[Blends-commit] [SCM] science branch, master, updated. b896861569f937056ddba605442a8b27aa3be23f
Andreas Tille
tille at debian.org
Thu Jun 19 09:03:51 UTC 2014
The following commit has been merged in the master branch:
commit 78b0a48c6f76e7ff1fb17fee3218e35a74e3912b
Author: Andreas Tille <tille at debian.org>
Date: Thu Jun 19 10:26:50 2014 +0200
Use blends-dev from GSoC to generate automatic changelog entry and JSON change data
diff --git a/debian/changelog b/debian/changelog
index 2ffcfec..69c1fa7 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -12,6 +12,108 @@ debian-science (1.2) UNRELEASED; urgency=medium
replacement, liberfa-dev, is already in astronomy-dev.
Closes: #751487
+ * start of automatic changelog entry *
+
+ * Changes in metapackage dependencies
+ -science-economics
+ added:
+ Depends: r-cran-pwt8
+ -science-viewing-dev
+ added:
+ Depends: libchealpix-dev
+ -science-robotics
+ added:
+ Depends: octovis, octomap-tools
+ Suggests: octovis
+ -science-robotics-dev
+ added:
+ Depends: libccd-dev, liboctomap-dev
+ -science-simulations
+ added:
+ Depends: music-bin
+ -science-dataacquisition
+ added:
+ Depends: xyscan, filo
+ -science-statistics
+ added:
+ Depends: r-cran-energy, rstudio, r-cran-mvnormtest, r-cran-expm, r-cran-ecodist
+ -science-imageanalysis
+ added:
+ Suggests: python-vigra, libvigraimpex-dev
+ -science-mathematics-dev
+ added:
+ Depends: python-pynfft | python3-pynfft, libsuperlu-dev, python-fftw3 | python3-fftw3
+ removed:
+ Depends: libsuperlu3-dev, liblife-dev, python-fftw3
+ -science-mathematics
+ removed:
+ Depends: life-apps
+ -science-electronics
+ added:
+ Depends: geda-gaf, geda-xgsch2pcb, drawtiming, gwave, qsapecng, gtkwave, gnusim8085
+ Suggests: libfeel++-dev
+ removed:
+ Suggests: liblife-dev
+ -science-numericalcomputation
+ added:
+ Depends: python-csa, algotutor, libadolc-dev, libcolpack-dev
+ -science-typesetting
+ added:
+ Depends: zotero-standalone
+ Suggests: xul-ext-zotero
+ removed:
+ Depends: zotero
+ -science-engineering-dev
+ added:
+ Depends: python-nfft3 | python3-nfft3, libfeel++-dev, python-fftw3 | python3-fftw3
+ removed:
+ Depends: python-fftw3, liblife-dev
+ -science-viewing
+ added:
+ Depends: ctioga2, veusz, python-seaborn
+ -science-astronomy-dev
+ added:
+ Depends: libhealipx-cxx-dev, libchealpix-dev, python-healpy
+ removed:
+ Depends: libsofa-c-dev
+ -science-astronomy
+ added:
+ Depends: wxastrocapture, audela, eso-midas
+ Suggests: python-healpy
+ removed:
+ Depends: midas
+ -science-engineering
+ added:
+ Depends: libadios-bin, feel++-apps, sfc
+ removed:
+ Depends: life-apps, syfi-bin
+ -science-physics-dev
+ added:
+ Depends: python-fftw3 | python3-fftw3, python-pynfft | python3-pynfft, libfeel++-dev, libismrmrd-dev, python-multipletau | python3-multipletau
+ removed:
+ Depends: python-fftw3
+ -science-nanoscale-physics-dev
+ added:
+ Suggests: libfeel++-dev
+ removed:
+ Suggests: liblife-dev
+ -science-nanoscale-physics
+ added:
+ Suggests: feel++-apps
+ removed:
+ Suggests: life-apps
+ -science-physics
+ added:
+ Suggests: feel++-apps
+ removed:
+ Suggests: liblife-dev, life-apps
+ -science-meteorology-dev
+ added:
+ Depends: libwreport-dev
+ Suggests: libfeel++-dev
+ removed:
+ Suggests: liblife-dev
+
-- Andreas Tille <tille at debian.org> Thu, 19 Jun 2014 10:20:04 +0200
debian-science (1.1) unstable; urgency=low
diff --git a/dependency_data/debian-science_1.2.json b/dependency_data/debian-science_1.2.json
new file mode 100644
index 0000000..d12ca82
--- /dev/null
+++ b/dependency_data/debian-science_1.2.json
@@ -0,0 +1 @@
+{"neuroscience-cognitive": {"ignore": [], "suggests": ["science-typesetting", "science-psychophysics", "fieldtrip", "eeglab", "debruijn", "freesurfer", "xnat", "pysurfer", "connectomeviewer", "hid"], "depends": ["psignifit", "amide", "dicomnifti", "minc-tools", "medcon", "xmedcon", "nifti-bin", "python-nifti", "fsl", "fslview", "python-mvpa", "caret", "python-pyepl", "praat", "slicer", "dicom3tools", "voxbo", "bioimagesuite", "afni", "mni-autoreg", "mni-n3", "brainvisa", "lipsia", "openmeeg-tools", "mricron", "itksnap", "python-pypsignifit", "python-statsmodels", "spm8", "iqr", "mriconvert", "python-pyxnat"], "recommends": [], "avoid": []}, "meteorology": {"ignore": [], "suggests": ["paraview", "gnudatalanguage", "r-base", "octave-octcdf", "gerris", "python-openturns", "python-dap"], "depends": ["cdo", "nco", "dballe", "zygrib", "ncview", "grads", "ferret-vis", "magics++", "freefoam", "visit", "libgrib-api-tools", "ecaccess", "geonetwork", "ncl", "python-netcdf", "python-grib", "python-drslib", "python-cmor", "python-sphere", "cmip5-cmor-tables", "aweather", "libdap-bin", "libdap-doc", "vistrails"], "recommends": [], "avoid": []}, "viewing-dev": {"ignore": [], "suggests": [], "depends": ["pdl", "gnudatalanguage", "python-scientific", "libgrits-dev", "python-matplotlib", "python-scitools", "libgnuplot-iostream-dev", "libqglviewer-dev", "python-gnuplot", "libcoin80-dev", "libsoqt4-dev", "libvtk5-dev", "libvtk5-qt4-dev", "tcl-vtk", "python-vtk", "libvtk-java", "vtk-examples", "python-pivy", "libgtkdataboxmm-dev", "libgtkdatabox-0.9.2-0-dev", "libeinspline-dev", "inventor-dev", "libqtexengine-dev", "libqwtplot3d-qt4-dev", "python-qwt3d-qt4", "libchealpix-dev"], "recommends": [], "avoid": []}, "robotics": {"ignore": [], "suggests": ["arduino-mk", "ompl-demos", "libcoin60-runtime", "libvtk5.4", "octave", "gnuplot", "octovis"], "depends": ["rtai", "xenomai-runtime", "morse-simulator", "choreonoid", "liburdfdom-tools", "solid", "robot-player", "d-collide", "rtnet", "orca", "roboop", "orocos-rtt", "orocos-kdl", "orocos-ocl", "orocos-bfl", "ros", "openrtm", "openhrp", "pcl", "gazebo", "openrave", "octomap-tools", "octovis"], "recommends": [], "avoid": []}, "robotics-dev": {"ignore": [], "suggests": ["visp-images-data"], "depends": ["libcv-dev", "libroboptim-core-dev", "libvisp-dev", "libcnoid-dev", "libode-dev", "libompl-dev", "liboctomap-dev", "libopenigtlink-dev", "liburdfdom-dev", "liburdfdom-headers-dev", "libslicot-dev", "libsdformat-dev", "libconsole-bridge-dev", "libcomedi-dev", "python-comedilib", "libccd-dev"], "recommends": [], "avoid": []}, "highenergy-physics": {"ignore": [], "suggests": ["paw-demos", "geant321-doc", "lhapdf-pdfsets-minimal", "root-system-doc"], "depends": ["cernlib", "cernlib-base", "cernlib-core", "cernlib-extras", "dzedit", "kuipc", "kxterm", "nypatchy", "pawserv", "zftp", "paw", "paw++", "cernlib-montecarlo", "geant321", "feynmf", "looptools", "python-lhapdf", "octave-lhapdf", "root-macro-fastjet", "pythia8-root-interface", "libroot-bindings-python5.34", "libroot-bindings-ruby5.34", "libroot-graf3d-gl5.34", "libroot-io-xmlparser5.34", "libroot-math-mathmore5.34", "libroot-math-unuran5.34", "libroot-misc-memstat5.34", "libroot-misc-table5.34", "libroot-net-bonjour5.34", "libroot-net-ldap5.34", "libroot-proof-clarens5.34", "libroot-roofit5.34", "libroot-geom5.34", "libroot-graf2d-gpad5.34", "libroot-graf2d-graf5.34", "libroot-graf2d-postscript5.34", "libroot-graf3d-eve5.34", "libroot-graf3d-g3d5.34", "libroot-gui5.34", "libroot-gui-ged5.34", "libroot-hist5.34", "libroot-hist-spectrum5.34", "libroot-html5.34", "libroot-io5.34", "libroot-math-foam5.34", "libroot-math-genvector5.34", "libroot-math-mathcore5.34", "libroot-math-matrix5.34", "libroot-math-minuit5.34", "libroot-math-mlp5.34", "libroot-math-physics5.34", "libroot-math-quadp5.34", "libroot-math-smatrix5.34", "libroot-math-splot5.34", "libroot-misc-minicern5.34", "libroot-montecarlo-eg5.34", "libroot-montecarlo-vmc5.34", "libroot-net5.34", "libroot-net-auth5.34", "libroot-proof5.34", "libroot-proof-proofplayer5.34", "libroot-tmva5.34", "libroot-tree5.34", "libroot-tree-treeplayer5.34", "libroot-core5.34", "root-plugin-graf2d-asimage", "root-plugin-geom-gdml", "root-plugin-gui-qt", "root-plugin-graf2d-qt", "root-plugin-math-fftw3", "root-plugin-math-minuit2", "root-plugin-montecarlo-pythia8", "root-plugin-net-globus", "root-plugin-net-krb5", "root-plugin-proof-peac", "root-plugin-sql-mysql", "root-plugin-sql-odbc", "root-plugin-sql-pgsql", "root-plugin-geom-geombuilder", "root-plugin-geom-geompainter", "root-plugin-graf2d-x11", "root-plugin-graf3d-x3d", "root-plugin-gui-fitpanel", "root-plugin-gui-guibuilder", "root-plugin-gui-sessionviewer", "root-plugin-hist-hbook", "root-plugin-hist-histpainter", "root-plugin-hist-spectrumpainter", "root-plugin-io-sql", "root-plugin-io-xml", "root-plugin-math-fumili", "root-plugin-tree-treeviewer", "root-system-proofd", "root-system-rootd", "root-system-bin", "root-system-common", "root-system", "rivet", "rivet-plugins", "python-rivet", "rivet-root-converter", "thepeg", "thepeg-gui", "herwig++", "geant4"], "recommends": [], "avoid": []}, "psychophysics": {"ignore": [], "suggests": ["science-neuroscience-cognitive", "science-bci", "visionegg", "python-pyxid", "tscope", "opensesame", "psytoolkit", "debruijn", "psychlops", "pebl"], "depends": ["psychopy", "python-pyoptical", "python-pyepl", "libfreenect-dev", "nrec"], "recommends": ["octave-psychtoolbox-3"], "avoid": []}, "simulations": {"ignore": [], "suggests": [], "depends": ["sumo", "esys-particle", "lammps", "liggghts", "yade", "python-deap", "freefoam", "getdp", "fdmnes", "radiance", "music-bin"], "recommends": [], "avoid": []}, "neuroscience-datasets": {"ignore": [], "suggests": [], "depends": ["mni-icbm152-nlin-2009", "mni-colin27-nifti", "haxby2001-faceobject", "fsl-harvard-oxford-atlases", "fsl-juelich-histological-atlas", "fsl-jhu-dti-whitematter-atlas", "fsl-mni-structural-atlas", "fsl-talairach-daemon-atlas", "fsl-oxford-thalamic-connectivity-atlas", "fsl-bangor-cerebellar-atlas", "mclaren-rhesus-macaque-atlas", "sri24-atlas"], "recommends": [], "avoid": []}, "financial": {"ignore": [], "suggests": [], "depends": ["r-cran-fasianoptions", "r-cran-fassets", "r-cran-fbasics", "r-cran-fbonds", "r-cran-fcopulae", "r-cran-fexoticoptions", "r-cran-fextremes", "r-cran-fgarch", "r-cran-fimport", "r-cran-fmultivar", "r-cran-fnonlinear", "r-cran-foptions", "r-cran-fregression", "r-cran-ftrading", "r-cran-funitroots", "r-cran-timedate", "r-cran-timeseries", "r-cran-fportfolio"], "recommends": [], "avoid": []}, "tools": {"ignore": [], "suggests": ["libmrmpi-dev", "python-mrjob"], "depends": ["pegasus-wms", "openstereogram", "xoscope"], "recommends": [], "avoid": []}, "geography": {"ignore": [], "suggests": ["googleearth-package", "sumo", "grace6"], "depends": ["gis-workstation", "grass", "qgis", "qgis-plugin-grass", "proj-bin", "mapserver-bin", "gmt", "gpsbabel", "gpx2shp", "gpsd", "gpsdrive", "gpsman", "earth3d", "openscenegraph", "thuban", "drawmap", "gpstrans", "geoip-bin", "gpsd-clients", "grass-doc", "php5-mapscript", "phppgadmin", "gpsmanshp", "viking", "avce00", "e00compr", "gdal-bin", "ogdi-bin", "postgis", "postgresql-9.3-postgis-2.1", "osm2pgsql", "josm", "josm-plugins", "merkaartor", "gosmore", "python-mapnik", "mapnik-utils", "osmpbf-bin", "imposm", "hyantesite", "r-cran-sp", "r-cran-maptools", "r-cran-mapdata", "r-cran-mapproj", "r-cran-maps", "pgadmin3", "openjump"], "recommends": [], "avoid": []}, "linguistics": {"ignore": [], "suggests": ["libticcutils2-dev", "frogdata", "libtimbl3-dev", "libtimbl4-dev", "libtimblserver2-dev", "libmbt0-dev", "libucto1-dev", "libfolia-dev", "python-timbl", "wnsqlbuilder"], "depends": ["wordnet", "apertium", "link-grammar", "artha", "sequitur-g2p", "timbl", "timblserver", "mbt", "mbtserver", "ucto", "dimbl", "frog", "collatinus", "travatar"], "recommends": [], "avoid": []}, "dataacquisition": {"ignore": [], "suggests": ["gnudatalanguage", "comedi-source", "rtai", "xenomai-runtime", "linux-image-2.6-rt", "rt-tests", "gpsd", "tango-db", "tango-starter", "tango-accesscontrol", "python-pytango", "python-taurus", "hart"], "depends": ["engauge-digitizer", "qtdmm", "g3data", "ktimetrace", "netcdf-bin", "python-sardana", "jaaa", "ghkl", "narval-utils", "xyscan", "filo", "python-visa", "mx-dataacquisition", "epics", "plot-digitizer", "libfreenect-dev", "opendap"], "recommends": [], "avoid": []}, "statistics": {"ignore": [], "suggests": ["r-cran-spc", "science-mathematics", "libtamuanova-dev"], "depends": ["ess", "littler", "r-recommended", "rkward", "r-cran-mapproj", "r-cran-abind", "r-cran-bayesm", "r-cran-boot", "r-cran-cairodevice", "r-cran-car", "r-cran-chron", "r-cran-cluster", "r-cran-coda", "r-cran-codetools", "r-cran-date", "r-cran-dbi", "r-cran-rms", "r-cran-eco", "r-cran-effects", "r-cran-fbasics", "r-cran-fcopulae", "r-cran-fecofin", "r-cran-fextremes", "r-cran-fmultivar", "r-cran-foptions", "r-cran-foreign", "r-cran-fportfolio", "r-cran-timedate", "r-cran-gdata", "r-cran-gmodels", "r-cran-gplots", "r-cran-gregmisc", "r-cran-gtools", "r-cran-hdf5", "r-cran-hmisc", "r-cran-its", "r-cran-kernsmooth", "r-cran-lattice", "r-cran-latticeextra", "r-cran-lhs", "r-cran-lme4", "r-cran-lmtest", "r-cran-mapdata", "r-cran-maps", "r-cran-matchit", "r-cran-matrix", "r-cran-mcmcpack", "r-cran-mgcv", "r-cran-misc3d", "r-cran-mnp", "r-cran-multcomp", "r-cran-mvtnorm", "r-cran-nlme", "r-cran-pscl", "r-cran-psy", "r-cran-qtl", "r-cran-quadprog", "r-cran-rcmdr", "r-cran-relimp", "r-cran-rggobi", "r-cran-rgl", "r-cran-rgtk2", "r-cran-rmpi", "r-cran-rmysql", "r-cran-rodbc", "r-cran-rpart", "r-cran-rpvm", "r-cran-rquantlib", "r-cran-rserve", "r-cran-rsprng", "r-cran-sandwich", "r-cran-sm", "r-cran-snow", "r-cran-strucchange", "r-cran-survival", "r-cran-tkrplot", "r-cran-tseries", "r-cran-vgam", "r-cran-mass", "r-cran-xml", "r-cran-zelig", "r-cran-zoo", "r-cran-msm", "r-cran-amore", "r-cran-teachingdemos", "r-cran-expm", "psignifit", "python-stats", "python-scipy", "r-cran-vcd", "r-cran-permute", "python-statsmodels", "r-cran-spam", "r-cran-spatstat", "r-cran-deldir", "r-cran-fastcluster", "r-cran-statmod", "python-openturns", "python-pandas", "r-cran-ecodist", "r-cran-energy", "r-cran-mvnormtest", "r-cran-acepack", "r-cran-fcalendar", "rstudio"], "recommends": [], "avoid": []}, "typesetting": {"ignore": [], "suggests": ["tellico", "texmaker", "openoffice.org-dmaths", "r-cran-xtable", "csv2latex", "libgtkmathview-bin", "svgtoipe", "xul-ext-zotero", "pymarc", "luasseq", "libqtexengine-dev"], "depends": ["referencer", "kbibtex", "impose+", "pybliographer", "texlive-bibtex-extra", "jabref", "bibutils", "biber", "feynmf", "texlive", "texlive-science", "texlive-publishers", "texlive-math-extra", "diploma", "lyx", "texmacs", "texmacs-extra-fonts", "auctex", "xfig", "transfig", "dia", "bibus", "mlpost", "latexdiff", "libjlatexmath-java", "cb2bib", "jeuclid-mathviewer", "sketch", "ipe", "ipe5toxml", "quaneko", "gpapers", "zotero-standalone"], "recommends": [], "avoid": []}, "imageanalysis": {"ignore": [], "suggests": ["scilab-sivp", "cimg-dev", "libsimage-dev", "libvlfeat-dev", "libvisad-java", "libvigraimpex-dev", "python-vigra"], "depends": ["gpivtools", "gpiv", "libcv-dev", "gwyddion", "teem-apps"], "recommends": [], "avoid": []}, "machine-learning": {"ignore": [], "suggests": ["science-statistics", "science-numericalcomputation", "libacovea-dev", "science-typesetting", "ask"], "depends": ["python-pyke", "gprolog", "yap", "libtorch3-dev", "libshogun-dev", "libfann-dev", "libsvm-dev", "libcomplearn-dev", "libqsearch-dev", "liblinear-dev", "libocas-dev", "python-scikits-learn", "python-mdp", "python-mlpy", "weka", "vowpal-wabbit", "r-cran-mass", "r-cran-bayesm", "r-cran-class", "r-cran-cluster", "r-cran-msm", "r-cran-mcmcpack", "r-cran-mnp", "r-cran-amore", "r-cran-gbm", "r-cran-tgp", "python-mvpa", "python-statsmodels", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "autoclass", "mcl", "scilab-ann", "libga-dev", "libevocosm-dev", "pgapack", "python-genetic", "octave-ga", "python-pyevolve", "flann", "lua-torch5", "lush", "libcv-dev", "python-opencv", "libvigraimpex-dev", "python-vigra", "pybrain", "libshark-dev", "python-pebl", "python-orange", "python-pymc"], "recommends": [], "avoid": []}, "mathematics-dev": {"ignore": [], "suggests": ["libtet1.4.2-dev", "libjlapack-java", "libmtj-java", "libnetlib-java", "libitpp-dev", "libnauty-dev", "liblrs-dev", "libqrupdate-dev", "openturns-examples", "cfortran", "givaro-dev-doc", "givaro-user-doc", "fflas-ffpack-dev-doc", "fflas-ffpack-user-doc", "libcliquer-dev", "libntl-dev", "libdune-istl-dev", "libdune-localfunctions-dev"], "depends": ["libmesh-dev", "libnglib-dev", "python-numpy", "python-numexpr | python3-numexpr", "libgsl0-dev", "liblapack-dev", "libatlas-base-dev", "libblas-dev", "libopenblas-dev", 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"science-numericalcomputation", "oce-draw", "science-electronics", "v-sim", "gpiv", "gpivtools", "maxima", "python-sympy", "axiom", "meshlab", "cadabra", "drawxtl", "opticalraytracer", "ghkl", "python-deap", "etsf-io", "pymca", "quantum-espresso", "gwyddion", "blzpack", "gate", "openfoam", "jfreemesh", "spis", "espresso++", "cp2k", "octaviz", "root-system", "libroot-tmva-dev", "libroot-montecarlo-vmc-dev", "libroot-math-mlp-dev", "fdmnes"], "recommends": [], "avoid": []}, "meteorology-dev": {"ignore": [], "suggests": ["gfortran", "ksh", "pkg-config", "openturns-examples", "libfeel++-dev"], "depends": ["libemos-dev", "libgadap-dev", "libcmor-dev", "libgrib-api-dev", "libgrib-api-tools", "libgrib2c-dev", "libhe5-hdfeos-dev", "libhdfeos-dev", "libproj-dev", "libgctp-dev", "libnetcdf-dev", "netcdf-bin", "liblapack-dev", "libblas-dev", "libfftw3-dev", "fftw-dev", "sfftw-dev", "libblas-doc", "liblapack-doc", "libfftw3-doc", "liblas-dev", "libsphere-dev", "libterralib-dev", "liboasis3-dev", "libudunits2-dev", "libdap-dev", "python-openturns", "libopenturns-dev", "wcslib-dev", "wcslib-doc", "libfreefoam-dev", "librsl-dev", "libwreport-dev"], "recommends": [], "avoid": []}}
\ No newline at end of file
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