needed to run programs that
- have been developed using the clipper libraries.
+Suggests: libclipper-dev
-Suggests: mmdb
-WNPP: 679982
-License: LGPL-3
-Vcs-Git: git://anonscm.debian.org/debian-science/packages/mmdb.git
-Homepage: http://www.ccp4.ac.uk/
-Pkg-Description: macromolecular coordinate library
- MMDB is designed to assist developers in working with macromolecular
- coordinate files. The library handles both PDB and mmCIF format files.
- .
- The Library also features an internal binary format, portable between
- different platforms. This is achieved at uniformity of the Library's
- interface functions, so there is no difference in handling different
- formats.
- .
- MMDB provides various high-level tools for working with coordinate files,
- including reading and writing, orthogonal-fractional transforms,
- generation of symmetry mates, editing the molecular structure and more.
- .
- This package contains the shared library components needed for programs
- that have been linked to the mmdb library.
+Suggests: libmmdb-dev
-Suggests: ssm
-Homepage: http://www.ccp4.ac.uk/
-Pkg-Description: macromolecular superposition library
- SSM is a macromolecular coordinate superposition library, written by
- Eugene Krissinel of the EBI.
- .
- The library implements the SSM algorithm of protein structure
- comparison in three dimensions, which includes an original procedure
- of matching graphs built on the protein's secondary-structure
- elements, followed by an iterative three-dimensional alignment of
- protein backbone Calpha atoms.
- .
- The algorithm implemented by the software is described in:
- E. Krissinel & K. Henrick (2004) Secondary-structure matching (SSM), a
- new tool for fast protein structure alignment in three dimensions.
- Acta Crystallogr D Biol Crystallogr. 60, 2256-68.
- .
- This package contains the shared library components needed for programs
- that have been compiled with the ssm library.
\ No newline at end of file
+Suggests: libssm-dev
\ No newline at end of file
--
Debian Pan
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