[Blends-commit] [SCM] science branch, master, updated. b3b82d4eb2557874f8a627856d57b52d0170f7f1
Andreas Tille
tille at debian.org
Thu Jan 16 11:02:18 UTC 2014
The following commit has been merged in the master branch:
commit b3b82d4eb2557874f8a627856d57b52d0170f7f1
Author: Andreas Tille <tille at debian.org>
Date: Thu Jan 16 11:56:15 2014 +0100
Rerun Blends framework to regenerate changed dependencies
diff --git a/debian/changelog b/debian/changelog
index ac9badd..68ecd7e 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -39,7 +39,7 @@ debian-science (1.1) UNRELEASED; urgency=low
Suggests: python-dap
-science-robotics
added:
- Depends: libboost-dev, gnuplot, libcv-dev, octave, libode-dev, libvtk5.4, libcoin60-runtime
+ Depends: libboost-dev, gnuplot, libcomedi0, libopenigtlink1, libcv-dev, octave, libode-dev, libvtk5.4, libcoin60-runtime
removed:
Depends: openhrp, choreonoid, openrtm, liburdfdom-tools, openrave, pcl, ros, gazebo
Suggests: gnuplot, ompl-demos, octave, libvtk5.4, libcoin60-runtime, arduino-mk
@@ -71,10 +71,10 @@ debian-science (1.1) UNRELEASED; urgency=low
Suggests: libgpib-bin
-science-statistics
added:
- Depends: r-cran-rmetrics, r-other-gking-matchit, r-cran-fseries
+ Depends: r-cran-rmetrics, r-other-gking-matchit, r-cran-fseries, r-cran-vr
Suggests: pandas
removed:
- Depends: r-cran-deldir, r-cran-fastcluster, r-cran-spatstat, r-cran-timedate, python-pandas, r-cran-spam, r-cran-statmod, r-cran-permute, r-cran-lhs
+ Depends: r-cran-deldir, r-cran-fastcluster, r-cran-spatstat, r-cran-timedate, python-pandas, r-cran-spam, r-cran-statmod, r-cran-mass, r-cran-permute, r-cran-lhs
Suggests: libtamuanova-dev
-science-imageanalysis
added:
@@ -88,11 +88,11 @@ debian-science (1.1) UNRELEASED; urgency=low
Suggests: ask
-science-mathematics-dev
added:
- Depends: libslepc3.0.0-dev
- Suggests: givaro-users-doc
+ Depends: libmei-dev, libcneartree3-dev, libslepc3.0.0-dev
+ Suggests: givaro-users-doc, libopenturns-dev, python-openturns, openturns-wrapper
removed:
- Depends: libann-dev, libfftw3-dev, libarpack++2-dev, libdouble-conversion-dev, libscscp1-dev, libzn-poly-dev, python-dolfin, libfeel++-dev, liblfunction-dev, libtachyon-dev, libeigen3-dev, liblbfgs-dev, libmpfrc++-dev, libsymmetrica-dev, libalglib-dev, fftw-dev, libpynac-dev, libeinspline-dev, libnfft3-dev, minpack-dev, libec-dev, libsuitesparse-metis-dev, sfftw-dev, libslepc3.4.2-dev, libgnuplot-iostream-dev, libparmetis-dev, libtet1.4-dev, libqcustomplot-dev, libfplll-dev, libratpoints-dev, libviennacl-dev, python-numexpr | python3-numexpr, libflann-dev, libcdd-dev, liblinbox-dev, libquadrule-dev, libm4ri-dev, libdune-grid-dev, libgf2x-dev, libopenblas-dev, libigraph0-dev, libiml-dev, python-linop | python3-linop, python-ferari, libm4rie-dev, libqhull-dev, libcminpack-dev, libdogleg-dev, liblrcalc-dev, gap-dev, python-glpk, python-fftw3, libglpk-java
- Suggests: libdune-localfunctions-dev, givaro-user-doc, libcliquer-dev, libjlapack-java, libcneartree-dev, libntl-dev, libmtj-java, libnetlib-java, libdune-istl-dev
+ Depends: libann-dev, libfftw3-dev, libarpack++2-dev, libdouble-conversion-dev, libscscp1-dev, libzn-poly-dev, python-dolfin, libfeel++-dev, liblfunction-dev, libtachyon-dev, libeigen3-dev, liblbfgs-dev, code-saturne-bin, libmpfrc++-dev, libsymmetrica-dev, libalglib-dev, libdogleg-dev, fftw-dev, libpynac-dev, libeinspline-dev, libnfft3-dev, minpack-dev, libec-dev, libsuitesparse-metis-dev, sfftw-dev, libslepc3.4.2-dev, libigraph0-dev, libparmetis-dev, libtet1.4-dev, libqcustomplot-dev, libfplll-dev, code-saturne-include, libratpoints-dev, libviennacl-dev, python-numexpr | python3-numexpr, libflann-dev, libcdd-dev, liblinbox-dev, libquadrule-dev, libm4ri-dev, libdune-grid-dev, libgf2x-dev, libopenturns-dev, libopenblas-dev, libgnuplot-iostream-dev, libiml-dev, python-linop | python3-linop, python-ferari, python-openturns, libm4rie-dev, libqhull-dev, libcminpack-dev, libcneartree-dev, liblrcalc-dev, gap-dev, python-glpk, python-fftw3, libglpk-java
+ Suggests: openturns-examples, givaro-user-doc, libdune-localfunctions-dev, libcliquer-dev, libjlapack-java, libntl-dev, libmtj-java, libnetlib-java, libdune-istl-dev
-science-highenergy-physics-dev
added:
Depends: libhepmcinterface-dev
@@ -114,11 +114,11 @@ debian-science (1.1) UNRELEASED; urgency=low
Suggests: libqtexengine-dev, luasseq, svgtoipe
-science-engineering-dev
added:
- Depends: libopencascade-dev, libslepc3.0.0-dev, freefoam-dev
+ Depends: libopencascade-dev, libfvm-dev, libslepc3.0.0-dev, freefoam-dev
Suggests: libgtkdatabox-0.9.1-1-dev
removed:
- Depends: libnlopt-dev, libfreefoam-dev, libann-dev, python-fftw3, libflann-dev, libnfft3-dev, libcoin80-dev, python-collada, libslicot-dev, salome-kernel-dev, libtet1.4-dev, liboce-visualization-dev, liboce-ocaf-dev, libslepc3.4.2-dev, libdime-dev, libdxflib-dev, libmetis-edf-dev
- Suggests: libdiet-client2.8-dev, libdiet-admin2.8-dev, libgtkdatabox-0.9.2-0-dev, libdiet-sed2.8-dev, libdiet-dagda2.8-dev
+ Depends: libnlopt-dev, libfreefoam-dev, libann-dev, python-fftw3, libflann-dev, libnfft3-dev, libcoin80-dev, python-collada, libslicot-dev, libdxflib-dev, salome-kernel-dev, libtet1.4-dev, liboce-visualization-dev, code-saturne-bin, liboce-ocaf-dev, libslepc3.4.2-dev, libdime-dev, code-saturne-include, libmetis-edf-dev
+ Suggests: libdiet-client2.8-dev, openturns-examples, libgtkdatabox-0.9.2-0-dev, libdiet-dagda2.8-dev, libdiet-admin2.8-dev, libdiet-sed2.8-dev
-science-viewing
added:
Depends: grits
@@ -131,8 +131,10 @@ debian-science (1.1) UNRELEASED; urgency=low
removed:
Suggests: python-pynn
-science-astronomy-dev
+ added:
+ Depends: libgyoto0-dev
removed:
- Depends: tcl-fitstcl, libivoafits-java, libfits-java, liberfa-dev
+ Depends: tcl-fitstcl, libivoafits-java, libgyoto1-dev, libfits-java, liberfa-dev
-science-astronomy
added:
Depends: heasoft-fv
@@ -146,6 +148,8 @@ debian-science (1.1) UNRELEASED; urgency=low
Depends: libfreefoam-dev, fftw-dev, libnfft3-dev, python-openctm, sfftw-dev, libfftw3-dev, libopenctm-dev, python-fftw3, python-quantities
Suggests: libtriangle-dev
-science-distributedcomputing
+ added:
+ Depends: mpich2
removed:
Depends: mpich
Suggests: octave-mpi
@@ -159,7 +163,7 @@ debian-science (1.1) UNRELEASED; urgency=low
Depends: libfftw3-doc, libopencascade-dev
Suggests: opencascade-draw
removed:
- Depends: fftw-dev, python-fabio, pyfai, sfftw-dev, liboce-visualization-dev, liboce-ocaf-dev, libcbf-dev
+ Depends: fftw-dev, python-fabio, pyfai, sfftw-dev, liboce-visualization-dev, liboce-ocaf-dev, libopenmpi-dev | libmpich-dev, libcbf-dev
Suggests: libfftw3-doc, oce-draw
-science-electrophysiology
added:
@@ -167,11 +171,16 @@ debian-science (1.1) UNRELEASED; urgency=low
removed:
Suggests: python-neo, libbiosig-dev
-science-nanoscale-physics
+ added:
+ Depends: openmpi-doc | mpich2-doc | mpi-doc, libopenmpi1.3 | libmpich2-1.2 | libmpich1.0gf, openmpi-bin | mpich2 | mpich-bin
removed:
- Depends: cbflib-bin
+ Depends: cbflib-bin, openmpi-bin | mpich
+ Suggests: openmpi-doc | mpich-doc | lam-mpidoc
-science-chemistry
+ added:
+ Depends: gromacs | gromacs-lam | gromacs-mpich | gromacs-openmpi
removed:
- Depends: python-mmtk
+ Depends: python-mmtk, gromacs | gromacs-mpich | gromacs-openmpi
-science-physics
added:
Depends: opencascade-draw
@@ -180,9 +189,10 @@ debian-science (1.1) UNRELEASED; urgency=low
Suggests: openctm-tools
-science-meteorology-dev
added:
- Depends: libspherepack-dev, libhe4-hdfeos-dev, freefoam-dev
+ Depends: libspherepack-dev, libhe4-hdfeos-dev, openturns-wrapper, freefoam-dev
removed:
Depends: libfreefoam-dev, sfftw-dev, libhdfeos-dev, fftw-dev, libsphere-dev
+ Suggests: openturns-examples
* Removed metapackages:
-science-viewing-dev
-science-geometry
diff --git a/dependency_data/debian-science_1.1.json b/dependency_data/debian-science_1.1.json
index b42e482..dc577e8 100644
--- a/dependency_data/debian-science_1.1.json
+++ b/dependency_data/debian-science_1.1.json
@@ -1 +1 @@
-{"neuroscience-cognitive": {"ignore": [], "suggests": ["science-typesetting", "science-psychophysics", "fieldtrip", "eeglab", "debruijn", "freesurfer", "xnat", "pysurfer", "connectomeviewer", "hid"], "depends": ["psignifit", "amide", "dicomnifti", "minc-tools", "medcon", "xmedcon", "nifti-bin", "python-nifti", "fsl", "fslview", "python-mvpa", "caret", "python-pyepl", "praat", "slicer", "dicom3tools", "voxbo", "bioimagesuite", "afni", "mni-autoreg", "mni-n3", "brainvisa", "lipsia", "openmeeg-tools", "mricron", "itksnap", "python-pypsignifit", "python-statsmodels", "spm8", "iqr", "mriconvert", "python-pyxnat"], "recommends": [], "avoid": []}, "economics": {"ignore": [], "suggests": ["ess", "dynare-matlab", "matlab-support", "science-typesetting", "science-viewing", "science-mathematics", "science-numericalcomputation", "science-statistics"], "depends": ["dynare", "gretl", "octave", "octave-econometrics", "octave-statistics", "octave-gsl", "octave-optim", "octave-linear-algebra", "octave-io", "octave-symbolic", "octave-dataframe", "qtoctave", "r-base", "r-cran-urca", "r-cran-bayesm", "r-cran-coda", "r-cran-boot", "r-cran-foreign", "r-cran-kernsmooth", "r-cran-matrix", "r-cran-nlme", "r-cran-hmisc", "r-cran-tseries", "r-cran-mfilter", "r-cran-lme4", "r-cran-mcmcpack", "r-cran-quadprog", "r-cran-fbonds", "r-cran-fimport", "r-cran-fnonlinear", "r-cran-funitroots", "r-cran-wdi", "r-cran-pwt", "rkward", "julia", "maxima", "wxmaxima", "ipython", "python-matplotlib", "python-numpy", "python-scipy", "python-scitools", "python-statsmodels", "python-pandas", "python-simpy", "dolo", "python-econpy"], "recommends": [], "avoid": []}, "financial": {"ignore": [], "suggests": [], "depends": ["r-cran-fasianoptions", "r-cran-fassets", "r-cran-fbasics", "r-cran-fbonds", "r-cran-fcopulae", "r-cran-fexoticoptions", "r-cran-fextremes", "r-cran-fgarch", "r-cran-fimport", "r-cran-fmultivar", "r-cran-fnonlinear", "r-cran-foptions", "r-cran-fregression", "r-cran-ftrading", "r-cran-funitroots", "r-cran-timedate", "r-cran-timeseries", "r-cran-fportfolio"], "recommends": [], "avoid": []}, "robotics": {"ignore": [], "suggests": ["arduino-mk", "ompl-demos", "libcoin60-runtime", "libvtk5.4", "octave", "gnuplot"], "depends": ["rtai", "xenomai-runtime", "libcomedi0", "libopenigtlink1", "morse-simulator", "choreonoid", "liburdfdom-tools", "solid", "robot-player", "d-collide", "rtnet", "orca", "roboop", "orocos-rtt", "orocos-kdl", "orocos-ocl", "orocos-bfl", "ros", "openrtm", "openhrp", "pcl", "gazebo", "openrave"], "recommends": [], "avoid": []}, "robotics-dev": {"ignore": [], "suggests": ["visp-images-data"], "depends": ["libcv-dev", "libroboptim-core-dev", "libvisp-dev", "libcnoid-dev", "libode-dev", "libompl-dev", "libopenigtlink-dev", "liburdfdom-dev", "liburdfdom-headers-dev", "libslicot-dev", "libsdformat-dev", "libconsole-bridge-dev"], "recommends": [], "avoid": []}, "highenergy-physics": {"ignore": [], "suggests": ["paw-demos", "geant321-doc", "lhapdf-pdfsets-minimal", "root-system-doc"], "depends": ["cernlib", "cernlib-base", "cernlib-core", "cernlib-extras", "dzedit", "kuipc", "kxterm", "nypatchy", "pawserv", "zftp", "paw", "paw++", "cernlib-montecarlo", "geant321", "feynmf", "looptools", "python-lhapdf", "octave-lhapdf", "root-macro-fastjet", "pythia8-root-interface", "libroot-bindings-python5.34", "libroot-bindings-ruby5.34", "libroot-graf3d-gl5.34", "libroot-io-xmlparser5.34", "libroot-math-mathmore5.34", "libroot-math-unuran5.34", "libroot-misc-memstat5.34", "libroot-misc-table5.34", "libroot-net-bonjour5.34", "libroot-net-ldap5.34", "libroot-proof-clarens5.34", "libroot-roofit5.34", "libroot-geom5.34", "libroot-graf2d-gpad5.34", "libroot-graf2d-graf5.34", "libroot-graf2d-postscript5.34", "libroot-graf3d-eve5.34", "libroot-graf3d-g3d5.34", "libroot-gui5.34", "libroot-gui-ged5.34", "libroot-hist5.34", "libroot-hist-spectrum5.34", "libroot-html5.34", "libroot-io5.34", "libroot-math-foam5.34", "libroot-math-genvector5.34", "libroot-math-mathcore5.34", "libroot-math-matrix5.34", "libroot-math-minuit5.34", "libroot-math-mlp5.34", "libroot-math-physics5.34", "libroot-math-quadp5.34", "libroot-math-smatrix5.34", "libroot-math-splot5.34", "libroot-misc-minicern5.34", "libroot-montecarlo-eg5.34", "libroot-montecarlo-vmc5.34", "libroot-net5.34", "libroot-net-auth5.34", "libroot-proof5.34", "libroot-proof-proofplayer5.34", "libroot-tmva5.34", "libroot-tree5.34", "libroot-tree-treeplayer5.34", "libroot-core5.34", "root-plugin-graf2d-asimage", "root-plugin-geom-gdml", "root-plugin-gui-qt", "root-plugin-graf2d-qt", "root-plugin-math-fftw3", "root-plugin-math-minuit2", "root-plugin-montecarlo-pythia8", "root-plugin-net-globus", "root-plugin-net-krb5", "root-plugin-proof-peac", "root-plugin-sql-mysql", "root-plugin-sql-odbc", "root-plugin-sql-pgsql", "root-plugin-geom-geombuilder", "root-plugin-geom-geompainter", "root-plugin-graf2d-x11", "root-plugin-graf3d-x3d", "root-plugin-gui-fitpanel", "root-plugin-gui-guibuilder", "root-plugin-gui-sessionviewer", "root-plugin-hist-hbook", "root-plugin-hist-histpainter", "root-plugin-hist-spectrumpainter", "root-plugin-io-sql", "root-plugin-io-xml", "root-plugin-math-fumili", "root-plugin-tree-treeviewer", "root-system-proofd", "root-system-rootd", "root-system-bin", "root-system-common", "root-system", "rivet", "rivet-plugins", "python-rivet", "rivet-root-converter", "thepeg", "thepeg-gui", "herwig++", "geant4"], "recommends": [], "avoid": []}, "engineering": {"ignore": [], "suggests": ["r-cran-spc", "logcentral", "logcentral-tools", "ann-tools", "salome-kernel"], "depends": ["librecad", "sailcut", "oce-draw", "python-silo", "libsilo-bin", "gerris", "gmsh", "getdp", "netgen", "pythoncad", "z88", "freecad", "life-apps", "python-openturns", "code-aster-gui", "code-aster", "metis-edf", "eficas", "code-saturne", "ecs", "hdfview", "syfi-bin", "cba", "python-fiat", "syrthes", "freefoam", "brlcad", "diet-agent", "tetgen", "dime", "avl", "cgns-convert", "pycgns", "varkon", "tochnog", "salome-gui", "salome-jobmanager", "salome-med", "salome-paravis", "salome-smesh", "salome-yacs"], "recommends": [], "avoid": []}, "simulations": {"ignore": [], "suggests": [], "depends": ["sumo", "esys-particle", "lammps", "liggghts", "yade", "python-deap", "freefoam", "getdp", "fdmnes", "radiance"], "recommends": [], "avoid": []}, "neuroscience-datasets": {"ignore": [], "suggests": [], "depends": ["mni-icbm152-nlin-2009", "mni-colin27-nifti", "haxby2001-faceobject", "fsl-harvard-oxford-atlases", "fsl-juelich-histological-atlas", "fsl-jhu-dti-whitematter-atlas", "fsl-mni-structural-atlas", "fsl-talairach-daemon-atlas", "fsl-oxford-thalamic-connectivity-atlas", "fsl-bangor-cerebellar-atlas", "mclaren-rhesus-macaque-atlas", "sri24-atlas"], "recommends": [], "avoid": []}, "viewing-dev": {"ignore": [], "suggests": [], "depends": ["pdl", "gnudatalanguage", "python-scientific", "libgrits-dev", "python-matplotlib", "python-scitools", "libgnuplot-iostream-dev", "libqglviewer-dev", "python-gnuplot", "libcoin80-dev", "libsoqt4-dev", "libvtk5-dev", "libvtk5-qt4-dev", "tcl-vtk", "python-vtk", "libvtk-java", "vtk-examples", "python-pivy", "libgtkdataboxmm-dev", "libgtkdatabox-0.9.2-0-dev", "libeinspline-dev", "inventor-dev", "libqtexengine-dev", "libqwtplot3d-qt4-dev", "python-qwt3d-qt4"], "recommends": [], "avoid": []}, "tools": {"ignore": [], "suggests": ["libmrmpi-dev", "python-mrjob"], "depends": ["pegasus-wms", "openstereogram"], "recommends": [], "avoid": []}, "geography": {"ignore": [], "suggests": ["googleearth-package", "sumo", "grace6"], "depends": ["gis-workstation", "grass", "qgis", "qgis-plugin-grass", "proj-bin", "mapserver-bin", "gmt", "gpsbabel", "gpx2shp", "gpsd", "gpsdrive", "gpsman", "earth3d", "openscenegraph", "thuban", "drawmap", "gpstrans", "geoip-bin", "gpsd-clients", "grass-doc", "php5-mapscript", "phppgadmin", "gpsmanshp", "viking", "avce00", "e00compr", "gdal-bin", "ogdi-bin", "postgis", "postgresql-9.3-postgis-2.1", "osm2pgsql", "josm", "josm-plugins", "merkaartor", "gosmore", "python-mapnik", "mapnik-utils", "osmpbf-bin", "imposm", "hyantesite", "r-cran-sp", "r-cran-maptools", "r-cran-mapdata", "r-cran-mapproj", "r-cran-maps", "pgadmin3", "openjump"], "recommends": [], "avoid": []}, "linguistics": {"ignore": [], "suggests": ["libticcutils2-dev", "frogdata", "libtimbl3-dev", "libtimbl4-dev", "libtimblserver2-dev", "libmbt0-dev", "libucto1-dev", "libfolia-dev", "python-timbl", "wnsqlbuilder"], "depends": ["wordnet", "apertium", "link-grammar", "artha", "sequitur-g2p", "timbl", "timblserver", "mbt", "mbtserver", "ucto", "dimbl", "frog", "collatinus", "travatar"], "recommends": [], "avoid": []}, "dataacquisition": {"ignore": [], "suggests": ["gnudatalanguage", "comedi-source", "rtai", "xenomai-runtime", "linux-image-2.6-rt", "rt-tests", "gpsd", "tango-db", "tango-starter", "tango-accesscontrol", "python-pytango", "python-taurus", "hart"], "depends": ["engauge-digitizer", "qtdmm", "g3data", "ktimetrace", "netcdf-bin", "python-sardana", "jaaa", "ghkl", "narval-utils", "python-visa", "mx-dataacquisition", "epics", "plot-digitizer", "libfreenect-dev", "opendap"], "recommends": [], "avoid": []}, "statistics": {"ignore": [], "suggests": ["r-cran-spc", "science-mathematics", "libtamuanova-dev"], "depends": ["ess", "littler", "r-recommended", "rkward", "r-cran-mapproj", "r-cran-abind", "r-cran-bayesm", "r-cran-boot", "r-cran-cairodevice", "r-cran-car", "r-cran-chron", "r-cran-cluster", "r-cran-coda", "r-cran-codetools", "r-cran-date", "r-cran-dbi", "r-cran-rms", "r-cran-eco", "r-cran-effects", "r-cran-fbasics", "r-cran-fcopulae", "r-cran-fecofin", "r-cran-fextremes", "r-cran-fmultivar", "r-cran-foptions", "r-cran-foreign", "r-cran-fportfolio", "r-cran-timedate", "r-cran-gdata", "r-cran-gmodels", "r-cran-gplots", "r-cran-gregmisc", "r-cran-gtools", "r-cran-hdf5", "r-cran-hmisc", "r-cran-its", "r-cran-kernsmooth", "r-cran-lattice", "r-cran-latticeextra", "r-cran-lhs", "r-cran-lme4", "r-cran-lmtest", "r-cran-mapdata", "r-cran-maps", "r-cran-matchit", "r-cran-matrix", "r-cran-mcmcpack", "r-cran-mgcv", "r-cran-misc3d", "r-cran-mnp", "r-cran-multcomp", "r-cran-mvtnorm", "r-cran-nlme", "r-cran-pscl", "r-cran-psy", "r-cran-qtl", "r-cran-quadprog", "r-cran-rcmdr", "r-cran-relimp", "r-cran-rggobi", "r-cran-rgl", "r-cran-rgtk2", "r-cran-rmpi", "r-cran-rmysql", "r-cran-rodbc", "r-cran-rpart", "r-cran-rpvm", "r-cran-rquantlib", "r-cran-rserve", "r-cran-rsprng", "r-cran-sandwich", "r-cran-sm", "r-cran-snow", "r-cran-strucchange", "r-cran-survival", "r-cran-tkrplot", "r-cran-tseries", "r-cran-vgam", "r-cran-vr", "r-cran-xml", "r-cran-zelig", "r-cran-zoo", "r-cran-msm", "r-cran-amore", "r-cran-teachingdemos", "psignifit", "python-stats", "python-scipy", "r-cran-vcd", "r-cran-permute", "python-statsmodels", "r-cran-spam", "r-cran-spatstat", "r-cran-deldir", "r-cran-fastcluster", "r-cran-statmod", "python-openturns", "python-pandas", "r-cran-acepack", "r-cran-fcalendar"], "recommends": [], "avoid": []}, "imageanalysis": {"ignore": [], "suggests": ["scilab-sivp", "cimg-dev", "libsimage-dev", "libvlfeat-dev", "libvisad-java"], "depends": ["gpivtools", "gpiv", "libcv-dev", "gwyddion", "teem-apps"], "recommends": [], "avoid": []}, "machine-learning": {"ignore": [], "suggests": ["science-statistics", "science-numericalcomputation", "libacovea-dev", "science-typesetting", "ask"], "depends": ["python-pyke", "gprolog", "yap", "libtorch3-dev", "libshogun-dev", "libfann-dev", "libsvm-dev", "libcomplearn-dev", "libqsearch-dev", "liblinear-dev", "libocas-dev", "python-scikits-learn", "python-mdp", "python-mlpy", "weka", "vowpal-wabbit", "r-cran-mass", "r-cran-bayesm", "r-cran-class", "r-cran-cluster", "r-cran-msm", "r-cran-mcmcpack", "r-cran-mnp", "r-cran-amore", "r-cran-gbm", "r-cran-tgp", "python-mvpa", "python-statsmodels", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "autoclass", "mcl", "scilab-ann", "libga-dev", "libevocosm-dev", "pgapack", "python-genetic", "octave-ga", "python-pyevolve", "flann", "lua-torch5", "lush", "libcv-dev", "python-opencv", "libvigraimpex-dev", "python-vigra", "pybrain", "libshark-dev", "python-pebl", "python-orange", "python-pymc"], "recommends": [], "avoid": []}, "mathematics-dev": {"ignore": [], "suggests": ["libtet1.4.2-dev", "libjlapack-java", "libmtj-java", "libnetlib-java", "libitpp-dev", "libnauty-dev", "liblrs-dev", "libqrupdate-dev", "python-openturns", "libopenturns-dev", "openturns-wrapper", "cfortran", "givaro-dev-doc", "givaro-user-doc", "fflas-ffpack-dev-doc", "fflas-ffpack-user-doc", "libcneartree-dev", "libcliquer-dev", "libntl-dev", "libdune-istl-dev", "libdune-localfunctions-dev"], "depends": ["libmesh-dev", "libnglib-dev", "python-numpy", "python-numexpr | python3-numexpr", "libgsl0-dev", "liblapack-dev", "libatlas-base-dev", "libblas-dev", "libopenblas-dev", "libsuperlu3-dev", "libglpk-dev", "python-glpk", "libglpk-java", "libcgal-dev", "libqhull-dev", "libmatheval-dev", "python-openopt", "libmatio-dev", "libblitz0-dev", "libjama-dev", "libtnt-dev", "liblip-dev", "libranlip-dev", "libarpack2-dev", "libarpack++2-dev", "libmei-dev", "libarmadillo-dev", "libstxxl-dev", "libnewmat10-dev", "libmadlib-dev", "libtet1.4-dev", "dolfin-dev", "python-dolfin", "libslepc3.4.2-dev", "petsc-dev", "libtrilinos-dev", "liblife-dev", "libqd-dev", "libcqrlib2-dev", "libcvector2-dev", "libhypre-dev", "libitsol-dev", "libmuparser-dev", "libcneartree3-dev", "libsparskit-dev", "libspooles-dev", "libsuitesparse-dev", "libsuitesparse-metis-dev", "libparmetis-dev", "ufc", "python-ufc", "python-ffc", "python-ufl", "libscythestat-dev", "libfreefem++-dev", "libfreefem-dev", "libgivaro-dev", "fflas-ffpack", "liblevmar-dev", "libpolybori-dev", "libpolybori-groebner-dev", "python-polybori", "libquadrule-dev", "libcdd-dev", "libec-dev", "libgf2x-dev", "libiml-dev", "liblfunction-dev", "libfplll-dev", "liblinbox-dev", "liblrcalc-dev", "libm4ri-dev", "libm4rie-dev", "libratpoints-dev", "libsymmetrica-dev", "libtachyon-dev", "libzn-poly-dev", "libpynac-dev", "gap-dev", "libnfft3-dev", "python-fftw3", "libfftw3-dev", "fftw-dev", "sfftw-dev", "liblbfgs-dev", "libdogleg-dev", "libigraph0-dev", "libalglib-dev", "libeigen3-dev", "libviennacl-dev", "libgnuplot-iostream-dev", "libqcustomplot-dev", "libquadrule-dev", "libmpfrc++-dev", "libscscp1-dev", "python-linop | python3-linop", "libcminpack-dev", "minpack-dev", "libeinspline-dev", "libdune-grid-dev", "libann-dev", "libflann-dev", "libdouble-conversion-dev", "libfeel++-dev", "python-ferari"], "recommends": [], "avoid": []}, "highenergy-physics-dev": {"ignore": [], "suggests": ["clhep-doc", "hepmc-examples", "hepmc-user-manual", "hepmc-reference-manual", "lhapdf-ccwrap-doc", "siscone-examples", "siscone-doc-html", "siscone-doc-pdf", "fastjet-doc", "fastjet-examples", "pythia8-examples", "pythia8-doc-html", "pythia8-doc-worksheet", "rivet-user-manual", "rivet-reference", "rivet-plugins-doc", "thepeg-reference"], "depends": ["cernlib-base-dev", "cernlib-core-dev", "libclhep-dev", "libhepmc-dev", "libhepmcfio-dev", "liblhapdf-dev", "libsiscone-dev", "libsiscone-spherical-dev", "libfastjet-dev", "libfastjettools-dev", "libfastjet-fortran-dev", "libfastjetplugins-dev", "libpythia8-dev", "libhepmcinterface8-dev", "fcc", "libooptools-dev", "libroot-bindings-python-dev", "libroot-bindings-ruby-dev", "libroot-graf3d-gl-dev", "libroot-io-xmlparser-dev", "libroot-math-mathmore-dev", "libroot-math-unuran-dev", "libroot-misc-memstat-dev", "libroot-misc-table-dev", "libroot-net-bonjour-dev", "libroot-net-ldap-dev", "libroot-proof-clarens-dev", "libroot-roofit-dev", "libroot-geom-dev", "libroot-graf2d-gpad-dev", "libroot-graf2d-graf-dev", "libroot-graf2d-postscript-dev", "libroot-graf3d-eve-dev", "libroot-graf3d-g3d-dev", "libroot-gui-dev", "libroot-gui-ged-dev", "libroot-hist-dev", "libroot-hist-spectrum-dev", "libroot-html-dev", "libroot-io-dev", "libroot-math-foam-dev", "libroot-math-genvector-dev", "libroot-math-mathcore-dev", "libroot-math-matrix-dev", "libroot-math-minuit-dev", "libroot-math-mlp-dev", "libroot-math-physics-dev", "libroot-math-quadp-dev", "libroot-math-smatrix-dev", "libroot-math-splot-dev", "libroot-misc-minicern-dev", "libroot-montecarlo-eg-dev", "libroot-montecarlo-vmc-dev", "libroot-net-dev", "libroot-net-auth-dev", "libroot-proof-dev", "libroot-proof-proofplayer-dev", "libroot-tmva-dev", "libroot-tree-dev", "libroot-tree-treeplayer-dev", "libroot-core-dev", "libroot-static", "librivet-dev", "rivet-plugins-dev", "libthepeg-dev", "herwig++-dev"], "recommends": [], "avoid": []}, "mathematics": {"ignore": [], "suggests": ["gap-online-help", "gap-gapdoc", "netgen-doc", "r-cran-evd", "matlab-support", "cliquer", "ann-tools"], "depends": ["axiom", "ginac-tools", "xmaxima", "wxmaxima", "pari-gp", "pari-extra", "gap", "magnus", "gap-small-groups-extra", "gap-trans-groups", "gap-prim-groups", "gap-small-groups", "gap-table-of-marks", "gap-guava", "gap-character-tables", "gap-float", "gerris", "freefem", "freefem3d", "freefem++", "netgen", "gmsh", "getdp", "coq", "proofgeneral", "proofgeneral-coq", "matita", "agda", "prover9", "hol-light", "minisat", "science-statistics", "geomview", "octave", "xmds", "xmds2", "freemat", "mathomatic", "scilab", "scilab-sivp", "scilab-scimax", "scilab-swt", "scilab-ann", "scilab-plotlib", "regina-normal", "snappea", "lp-solve", "libmatheval1", "mumps-test", "nauty", "geogebra", "lrslib", "dolfin-bin", "fenics", "sfc", "python-ffc", "kseg", "polylib-utils", "rheolef", "scotch", "isabelle", "bliss", "life-apps", "python-openturns", "qtoctave", "python-deap", "mcl", "polybori-gui", "polybori", "sagemath-database-conway-polynomials", "sagemath-database-elliptic-curves", "sagemath-database-graphs", "sagemath-database-polytopes", "eclib-tools", "gfan", "lcalc", "fplll-tools", "lrcalc", "palp", "sympow", "tachyon", "julia", "qhull-bin", "octaviz", "sagemath", "eprover", "python-minieigen", "coinor-symphony", "tetgen", "feel++-apps"], "recommends": [], "avoid": []}, "electronics": {"ignore": [], "suggests": ["geda-examples", "geda-doc", "kicad-doc-de", "kicad-doc-en", "kicad-doc-es", "kicad-doc-fr", "kicad-doc-it", "kicad-doc-pt", "kicad-doc-ru", "liblife-dev"], "depends": ["avrdude", "gcc-avr", "gerbv", "qucs", "uisp", "electric", "geda", "kicad", "freehdl", "ghdl", "iverilog", "verilator", "gplcver", "klogic", "gputils", "simulpic", "pcb", "oregano", "tkgate", "texlive-latex-extra", "linsmith", "xsmc-calc", "confluence", "ngspice", "gspiceui", "easyspice", "gnucap", "qelectrotech", "covered", "arduino", "arduino-core", "herb", "visolate", "fritzing", "vbpp", "vbs", "ksimus"], "recommends": [], "avoid": []}, "electrophysiology": {"ignore": [], "suggests": ["science-neuroscience-modeling", "science-dataacquisition", "spike", "klustakwik", "neurodata", "qrtailab", "stimfit", "trellis-neuro", "relacs", "chronus", "libbiosig-dev", "nspike", "rtxi", "bluespike", "meabench", "mclust", "neo", "python-spykeutils", "python-neo", "pymeg", "libxdffileio-dev", "librtfilter-dev", "libeegdev-dev", "libmcpanel-dev", "eegview", "aghermann", "eeglab", "python-neuroshare", "patchclamp", "spykeview"], "depends": ["openelectrophy", "libgdf-dev", "sigviewer", "libdrawtk-dev"], "recommends": [], "avoid": []}, "presentation": {"ignore": [], "suggests": [], "depends": ["latex-beamer", "pdf-presenter-console", "zathura"], "recommends": [], "avoid": []}, "biology": {"ignore": [], "suggests": ["med-bio-dev"], "depends": ["med-bio", "bauble", "genesis", "avida-base", "critterding"], "recommends": [], "avoid": []}, "numericalcomputation": {"ignore": [], "suggests": ["python-sciscipy", "scilab-jims", "scilab-metanet", "libscirenderer-java", "hpcc", "libcneartree-dev", "matlab-support", "libsundials-serial-dev", "octave-sundials", "libquantum-dev"], "depends": ["octave", "python-matplotlib", "python-scipy", "ipython", "python-numpy", "spyder", "python-guiqwt", "pdl", "gnudatalanguage", "scilab", "scilab-sivp", "scilab-scimax", "scilab-swt", "scilab-ann", "scilab-plotlib", "freemat", "yorick", "r-base", "qtoctave", "lush", "yade", "liggghts", "esys-particle", "python-scitools", "python-deap", "python-tables | python3-tables", "vitables", "octavede", "lammps", "julia", "admesh", "metis", "python-gts", "python-demgengeo", "coinor-symphony", "coinor-clp", "metis-edf", "libsuitesparse-dev", "libsuitesparse-metis-dev", "libdune-grid-dev"], "recommends": [], "avoid": []}, "typesetting": {"ignore": [], "suggests": ["tellico", "texmaker", "openoffice.org-dmaths", "r-cran-xtable", "csv2latex", "libgtkmathview-bin", "svgtoipe", "pymarc", "luasseq", "libqtexengine-dev"], "depends": ["referencer", "kbibtex", "impose+", "pybliographer", "texlive-bibtex-extra", "jabref", "bibutils", "biber", "feynmf", "texlive", "texlive-science", "texlive-publishers", "texlive-math-extra", "diploma", "lyx", "texmacs", "texmacs-extra-fonts", "auctex", "xfig", "transfig", "dia", "bibus", "mlpost", "latexdiff", "libjlatexmath-java", "cb2bib", "jeuclid-mathviewer", "sketch", "ipe", "ipe5toxml", "quaneko", "gpapers", "zotero"], "recommends": [], "avoid": []}, "engineering-dev": {"ignore": [], "suggests": ["libgtkdatabox-0.9.2-0-dev", "libgtkdataboxmm-dev", "libqwt-dev | libqwt5-qt4-dev", "libdiet-sed2.8-dev", "libdiet-client2.8-dev", "libdiet-dagda2.8-dev", "libdiet-admin2.8-dev"], "depends": ["libalberta2-dev", "libfvm-dev", "libcgns-dev", "libitpp-dev", "libfreefoam-dev", "libadios-dev", "libbox-dev", "libsilo-dev", "libxdmf-dev", "libgetfem++-dev", "libhdf5-serial-dev", "libjhdf5-java", "libjhdf4-java", "pycgns", "liboce-visualization-dev", "liboce-ocaf-dev", "libdeal.ii-dev", "liblife-dev", "libluminate-dev", "libopenturns-dev", "libmadlib-dev", "libtet1.4-dev", "libslepc3.4.2-dev", "libelmer-dev", "libmed-dev", "libmedc-dev", "libmedimport-dev", "libnetcdf-dev", "python-netcdf", "libnetcdf-java", "syfi-dev", "libmesh-dev", "libnfft3-dev", "libnlopt-dev", "python-fftw3", "libcoin80-dev", "libmetis-edf-dev", "libslicot-dev", "python-collada", "libann-dev", "libflann-dev", "libdime-dev", "libdxflib-dev", "salome-kernel-dev"], "recommends": [], "avoid": []}, "neuroscience-modeling": {"ignore": [], "suggests": ["python-pynn", "moose", "pcsim", "nest", "invt", "xppaut"], "depends": ["python-brian", "cnrun"], "recommends": [], "avoid": []}, "astronomy-dev": {"ignore": [], "suggests": [], "depends": ["libnova-dev", "libworldwind-java", "libccfits-dev", "libcfitsio3-dev", "python-pyfits", "libqfits-dev", "slang-cfitsio", "libastro-fits-cfitsio-perl", "libsofa-c-dev", "libstarlink-pal-dev", "libstarlink-ast-dev", "libwcstools-dev", "wcslib-dev", "libcpl-dev", "python-pywcs", "python-cpl", "python-astropy-legacy", "libgyoto0-dev", "casacore-dev", "liberfa-dev", "libfits-java", "libivoafits-java", "tcl-fitstcl"], "recommends": [], "avoid": []}, "astronomy": {"ignore": ["gstar"], "suggests": ["yorick-cubeview", "yorick-mira", "yorick-spydr", "yorick-yao", "yorick-svipc", "yorick-gyoto", "sunclock", "xtide", "xtide-data", "scilab-celestlab", "scilab-overload", "scilab-scimysql", "cpl-plugin-amber", "cpl-plugin-fors", "cpl-plugin-giraf", "cpl-plugin-hawki", "cpl-plugin-sinfo", "cpl-plugin-kmos", "cpl-plugin-vimos", "cpl-plugin-uves", "cpl-plugin-xsh", "pdl", "pgplot5", "python-scientific", "stars"], "depends": ["gcx", "xorsa", "astronomical-almanac", "lightspeed", "openuniverse", "sextractor", "worldwind", "wcstools", "wcslib-tools", "funtools", "qfits-tools", "gpredict", "predict", "seesat5", "yorick-full", "savi", "stellarium", "xplanet", "xplanet-images", "celestia", "kstars", "starplot", "lynkeos.app", "stardata-common", "gliese", "yale", "boinc-app-milkyway", "boinc-app-seti", "gyoto", "skycat", "ftools-fv", "fitsverify", "fitscheck", "casacore-tools", "iraf", "x11iraf", "python-pyraf", "saods9", "xpa-tools", "python-pywcs", "python-astropy", "python-pyfits", "python3-pyfits", "python-pyds9", "esorex", "python-cpl", "xephem", "orbfit", "linoccult", "midas", "ssystem", "spacechart"], "recommends": [], "avoid": []}, "logic": {"ignore": [], "suggests": [], "depends": ["agda", "coq", "hol-light", "hol88", "matita", "proofgeneral", "depqbf", "picosat", "sat4j", "alt-ergo", "boolector", "cvc3", "prover9", "mace2", "maude", "spass", "coinor-cbc", "minisat+", "clasp", "coala", "gringo", "lbt", "maria", "mona"], "recommends": ["otter"], "avoid": []}, "physics-dev": {"ignore": [], "suggests": ["libtriangle-dev"], "depends": ["libfreefoam-dev", "pyfai", "libnfft3-dev", "python-fftw3", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libopenctm-dev", "python-openctm", "python-quantities"], "recommends": [], "avoid": []}, "chemistry": {"ignore": [], "suggests": ["gdpc-examples", "python-mzml-doc"], "depends": ["apbs", "bkchem", "bodr", "libcdk-java", "chemeq", "chemical-mime-data", "chemtool", "easychem", "gabedit", "galculator", "garlic", "gausssum", "gchempaint", "gdis", "ghemical", "gcrystal", "gcu-bin", "gcu-plugin", "gperiodic", "gromacs | gromacs-lam | gromacs-mpich | gromacs-openmpi", "kalzium", "katomic", "mopac7-bin", "mpqc", "mpqc-support", "openbabel", "python-openbabel", "psi3", "pymol", "viewmol", "xdrawchem", "xmakemol-gl | xmakemol", "v-sim", "rasmol", "adun.app", "gdpc", "xbs", "gelemental", "avogadro", "gamgi", "massxpert", "drawxtl", "chemical-structures", "freefoam", "pyfai", "python-mmtk", "libegad", "libint", "molden", "molekel", "tinker", "jmol", "qutemol", "cp2k", "pdb2pqr", "mmass", "mmass-modules", "python-mzml", "tandem-mass", "openchrom", "fdmnes"], "recommends": [], "avoid": []}, "dataacquisition-dev": {"ignore": [], "suggests": [], "depends": ["libnarval1-dev", "libtango8-dev", "liblog4tango5-dev"], "recommends": [], "avoid": []}, "bci": {"ignore": [], "suggests": ["pyff", "pybci", "bcpy2000", "bci2000", "emokit", "openvibe"], "depends": [], "recommends": [], "avoid": []}, "nanoscale-physics-dev": {"ignore": [], "suggests": ["libfftw3-doc", "liblife-dev", "oce-draw", "python-netcdf"], "depends": ["abinit-doc", "libblas-dev", "libblas-doc", "liblapack-dev", "liblapack-doc", "libetsf-io-dev", "libetsf-io-doc", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libgsl0-dev", "gsl-bin", "gsl-doc-info", "gsl-ref-html | gsl-ref-psdoc", "libnetcdf-dev", "netcdf-doc", "libtrilinos-dev", "libtrilinos-doc", "libxc-dev", "wannier90-dev", "liboce-visualization-dev", "liboce-ocaf-dev", "libfox95", "libnbc", "libpspio", "libxc", "spglib", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "python-fabio", "libcbf-dev", "pyfai"], "recommends": ["gsl-doc-pdf", "libblacs-mpi-dev", "libscalapack-mpi-dev", "scalapack-doc", "science-mathematics-dev"], "avoid": []}, "geometry": {"ignore": [], "suggests": ["libcgal-dev", "libgeometry-primitive-perl", "libmath-geometry-voronoi-perl", "octave-geometry"], "depends": ["carmetal", "salome-geom", "drgeo", "geogebra-kde"], "recommends": [], "avoid": []}, "physics": {"ignore": [], "suggests": ["paw-demos", "science-statistics", "science-mathematics", "scilab-sivp", "openctm-tools", "life-apps", "liblife-dev"], "depends": ["cernlib", "geant321", "paw++", "paw", "clhep", "geant4", "abinit | mpqc | openmx | psi3", "gerris", "feynmf", "freefoam", "fityk", "horae", "ifeffit", "sixpack", "tessa | tessa-mpi", "science-numericalcomputation", "oce-draw", "science-electronics", "v-sim", "gpiv", "gpivtools", "maxima", "python-sympy", "axiom", "meshlab", "cadabra", "drawxtl", "opticalraytracer", "ghkl", "python-deap", "etsf-io", "pymca", "quantum-espresso", "gwyddion", "blzpack", "gate", "openfoam", "jfreemesh", "spis", "espresso++", "cp2k", "octaviz", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "fdmnes"], "recommends": [], "avoid": []}, "meteorology": {"ignore": [], "suggests": ["paraview", "gnudatalanguage", "r-base", "octave-octcdf", "gerris", "python-openturns", "python-dap"], "depends": ["cdo", "nco", "dballe", "zygrib", "ncview", "grads", "ferret-vis", "magics++", "freefoam", "visit", "libgrib-api-tools", "ecaccess", "geonetwork", "ncl", "python-netcdf", "python-grib", "python-drslib", "python-cmor", "python-sphere", "cmip5-cmor-tables", "aweather", "libdap-bin", "libdap-doc", "vistrails"], "recommends": [], "avoid": []}, "viewing": {"ignore": [], "suggests": ["libgrits-dev", "worldwind", "med-imaging", "libgtkmathview-bin", "jeuclid-mathviewer", "texlive-pictures", "pgplot5", "r-cran-plotrix", "r-cran-colorspace", "r-cran-labeling", "r-cran-scales", "r-cran-ggplot2", "r-cran-aplpack", "findimagedupes", "libpuzzle-bin", "python-matplotlib", "python-scitools", "circos", "circos-tools", "libqglviewer-dev", "libcoin80-dev", "libsoqt4-dev", "libvtk5-dev", "libvtk5-qt4-dev", "tcl-vtk", "python-vtk", "libvtk-java", "vtk-examples", "python-pivy"], "depends": ["vistrails", "pdl", "gnudatalanguage", "kst", "ifrit", "yorick", "python-scientific", "fityk", "gnuplot", "grace", "gri", "labplot", "graphviz", "pyxplot", "plotdrop", "qtiplot", "python-guiqwt", "imview", "mayavi2", "g3data", "gwyddion", "paraview", "visit", "gle-graphics", "gmsh", "lybniz", "3depict", "mathgl", "udav", "python-viper", "matlab2tikz", "cassandra", "pgfplots", "feedgnuplot", "libgnuplot-iostream-dev", "libqglviewer2", "python-gnuplot", "ovito", "scidavis"], "recommends": [], "avoid": []}, "devices": {"ignore": [], "suggests": ["libticables-dev", "libticalcs-dev", "libticonv-dev", "libtifiles-dev"], "depends": ["expeyes", "gfm", "tiemu", "tilem", "tilp2", "bossa", "bossa-cli"], "recommends": [], "avoid": []}, "nanoscale-physics": {"ignore": [], "suggests": ["dx", "dx-doc", "gmsh", "gpiv", "gpivtools", "life-apps", "qtiplot", "scidavis", "science-statistics", "science-mathematics", "scilab-sivp"], "depends": ["abinit", "mpqc", "openmx", "psi3", "quantum-espresso", "drawxtl", "etsf-io", "feynmf", "fityk", "gnuplot", "grace", "horae", "ifeffit", "sixpack", "libblas3gf", "liblapack3gf", "libfftw3-3", "libgsl0ldbl", "gsl-bin", "netcdf-bin", "netcdf-doc", "nco", "ncview", "libopenmpi1.3 | libmpich2-1.2 | libmpich1.0gf", "openmpi-bin | mpich2 | mpich-bin", "openmpi-doc | mpich2-doc | mpi-doc", "science-numericalcomputation", "avogadro", "garlic", "gdis", "ghemical", "v-sim", "gwyddion", "ape", "atompaw", "bigdft", "cp2k", "espresso++", "exciting", "gpaw", "octopus", "pymca", "python-ase", "wannier90", "qtoctave", "octaviz", "fdmnes", "cbflib-bin"], "recommends": ["axiom", "maxima", "cadabra", "extrema", "ggobi", "mayavi2", "udav", "gperiodic", "python-elemental", "graphviz", "libblacs-mpi1", "libscalapack-mpi1", "python-scientific", "python-scipy", "python-scitools", "python-sympy", "pyxplot"], "avoid": []}, "social": {"ignore": [], "suggests": [], "depends": ["opensesame"], "recommends": [], "avoid": []}, "distributedcomputing": {"ignore": [], "suggests": ["hpcc", "coop-computing-tools", "python-mpi4py", "psom", "octave-mpi"], "depends": ["ipython", "torque-common", "torque-server", "nordugrid-arc-nox", "gridengine-client", "gridengine-exec", "gridengine-master", "gridengine-qmon", "globus-core", "openmpi-bin", "mpich2", "mpich", "openmpipython", "mpich2python", "python-mpi", "condor", "dmtcp", "environment-modules"], "recommends": [], "avoid": []}, "psychophysics": {"ignore": [], "suggests": ["science-neuroscience-cognitive", "science-bci", "visionegg", "python-pyxid", "tscope", "opensesame", "psytoolkit", "debruijn", "psychlops", "pebl"], "depends": ["psychopy", "python-pyoptical", "python-pyepl", "libfreenect-dev", "nrec"], "recommends": ["octave-psychtoolbox-3"], "avoid": []}, "meteorology-dev": {"ignore": [], "suggests": ["gfortran", "ksh", "pkg-config", "liblife-dev"], "depends": ["libemos-dev", "libgadap-dev", "libcmor-dev", "libgrib-api-dev", "libgrib-api-tools", "libgrib2c-dev", "libhe5-hdfeos-dev", "libhdfeos-dev", "libproj-dev", "libgctp-dev", "libnetcdf-dev", "netcdf-bin", "liblapack-dev", "libblas-dev", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libblas-doc", "liblapack-doc", "libfftw3-doc", "liblas-dev", "libsphere-dev", "libterralib-dev", "liboasis3-dev", "libudunits2-dev", "libdap-dev", "python-openturns", "libopenturns-dev", "openturns-wrapper", "wcslib-dev", "wcslib-doc", "libfreefoam-dev", "librsl-dev"], "recommends": [], "avoid": []}}
\ No newline at end of file
+{"neuroscience-cognitive": {"ignore": [], "suggests": ["science-typesetting", "science-psychophysics", "fieldtrip", "eeglab", "debruijn", "freesurfer", "xnat", "pysurfer", "connectomeviewer", "hid"], "depends": ["psignifit", "amide", "dicomnifti", "minc-tools", "medcon", "xmedcon", "nifti-bin", "python-nifti", "fsl", "fslview", "python-mvpa", "caret", "python-pyepl", "praat", "slicer", "dicom3tools", "voxbo", "bioimagesuite", "afni", "mni-autoreg", "mni-n3", "brainvisa", "lipsia", "openmeeg-tools", "mricron", "itksnap", "python-pypsignifit", "python-statsmodels", "spm8", "iqr", "mriconvert", "python-pyxnat"], "recommends": [], "avoid": []}, "economics": {"ignore": [], "suggests": ["ess", "dynare-matlab", "matlab-support", "science-typesetting", "science-viewing", "science-mathematics", "science-numericalcomputation", "science-statistics"], "depends": ["dynare", "gretl", "octave", "octave-econometrics", "octave-statistics", "octave-gsl", "octave-optim", "octave-linear-algebra", "octave-io", "octave-symbolic", "octave-dataframe", "qtoctave", "r-base", "r-cran-urca", "r-cran-bayesm", "r-cran-coda", "r-cran-boot", "r-cran-foreign", "r-cran-kernsmooth", "r-cran-matrix", "r-cran-nlme", "r-cran-hmisc", "r-cran-tseries", "r-cran-mfilter", "r-cran-lme4", "r-cran-mcmcpack", "r-cran-quadprog", "r-cran-fbonds", "r-cran-fimport", "r-cran-fnonlinear", "r-cran-funitroots", "r-cran-wdi", "r-cran-pwt", "rkward", "julia", "maxima", "wxmaxima", "ipython", "python-matplotlib", "python-numpy", "python-scipy", "python-scitools", "python-statsmodels", "python-pandas", "python-simpy", "dolo", "python-econpy"], "recommends": [], "avoid": []}, "financial": {"ignore": [], "suggests": [], "depends": ["r-cran-fasianoptions", "r-cran-fassets", "r-cran-fbasics", "r-cran-fbonds", "r-cran-fcopulae", "r-cran-fexoticoptions", "r-cran-fextremes", "r-cran-fgarch", "r-cran-fimport", "r-cran-fmultivar", "r-cran-fnonlinear", "r-cran-foptions", "r-cran-fregression", "r-cran-ftrading", "r-cran-funitroots", "r-cran-timedate", "r-cran-timeseries", "r-cran-fportfolio"], "recommends": [], "avoid": []}, "robotics": {"ignore": [], "suggests": ["arduino-mk", "ompl-demos", "libcoin60-runtime", "libvtk5.4", "octave", "gnuplot"], "depends": ["rtai", "xenomai-runtime", "morse-simulator", "choreonoid", "liburdfdom-tools", "solid", "robot-player", "d-collide", "rtnet", "orca", "roboop", "orocos-rtt", "orocos-kdl", "orocos-ocl", "orocos-bfl", "ros", "openrtm", "openhrp", "pcl", "gazebo", "openrave"], "recommends": [], "avoid": []}, "robotics-dev": {"ignore": [], "suggests": ["visp-images-data"], "depends": ["libcv-dev", "libroboptim-core-dev", "libvisp-dev", "libcnoid-dev", "libode-dev", "libompl-dev", "libopenigtlink-dev", "liburdfdom-dev", "liburdfdom-headers-dev", "libslicot-dev", "libsdformat-dev", "libconsole-bridge-dev", "libcomedi-dev", "python-comedilib"], "recommends": [], "avoid": []}, "highenergy-physics": {"ignore": [], "suggests": ["paw-demos", "geant321-doc", "lhapdf-pdfsets-minimal", "root-system-doc"], "depends": ["cernlib", "cernlib-base", "cernlib-core", "cernlib-extras", "dzedit", "kuipc", "kxterm", "nypatchy", "pawserv", "zftp", "paw", "paw++", "cernlib-montecarlo", "geant321", "feynmf", "looptools", "python-lhapdf", "octave-lhapdf", "root-macro-fastjet", "pythia8-root-interface", "libroot-bindings-python5.34", "libroot-bindings-ruby5.34", "libroot-graf3d-gl5.34", "libroot-io-xmlparser5.34", "libroot-math-mathmore5.34", "libroot-math-unuran5.34", "libroot-misc-memstat5.34", "libroot-misc-table5.34", "libroot-net-bonjour5.34", "libroot-net-ldap5.34", "libroot-proof-clarens5.34", "libroot-roofit5.34", "libroot-geom5.34", "libroot-graf2d-gpad5.34", "libroot-graf2d-graf5.34", "libroot-graf2d-postscript5.34", "libroot-graf3d-eve5.34", "libroot-graf3d-g3d5.34", "libroot-gui5.34", "libroot-gui-ged5.34", "libroot-hist5.34", "libroot-hist-spectrum5.34", "libroot-html5.34", "libroot-io5.34", "libroot-math-foam5.34", "libroot-math-genvector5.34", "libroot-math-mathcore5.34", "libroot-math-matrix5.34", "libroot-math-minuit5.34", "libroot-math-mlp5.34", "libroot-math-physics5.34", "libroot-math-quadp5.34", "libroot-math-smatrix5.34", "libroot-math-splot5.34", "libroot-misc-minicern5.34", "libroot-montecarlo-eg5.34", "libroot-montecarlo-vmc5.34", "libroot-net5.34", "libroot-net-auth5.34", "libroot-proof5.34", "libroot-proof-proofplayer5.34", "libroot-tmva5.34", "libroot-tree5.34", "libroot-tree-treeplayer5.34", "libroot-core5.34", "root-plugin-graf2d-asimage", "root-plugin-geom-gdml", "root-plugin-gui-qt", "root-plugin-graf2d-qt", "root-plugin-math-fftw3", "root-plugin-math-minuit2", "root-plugin-montecarlo-pythia8", "root-plugin-net-globus", "root-plugin-net-krb5", "root-plugin-proof-peac", "root-plugin-sql-mysql", "root-plugin-sql-odbc", "root-plugin-sql-pgsql", "root-plugin-geom-geombuilder", "root-plugin-geom-geompainter", "root-plugin-graf2d-x11", "root-plugin-graf3d-x3d", "root-plugin-gui-fitpanel", "root-plugin-gui-guibuilder", "root-plugin-gui-sessionviewer", "root-plugin-hist-hbook", "root-plugin-hist-histpainter", "root-plugin-hist-spectrumpainter", "root-plugin-io-sql", "root-plugin-io-xml", "root-plugin-math-fumili", "root-plugin-tree-treeviewer", "root-system-proofd", "root-system-rootd", "root-system-bin", "root-system-common", "root-system", "rivet", "rivet-plugins", "python-rivet", "rivet-root-converter", "thepeg", "thepeg-gui", "herwig++", "geant4"], "recommends": [], "avoid": []}, "engineering": {"ignore": [], "suggests": ["r-cran-spc", "logcentral", "logcentral-tools", "ann-tools", "salome-kernel"], "depends": ["librecad", "sailcut", "oce-draw", "python-silo", "libsilo-bin", "gerris", "gmsh", "getdp", "netgen", "pythoncad", "z88", "freecad", "life-apps", "python-openturns", "code-aster-gui", "code-aster", "metis-edf", "eficas", "code-saturne", "ecs", "hdfview", "syfi-bin", "cba", "python-fiat", "syrthes", "freefoam", "brlcad", "diet-agent", "tetgen", "dime", "avl", "cgns-convert", "pycgns", "varkon", "tochnog", "salome-gui", "salome-jobmanager", "salome-med", "salome-paravis", "salome-smesh", "salome-yacs"], "recommends": [], "avoid": []}, "simulations": {"ignore": [], "suggests": [], "depends": ["sumo", "esys-particle", "lammps", "liggghts", "yade", "python-deap", "freefoam", "getdp", "fdmnes", "radiance"], "recommends": [], "avoid": []}, "neuroscience-datasets": {"ignore": [], "suggests": [], "depends": ["mni-icbm152-nlin-2009", "mni-colin27-nifti", "haxby2001-faceobject", "fsl-harvard-oxford-atlases", "fsl-juelich-histological-atlas", "fsl-jhu-dti-whitematter-atlas", "fsl-mni-structural-atlas", "fsl-talairach-daemon-atlas", "fsl-oxford-thalamic-connectivity-atlas", "fsl-bangor-cerebellar-atlas", "mclaren-rhesus-macaque-atlas", "sri24-atlas"], "recommends": [], "avoid": []}, "viewing-dev": {"ignore": [], "suggests": [], "depends": ["pdl", "gnudatalanguage", "python-scientific", "libgrits-dev", "python-matplotlib", "python-scitools", "libgnuplot-iostream-dev", "libqglviewer-dev", "python-gnuplot", "libcoin80-dev", "libsoqt4-dev", "libvtk5-dev", "libvtk5-qt4-dev", "tcl-vtk", "python-vtk", "libvtk-java", "vtk-examples", "python-pivy", "libgtkdataboxmm-dev", "libgtkdatabox-0.9.2-0-dev", "libeinspline-dev", "inventor-dev", "libqtexengine-dev", "libqwtplot3d-qt4-dev", "python-qwt3d-qt4"], "recommends": [], "avoid": []}, "tools": {"ignore": [], "suggests": ["libmrmpi-dev", "python-mrjob"], "depends": ["pegasus-wms", "openstereogram", "xoscope"], "recommends": [], "avoid": []}, "geography": {"ignore": [], "suggests": ["googleearth-package", "sumo", "grace6"], "depends": ["gis-workstation", "grass", "qgis", "qgis-plugin-grass", "proj-bin", "mapserver-bin", "gmt", "gpsbabel", "gpx2shp", "gpsd", "gpsdrive", "gpsman", "earth3d", "openscenegraph", "thuban", "drawmap", "gpstrans", "geoip-bin", "gpsd-clients", "grass-doc", "php5-mapscript", "phppgadmin", "gpsmanshp", "viking", "avce00", "e00compr", "gdal-bin", "ogdi-bin", "postgis", "postgresql-9.3-postgis-2.1", "osm2pgsql", "josm", "josm-plugins", "merkaartor", "gosmore", "python-mapnik", "mapnik-utils", "osmpbf-bin", "imposm", "hyantesite", "r-cran-sp", "r-cran-maptools", "r-cran-mapdata", "r-cran-mapproj", "r-cran-maps", "pgadmin3", "openjump"], "recommends": [], "avoid": []}, "linguistics": {"ignore": [], "suggests": ["libticcutils2-dev", "frogdata", "libtimbl3-dev", "libtimbl4-dev", "libtimblserver2-dev", "libmbt0-dev", "libucto1-dev", "libfolia-dev", "python-timbl", "wnsqlbuilder"], "depends": ["wordnet", "apertium", "link-grammar", "artha", "sequitur-g2p", "timbl", "timblserver", "mbt", "mbtserver", "ucto", "dimbl", "frog", "collatinus", "travatar"], "recommends": [], "avoid": []}, "dataacquisition": {"ignore": [], "suggests": ["gnudatalanguage", "comedi-source", "rtai", "xenomai-runtime", "linux-image-2.6-rt", "rt-tests", "gpsd", "tango-db", "tango-starter", "tango-accesscontrol", "python-pytango", "python-taurus", "hart"], "depends": ["engauge-digitizer", "qtdmm", "g3data", "ktimetrace", "netcdf-bin", "python-sardana", "jaaa", "ghkl", "narval-utils", "python-visa", "mx-dataacquisition", "epics", "plot-digitizer", "libfreenect-dev", "opendap"], "recommends": [], "avoid": []}, "statistics": {"ignore": [], "suggests": ["r-cran-spc", "science-mathematics", "libtamuanova-dev"], "depends": ["ess", "littler", "r-recommended", "rkward", "r-cran-mapproj", "r-cran-abind", "r-cran-bayesm", "r-cran-boot", "r-cran-cairodevice", "r-cran-car", "r-cran-chron", "r-cran-cluster", "r-cran-coda", "r-cran-codetools", "r-cran-date", "r-cran-dbi", "r-cran-rms", "r-cran-eco", "r-cran-effects", "r-cran-fbasics", "r-cran-fcopulae", "r-cran-fecofin", "r-cran-fextremes", "r-cran-fmultivar", "r-cran-foptions", "r-cran-foreign", "r-cran-fportfolio", "r-cran-timedate", "r-cran-gdata", "r-cran-gmodels", "r-cran-gplots", "r-cran-gregmisc", "r-cran-gtools", "r-cran-hdf5", "r-cran-hmisc", "r-cran-its", "r-cran-kernsmooth", "r-cran-lattice", "r-cran-latticeextra", "r-cran-lhs", "r-cran-lme4", "r-cran-lmtest", "r-cran-mapdata", "r-cran-maps", "r-cran-matchit", "r-cran-matrix", "r-cran-mcmcpack", "r-cran-mgcv", "r-cran-misc3d", "r-cran-mnp", "r-cran-multcomp", "r-cran-mvtnorm", "r-cran-nlme", "r-cran-pscl", "r-cran-psy", "r-cran-qtl", "r-cran-quadprog", "r-cran-rcmdr", "r-cran-relimp", "r-cran-rggobi", "r-cran-rgl", "r-cran-rgtk2", "r-cran-rmpi", "r-cran-rmysql", "r-cran-rodbc", "r-cran-rpart", "r-cran-rpvm", "r-cran-rquantlib", "r-cran-rserve", "r-cran-rsprng", "r-cran-sandwich", "r-cran-sm", "r-cran-snow", "r-cran-strucchange", "r-cran-survival", "r-cran-tkrplot", "r-cran-tseries", "r-cran-vgam", "r-cran-mass", "r-cran-xml", "r-cran-zelig", "r-cran-zoo", "r-cran-msm", "r-cran-amore", "r-cran-teachingdemos", "psignifit", "python-stats", "python-scipy", "r-cran-vcd", "r-cran-permute", "python-statsmodels", "r-cran-spam", "r-cran-spatstat", "r-cran-deldir", "r-cran-fastcluster", "r-cran-statmod", "python-openturns", "python-pandas", "r-cran-acepack", "r-cran-fcalendar"], "recommends": [], "avoid": []}, "imageanalysis": {"ignore": [], "suggests": ["scilab-sivp", "cimg-dev", "libsimage-dev", "libvlfeat-dev", "libvisad-java"], "depends": ["gpivtools", "gpiv", "libcv-dev", "gwyddion", "teem-apps"], "recommends": [], "avoid": []}, "machine-learning": {"ignore": [], "suggests": ["science-statistics", "science-numericalcomputation", "libacovea-dev", "science-typesetting", "ask"], "depends": ["python-pyke", "gprolog", "yap", "libtorch3-dev", "libshogun-dev", "libfann-dev", "libsvm-dev", "libcomplearn-dev", "libqsearch-dev", "liblinear-dev", "libocas-dev", "python-scikits-learn", "python-mdp", "python-mlpy", "weka", "vowpal-wabbit", "r-cran-mass", "r-cran-bayesm", "r-cran-class", "r-cran-cluster", "r-cran-msm", "r-cran-mcmcpack", "r-cran-mnp", "r-cran-amore", "r-cran-gbm", "r-cran-tgp", "python-mvpa", "python-statsmodels", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "autoclass", "mcl", "scilab-ann", "libga-dev", "libevocosm-dev", "pgapack", "python-genetic", "octave-ga", "python-pyevolve", "flann", "lua-torch5", "lush", "libcv-dev", "python-opencv", "libvigraimpex-dev", "python-vigra", "pybrain", "libshark-dev", "python-pebl", "python-orange", "python-pymc"], "recommends": [], "avoid": []}, "mathematics-dev": {"ignore": [], "suggests": ["libtet1.4.2-dev", "libjlapack-java", "libmtj-java", "libnetlib-java", "libitpp-dev", "libnauty-dev", "liblrs-dev", "libqrupdate-dev", "openturns-examples", "cfortran", "givaro-dev-doc", "givaro-user-doc", "fflas-ffpack-dev-doc", "fflas-ffpack-user-doc", "libcliquer-dev", "libntl-dev", "libdune-istl-dev", "libdune-localfunctions-dev"], "depends": ["libmesh-dev", "libnglib-dev", "python-numpy", "python-numexpr | python3-numexpr", "libgsl0-dev", "liblapack-dev", "libatlas-base-dev", "libblas-dev", "libopenblas-dev", "libsuperlu3-dev", "libglpk-dev", "python-glpk", "libglpk-java", "libcgal-dev", "libqhull-dev", "libmatheval-dev", "python-openopt", "libmatio-dev", "libblitz0-dev", "libjama-dev", "libtnt-dev", "liblip-dev", "libranlip-dev", "libarpack2-dev", "libarpack++2-dev", "code-saturne-bin", "code-saturne-include", "libarmadillo-dev", "libstxxl-dev", "libnewmat10-dev", "libmadlib-dev", "libtet1.4-dev", "dolfin-dev", "python-dolfin", "libslepc3.4.2-dev", "petsc-dev", "libtrilinos-dev", "liblife-dev", "python-openturns", "libopenturns-dev", "libqd-dev", "libcqrlib2-dev", "libcvector2-dev", "libhypre-dev", "libitsol-dev", "libmuparser-dev", "libsparskit-dev", "libspooles-dev", "libsuitesparse-dev", "libsuitesparse-metis-dev", "libparmetis-dev", "ufc", "python-ufc", "python-ffc", "python-ufl", "libscythestat-dev", "libfreefem++-dev", "libfreefem-dev", "libgivaro-dev", "fflas-ffpack", "liblevmar-dev", "libpolybori-dev", "libpolybori-groebner-dev", "python-polybori", "libquadrule-dev", "libcdd-dev", "libec-dev", "libgf2x-dev", "libiml-dev", "liblfunction-dev", "libfplll-dev", "liblinbox-dev", "liblrcalc-dev", "libm4ri-dev", "libm4rie-dev", "libratpoints-dev", "libsymmetrica-dev", "libtachyon-dev", "libzn-poly-dev", "libpynac-dev", "gap-dev", "libnfft3-dev", "python-fftw3", "libfftw3-dev", "fftw-dev", "sfftw-dev", "liblbfgs-dev", "libdogleg-dev", "libigraph0-dev", "libalglib-dev", "libeigen3-dev", "libviennacl-dev", "libgnuplot-iostream-dev", "libqcustomplot-dev", "libquadrule-dev", "libcneartree-dev", "libmpfrc++-dev", "libscscp1-dev", "python-linop | python3-linop", "libcminpack-dev", "minpack-dev", "libeinspline-dev", "libdune-grid-dev", "libann-dev", "libflann-dev", "libdouble-conversion-dev", "libfeel++-dev", "python-ferari"], "recommends": [], "avoid": []}, "highenergy-physics-dev": {"ignore": [], "suggests": ["clhep-doc", "hepmc-examples", "hepmc-user-manual", "hepmc-reference-manual", "lhapdf-ccwrap-doc", "siscone-examples", "siscone-doc-html", "siscone-doc-pdf", "fastjet-doc", "fastjet-examples", "pythia8-examples", "pythia8-doc-html", "pythia8-doc-worksheet", "rivet-user-manual", "rivet-reference", "rivet-plugins-doc", "thepeg-reference"], "depends": ["cernlib-base-dev", "cernlib-core-dev", "libclhep-dev", "libhepmc-dev", "libhepmcfio-dev", "liblhapdf-dev", "libsiscone-dev", "libsiscone-spherical-dev", "libfastjet-dev", "libfastjettools-dev", "libfastjet-fortran-dev", "libfastjetplugins-dev", "libpythia8-dev", "libhepmcinterface8-dev", "fcc", "libooptools-dev", "libroot-bindings-python-dev", "libroot-bindings-ruby-dev", "libroot-graf3d-gl-dev", "libroot-io-xmlparser-dev", "libroot-math-mathmore-dev", "libroot-math-unuran-dev", "libroot-misc-memstat-dev", "libroot-misc-table-dev", "libroot-net-bonjour-dev", "libroot-net-ldap-dev", "libroot-proof-clarens-dev", "libroot-roofit-dev", "libroot-geom-dev", "libroot-graf2d-gpad-dev", "libroot-graf2d-graf-dev", "libroot-graf2d-postscript-dev", "libroot-graf3d-eve-dev", "libroot-graf3d-g3d-dev", "libroot-gui-dev", "libroot-gui-ged-dev", "libroot-hist-dev", "libroot-hist-spectrum-dev", "libroot-html-dev", "libroot-io-dev", "libroot-math-foam-dev", "libroot-math-genvector-dev", "libroot-math-mathcore-dev", "libroot-math-matrix-dev", "libroot-math-minuit-dev", "libroot-math-mlp-dev", "libroot-math-physics-dev", "libroot-math-quadp-dev", "libroot-math-smatrix-dev", "libroot-math-splot-dev", "libroot-misc-minicern-dev", "libroot-montecarlo-eg-dev", "libroot-montecarlo-vmc-dev", "libroot-net-dev", "libroot-net-auth-dev", "libroot-proof-dev", "libroot-proof-proofplayer-dev", "libroot-tmva-dev", "libroot-tree-dev", "libroot-tree-treeplayer-dev", "libroot-core-dev", "libroot-static", "librivet-dev", "rivet-plugins-dev", "libthepeg-dev", "herwig++-dev"], "recommends": [], "avoid": []}, "mathematics": {"ignore": [], "suggests": ["gap-online-help", "gap-gapdoc", "netgen-doc", "r-cran-evd", "matlab-support", "cliquer", "ann-tools"], "depends": ["axiom", "ginac-tools", "xmaxima", "wxmaxima", "pari-gp", "pari-extra", "gap", "magnus", "gap-small-groups-extra", "gap-trans-groups", "gap-prim-groups", "gap-small-groups", "gap-table-of-marks", "gap-guava", "gap-character-tables", "gap-float", "gerris", "freefem", "freefem3d", "freefem++", "netgen", "gmsh", "getdp", "coq", "proofgeneral", "proofgeneral-coq", "matita", "agda", "prover9", "hol-light", "minisat", "science-statistics", "geomview", "octave", "xmds", "xmds2", "freemat", "mathomatic", "scilab", "scilab-sivp", "scilab-scimax", "scilab-swt", "scilab-ann", "scilab-plotlib", "regina-normal", "snappea", "lp-solve", "libmatheval1", "mumps-test", "nauty", "geogebra", "lrslib", "dolfin-bin", "fenics", "sfc", "python-ffc", "kseg", "polylib-utils", "rheolef", "scotch", "isabelle", "bliss", "life-apps", "python-openturns", "qtoctave", "python-deap", "mcl", "polybori-gui", "polybori", "sagemath-database-conway-polynomials", "sagemath-database-elliptic-curves", "sagemath-database-graphs", "sagemath-database-polytopes", "eclib-tools", "gfan", "lcalc", "fplll-tools", "lrcalc", "palp", "sympow", "tachyon", "julia", "qhull-bin", "octaviz", "sagemath", "eprover", "python-minieigen", "coinor-symphony", "tetgen", "feel++-apps"], "recommends": [], "avoid": []}, "electronics": {"ignore": [], "suggests": ["geda-examples", "geda-doc", "kicad-doc-de", "kicad-doc-en", "kicad-doc-es", "kicad-doc-fr", "kicad-doc-it", "kicad-doc-pt", "kicad-doc-ru", "liblife-dev"], "depends": ["avrdude", "gcc-avr", "gerbv", "qucs", "uisp", "electric", "geda", "kicad", "freehdl", "ghdl", "iverilog", "verilator", "gplcver", "klogic", "gputils", "simulpic", "pcb", "oregano", "tkgate", "texlive-latex-extra", "linsmith", "xsmc-calc", "confluence", "ngspice", "gspiceui", "easyspice", "gnucap", "qelectrotech", "covered", "arduino", "arduino-core", "herb", "visolate", "fritzing", "vbpp", "vbs", "ksimus"], "recommends": [], "avoid": []}, "electrophysiology": {"ignore": [], "suggests": ["science-neuroscience-modeling", "science-dataacquisition", "spike", "klustakwik", "neurodata", "qrtailab", "stimfit", "trellis-neuro", "relacs", "chronus", "libbiosig-dev", "nspike", "rtxi", "bluespike", "meabench", "mclust", "neo", "python-spykeutils", "python-neo", "pymeg", "libxdffileio-dev", "librtfilter-dev", "libeegdev-dev", "libmcpanel-dev", "eegview", "aghermann", "eeglab", "python-neuroshare", "patchclamp", "spykeview"], "depends": ["openelectrophy", "libgdf-dev", "sigviewer", "libdrawtk-dev"], "recommends": [], "avoid": []}, "presentation": {"ignore": [], "suggests": [], "depends": ["latex-beamer", "pdf-presenter-console", "zathura"], "recommends": [], "avoid": []}, "biology": {"ignore": [], "suggests": ["med-bio-dev"], "depends": ["med-bio", "bauble", "genesis", "avida-base", "critterding"], "recommends": [], "avoid": []}, "numericalcomputation": {"ignore": [], "suggests": ["python-sciscipy", "scilab-jims", "scilab-metanet", "libscirenderer-java", "hpcc", "libcneartree-dev", "matlab-support", "libsundials-serial-dev", "octave-sundials", "libquantum-dev"], "depends": ["octave", "python-matplotlib", "python-scipy", "ipython", "python-numpy", "spyder", "python-guiqwt", "pdl", "gnudatalanguage", "scilab", "scilab-sivp", "scilab-scimax", "scilab-swt", "scilab-ann", "scilab-plotlib", "freemat", "yorick", "r-base", "qtoctave", "lush", "yade", "liggghts", "esys-particle", "python-scitools", "python-deap", "python-tables | python3-tables", "vitables", "octavede", "lammps", "julia", "admesh", "metis", "python-gts", "python-demgengeo", "coinor-symphony", "coinor-clp", "metis-edf", "libsuitesparse-dev", "libsuitesparse-metis-dev", "libdune-grid-dev"], "recommends": [], "avoid": []}, "typesetting": {"ignore": [], "suggests": ["tellico", "texmaker", "openoffice.org-dmaths", "r-cran-xtable", "csv2latex", "libgtkmathview-bin", "svgtoipe", "pymarc", "luasseq", "libqtexengine-dev"], "depends": ["referencer", "kbibtex", "impose+", "pybliographer", "texlive-bibtex-extra", "jabref", "bibutils", "biber", "feynmf", "texlive", "texlive-science", "texlive-publishers", "texlive-math-extra", "diploma", "lyx", "texmacs", "texmacs-extra-fonts", "auctex", "xfig", "transfig", "dia", "bibus", "mlpost", "latexdiff", "libjlatexmath-java", "cb2bib", "jeuclid-mathviewer", "sketch", "ipe", "ipe5toxml", "quaneko", "gpapers", "zotero"], "recommends": [], "avoid": []}, "engineering-dev": {"ignore": [], "suggests": ["libgtkdatabox-0.9.2-0-dev", "libgtkdataboxmm-dev", "libqwt-dev | libqwt5-qt4-dev", "openturns-examples", "libdiet-sed2.8-dev", "libdiet-client2.8-dev", "libdiet-dagda2.8-dev", "libdiet-admin2.8-dev"], "depends": ["libalberta2-dev", "code-saturne-bin", "code-saturne-include", "libcgns-dev", "libitpp-dev", "libfreefoam-dev", "libadios-dev", "libbox-dev", "libsilo-dev", "libxdmf-dev", "libgetfem++-dev", "libhdf5-serial-dev", "libjhdf5-java", "libjhdf4-java", "pycgns", "liboce-visualization-dev", "liboce-ocaf-dev", "libdeal.ii-dev", "liblife-dev", "libluminate-dev", "libopenturns-dev", "libmadlib-dev", "libtet1.4-dev", "libslepc3.4.2-dev", "libelmer-dev", "libmed-dev", "libmedc-dev", "libmedimport-dev", "libnetcdf-dev", "python-netcdf", "libnetcdf-java", "syfi-dev", "libmesh-dev", "libnfft3-dev", "libnlopt-dev", "python-fftw3", "libcoin80-dev", "libmetis-edf-dev", "libslicot-dev", "python-collada", "libann-dev", "libflann-dev", "libdime-dev", "libdxflib-dev", "salome-kernel-dev"], "recommends": [], "avoid": []}, "neuroscience-modeling": {"ignore": [], "suggests": ["python-pynn", "moose", "pcsim", "nest", "invt", "xppaut"], "depends": ["python-brian", "cnrun"], "recommends": [], "avoid": []}, "astronomy-dev": {"ignore": [], "suggests": [], "depends": ["libnova-dev", "libworldwind-java", "libccfits-dev", "libcfitsio3-dev", "python-pyfits", "libqfits-dev", "slang-cfitsio", "libastro-fits-cfitsio-perl", "libsofa-c-dev", "libstarlink-pal-dev", "libstarlink-ast-dev", "libwcstools-dev", "wcslib-dev", "libcpl-dev", "python-pywcs", "python-cpl", "python-astropy-legacy", "libgyoto1-dev", "casacore-dev", "liberfa-dev", "libfits-java", "libivoafits-java", "tcl-fitstcl"], "recommends": [], "avoid": []}, "astronomy": {"ignore": ["gstar"], "suggests": ["yorick-cubeview", "yorick-mira", "yorick-spydr", "yorick-yao", "yorick-svipc", "yorick-gyoto", "sunclock", "xtide", "xtide-data", "scilab-celestlab", "scilab-overload", "scilab-scimysql", "cpl-plugin-amber", "cpl-plugin-fors", "cpl-plugin-giraf", "cpl-plugin-hawki", "cpl-plugin-sinfo", "cpl-plugin-kmos", "cpl-plugin-vimos", "cpl-plugin-uves", "cpl-plugin-xsh", "pdl", "pgplot5", "python-scientific", "stars"], "depends": ["gcx", "xorsa", "astronomical-almanac", "lightspeed", "openuniverse", "sextractor", "worldwind", "wcstools", "wcslib-tools", "funtools", "qfits-tools", "gpredict", "predict", "seesat5", "yorick-full", "savi", "stellarium", "xplanet", "xplanet-images", "celestia", "kstars", "starplot", "lynkeos.app", "stardata-common", "gliese", "yale", "boinc-app-milkyway", "boinc-app-seti", "gyoto", "skycat", "ftools-fv", "fitsverify", "fitscheck", "casacore-tools", "iraf", "x11iraf", "python-pyraf", "saods9", "xpa-tools", "python-pywcs", "python-astropy", "python-pyfits", "python3-pyfits", "python-pyds9", "esorex", "python-cpl", "xephem", "orbfit", "linoccult", "midas", "ssystem", "spacechart"], "recommends": [], "avoid": []}, "logic": {"ignore": [], "suggests": [], "depends": ["agda", "coq", "hol-light", "hol88", "matita", "proofgeneral", "depqbf", "picosat", "sat4j", "alt-ergo", "boolector", "cvc3", "prover9", "mace2", "maude", "spass", "coinor-cbc", "minisat+", "clasp", "coala", "gringo", "lbt", "maria", "mona"], "recommends": ["otter"], "avoid": []}, "physics-dev": {"ignore": [], "suggests": ["libtriangle-dev"], "depends": ["libfreefoam-dev", "pyfai", "libnfft3-dev", "python-fftw3", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libopenctm-dev", "python-openctm", "python-quantities"], "recommends": [], "avoid": []}, "chemistry": {"ignore": [], "suggests": ["gdpc-examples", "python-mzml-doc"], "depends": ["apbs", "bkchem", "bodr", "libcdk-java", "chemeq", "chemical-mime-data", "chemtool", "easychem", "gabedit", "galculator", "garlic", "gausssum", "gchempaint", "gdis", "ghemical", "gcrystal", "gcu-bin", "gcu-plugin", "gperiodic", "gromacs | gromacs-mpich | gromacs-openmpi", "kalzium", "katomic", "mopac7-bin", "mpqc", "mpqc-support", "openbabel", "python-openbabel", "psi3", "pymol", "viewmol", "xdrawchem", "xmakemol-gl | xmakemol", "v-sim", "rasmol", "adun.app", "gdpc", "xbs", "gelemental", "avogadro", "gamgi", "massxpert", "drawxtl", "chemical-structures", "freefoam", "pyfai", "python-mmtk", "libegad", "libint", "molden", "molekel", "tinker", "jmol", "qutemol", "cp2k", "pdb2pqr", "mmass", "mmass-modules", "python-mzml", "tandem-mass", "openchrom", "fdmnes"], "recommends": [], "avoid": []}, "dataacquisition-dev": {"ignore": [], "suggests": [], "depends": ["libnarval1-dev", "libtango8-dev", "liblog4tango5-dev"], "recommends": [], "avoid": []}, "bci": {"ignore": [], "suggests": ["pyff", "pybci", "bcpy2000", "bci2000", "emokit", "openvibe"], "depends": [], "recommends": [], "avoid": []}, "nanoscale-physics-dev": {"ignore": [], "suggests": ["libfftw3-doc", "liblife-dev", "oce-draw", "python-netcdf"], "depends": ["abinit-doc", "libblas-dev", "libblas-doc", "liblapack-dev", "liblapack-doc", "libetsf-io-dev", "libetsf-io-doc", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libgsl0-dev", "gsl-bin", "gsl-doc-info", "gsl-ref-html | gsl-ref-psdoc", "libnetcdf-dev", "netcdf-doc", "libtrilinos-dev", "libtrilinos-doc", "libxc-dev", "libopenmpi-dev | libmpich-dev", "wannier90-dev", "liboce-visualization-dev", "liboce-ocaf-dev", "libfox95", "libnbc", "libpspio", "libxc", "spglib", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "python-fabio", "libcbf-dev", "pyfai"], "recommends": ["gsl-doc-pdf", "libblacs-mpi-dev", "libscalapack-mpi-dev", "scalapack-doc", "science-mathematics-dev"], "avoid": []}, "geometry": {"ignore": [], "suggests": ["libcgal-dev", "libgeometry-primitive-perl", "libmath-geometry-voronoi-perl", "octave-geometry"], "depends": ["carmetal", "salome-geom", "drgeo", "geogebra-kde"], "recommends": [], "avoid": []}, "physics": {"ignore": [], "suggests": ["paw-demos", "science-statistics", "science-mathematics", "scilab-sivp", "openctm-tools", "life-apps", "liblife-dev"], "depends": ["cernlib", "geant321", "paw++", "paw", "clhep", "geant4", "abinit | mpqc | openmx | psi3", "gerris", "feynmf", "freefoam", "fityk", "horae", "ifeffit", "sixpack", "tessa | tessa-mpi", "science-numericalcomputation", "oce-draw", "science-electronics", "v-sim", "gpiv", "gpivtools", "maxima", "python-sympy", "axiom", "meshlab", "cadabra", "drawxtl", "opticalraytracer", "ghkl", "python-deap", "etsf-io", "pymca", "quantum-espresso", "gwyddion", "blzpack", "gate", "openfoam", "jfreemesh", "spis", "espresso++", "cp2k", "octaviz", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "fdmnes"], "recommends": [], "avoid": []}, "meteorology": {"ignore": [], "suggests": ["paraview", "gnudatalanguage", "r-base", "octave-octcdf", "gerris", "python-openturns", "python-dap"], "depends": ["cdo", "nco", "dballe", "zygrib", "ncview", "grads", "ferret-vis", "magics++", "freefoam", "visit", "libgrib-api-tools", "ecaccess", "geonetwork", "ncl", "python-netcdf", "python-grib", "python-drslib", "python-cmor", "python-sphere", "cmip5-cmor-tables", "aweather", "libdap-bin", "libdap-doc", "vistrails"], "recommends": [], "avoid": []}, "viewing": {"ignore": [], "suggests": ["libgrits-dev", "worldwind", "med-imaging", "libgtkmathview-bin", "jeuclid-mathviewer", "texlive-pictures", "pgplot5", "r-cran-plotrix", "r-cran-colorspace", "r-cran-labeling", "r-cran-scales", "r-cran-ggplot2", "r-cran-aplpack", "findimagedupes", "libpuzzle-bin", "python-matplotlib", "python-scitools", "circos", "circos-tools", "libqglviewer-dev", "libcoin80-dev", "libsoqt4-dev", "libvtk5-dev", "libvtk5-qt4-dev", "tcl-vtk", "python-vtk", "libvtk-java", "vtk-examples", "python-pivy"], "depends": ["vistrails", "pdl", "gnudatalanguage", "kst", "ifrit", "yorick", "python-scientific", "fityk", "gnuplot", "grace", "gri", "labplot", "graphviz", "pyxplot", "plotdrop", "qtiplot", "python-guiqwt", "imview", "mayavi2", "g3data", "gwyddion", "paraview", "visit", "gle-graphics", "gmsh", "lybniz", "3depict", "mathgl", "udav", "python-viper", "matlab2tikz", "cassandra", "pgfplots", "feedgnuplot", "libgnuplot-iostream-dev", "libqglviewer2", "python-gnuplot", "ovito", "scidavis"], "recommends": [], "avoid": []}, "devices": {"ignore": [], "suggests": ["libticables-dev", "libticalcs-dev", "libticonv-dev", "libtifiles-dev"], "depends": ["expeyes", "gfm", "tiemu", "tilem", "tilp2", "bossa", "bossa-cli"], "recommends": [], "avoid": []}, "nanoscale-physics": {"ignore": [], "suggests": ["openmpi-doc | mpich-doc | lam-mpidoc", "dx", "dx-doc", "gmsh", "gpiv", "gpivtools", "life-apps", "qtiplot", "scidavis", "science-statistics", "science-mathematics", "scilab-sivp"], "depends": ["abinit", "mpqc", "openmx", "psi3", "quantum-espresso", "drawxtl", "etsf-io", "feynmf", "fityk", "gnuplot", "grace", "horae", "ifeffit", "sixpack", "libblas3gf", "liblapack3gf", "libfftw3-3", "libgsl0ldbl", "gsl-bin", "netcdf-bin", "netcdf-doc", "nco", "ncview", "openmpi-bin | mpich", "science-numericalcomputation", "avogadro", "garlic", "gdis", "ghemical", "v-sim", "gwyddion", "ape", "atompaw", "bigdft", "cp2k", "espresso++", "exciting", "gpaw", "octopus", "pymca", "python-ase", "wannier90", "qtoctave", "octaviz", "fdmnes", "cbflib-bin"], "recommends": ["axiom", "maxima", "cadabra", "extrema", "ggobi", "mayavi2", "udav", "gperiodic", "python-elemental", "graphviz", "libblacs-mpi1", "libscalapack-mpi1", "python-scientific", "python-scipy", "python-scitools", "python-sympy", "pyxplot"], "avoid": []}, "social": {"ignore": [], "suggests": [], "depends": ["opensesame"], "recommends": [], "avoid": []}, "distributedcomputing": {"ignore": [], "suggests": ["hpcc", "coop-computing-tools", "python-mpi4py", "psom", "octave-mpi"], "depends": ["ipython", "torque-common", "torque-server", "nordugrid-arc-nox", "gridengine-client", "gridengine-exec", "gridengine-master", "gridengine-qmon", "globus-core", "openmpi-bin", "mpich", "openmpipython", "mpich2python", "python-mpi", "condor", "dmtcp", "environment-modules"], "recommends": [], "avoid": []}, "psychophysics": {"ignore": [], "suggests": ["science-neuroscience-cognitive", "science-bci", "visionegg", "python-pyxid", "tscope", "opensesame", "psytoolkit", "debruijn", "psychlops", "pebl"], "depends": ["psychopy", "python-pyoptical", "python-pyepl", "libfreenect-dev", "nrec"], "recommends": ["octave-psychtoolbox-3"], "avoid": []}, "meteorology-dev": {"ignore": [], "suggests": ["gfortran", "ksh", "pkg-config", "openturns-examples", "liblife-dev"], "depends": ["libemos-dev", "libgadap-dev", "libcmor-dev", "libgrib-api-dev", "libgrib-api-tools", "libgrib2c-dev", "libhe5-hdfeos-dev", "libhdfeos-dev", "libproj-dev", "libgctp-dev", "libnetcdf-dev", "netcdf-bin", "liblapack-dev", "libblas-dev", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libblas-doc", "liblapack-doc", "libfftw3-doc", "liblas-dev", "libsphere-dev", "libterralib-dev", "liboasis3-dev", "libudunits2-dev", "libdap-dev", "python-openturns", "libopenturns-dev", "wcslib-dev", "wcslib-doc", "libfreefoam-dev", "librsl-dev"], "recommends": [], "avoid": []}}
\ No newline at end of file
--
Debian Science Blend
More information about the Blends-commit
mailing list