[Blends-commit] r4096 - /projects/med/trunk/debian-med/tasks/cloud
tille at users.alioth.debian.org
tille at users.alioth.debian.org
Mon Nov 3 10:14:29 UTC 2014
Author: tille
Date: Mon Nov 3 10:14:29 2014
New Revision: 4096
URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=4096
Log:
It seems blends-dev does not like Depends fields without any content in the same line
Modified:
projects/med/trunk/debian-med/tasks/cloud
Modified: projects/med/trunk/debian-med/tasks/cloud
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/cloud?rev=4096&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/cloud (original)
+++ projects/med/trunk/debian-med/tasks/cloud Mon Nov 3 10:14:29 2014
@@ -6,19 +6,19 @@
in cloud computing clusters, where space can be limited.
X-Begin-Category: Phylogenetic analysis
-Depends:
+Depends: \
altree, clearcut, fastdnaml, fasttree, parsinsert, phyml, phyutility,
prime-phylo, mrbayes, tree-puzzle | tree-ppuzzle
X-End-Category: Phylogenetic analysis
X-Begin-Category: Genetics and genomics
-Depends:
+Depends: \
alien-hunter, bagpipe, fastlink, loki, gasic, genometools, plink,
probabel, r-cran-qtl, r-other-valdar-bagphenotype.library, r-other-mott-happy.hbrem
X-End-Category: Genetics
X-Begin-Category: Sequence alignments and related programs.
-Depends:
+Depends: \
amap-align, blast2, biosquid, boxshade, cassiopee, cdbfasta, cd-hit,
clustalo, clustalw, conservation-code, dialign, dialign-tx,
emboss, embassy-domalign, embassy-domainatrix, embassy-domsearch,
@@ -29,56 +29,57 @@
X-End-Category: Sequence alignments and related programs.
X-Begin-Category: High throughput sequencing
-Depends:
+Depends: \
bamtools, bedtools, fastx-toolkit, flexbar, picard-tools, samtools,
tabix, vcftools
Comment: Processing
-Depends:
+Depends: \
anfo, cufflinks, bowtie, bowtie2, bwa, last-align, maq, perm, tophat, smalt,
soapdenovo, soapdenovo2
Comment: Aligners
-Depends:
+Depends: \
abyss, mapsembler2, idba, minia, mira-assembler, ssake, velvet
Comment: Assembly
-Depends:
+Depends: \
ampliconnoise, arden, fastqc
Comment: Filtering and QC
-Depends:
+Depends: \
discosnp, dnaclust, fitgcp, giira, grinder, kissplice, macs, mothur,
paraclu, r-bioc-hilbertvis, sra-toolkit
Comment: Other
X-End-Category: High throughput sequencing
X-Begin-Category: Analysis of RNA sequences.
-Depends:
+Depends: \
aragorn, infernal, rnahybrid, rtax
X-End-Category: Analysis of RNA sequences.
X-Begin-Category: Molecular modelling and molecular dynamics
-Depends:
+Depends: \
autodock, autodock-vina, autogrid, concavity, dssp, freecontact,
gromacs, hhsuite, mustang, pdb2pqr, raster3d, theseus
Comment: non-free
X-End-Category: Molecular modelling and molecular dynamics
X-Begin-Category: Tools for the molecular biologist.
-Depends:
+Depends: \
melting, mipe, ncbi-epcr, primer3
Comment: Oligonucleotides and PCR
-Depends:
+Depends: \
acedb-other, disulfinder, ncbi-tools-bin, ncoils,
readseq, tigr-glimmer, seqan-apps, staden-io-libs-utils
+
Depends: python-cogent
Comment: non-free
X-End-Category: Tools for the molecular biologist.
X-Begin-Category: Others
-Depends:
+Depends: \
aevol, biomaj, bioperl, bioperl-run, cain, clonalframe, circos, datamash, filo,
prodigal, python-biopython, python3-biopython, qiime, r-bioc-edger,
r-cran-pvclust, r-cran-vegan
More information about the Blends-commit
mailing list