[Blends-commit] [SCM] website branch, master, updated. c9481c41ebb3c790ba8f73e10b1639dee221e7ab

[Akshita Jha]

The following commit has been merged in the master branch:
commit c9481c41ebb3c790ba8f73e10b1639dee221e7ab
Author: Akshita Jha <akshita-guest at users.alioth.debian.org>
Date:   Wed Aug 5 15:07:16 2015 +0530

    Modify blendstasktools_udd.py : Add citations/publications information

diff --git a/webtools_py3/blendstasktools_udd.py b/webtools_py3/blendstasktools_udd.py
index 9bf155a..1ff6158 100644
--- a/webtools_py3/blendstasktools_udd.py
+++ b/webtools_py3/blendstasktools_udd.py
@@ -759,6 +759,53 @@ class DependantPackage:
         #    ret += ", desc['en']:"   + str(self.desc['en'])
         return ret
 
+    def SetPublications(self, row):
+        for pub in ("year", "title", "authors", "doi", "pubmed", "url", "journal", "volume", "number", "pages", "eprint" ):
+            if row[pub]:
+                if pub == "pages":
+                    row[pub] = re.sub("--", "-", row[pub])
+                if (pub == "authors" and row[pub].count(" and ") or row[pub].count(" AND ")):
+                    # assume "authors" string is a regular BibTeX "and" separated list of authors
+                    row[pub] = re.sub("AND", "and", row[pub].strip())
+                    authors_list = row[pub].split(" and ")
+                    # normalize several BibTeX styles to "First Last, First Last and First Last":
+                    # 1. "First Last and First Last and First Last"
+                    # 2. "Last, First and Last, First and Last, First"
+                    # 3. "First Last, First Last and First Last"
+                    authors_string = ""
+                    while (authors_list):
+                        author = authors_list.pop(0)
+                        if (author.count(",") > 1):
+                            # 3. "First Last, First Last and First Last"
+                            # authors string is already in desired format, keep it
+                            authors_string = row[pub].strip()
+                            break
+                        elif (row[pub].count(",") == row[pub].count(" and ") + 1):
+                            # 2. "Last, First and Last, First and Last, First"
+                            # reverse last and first name
+                            (last, first) = author.split(", ")
+                            full_author = first + " " + last
+                        else:
+                            # 1. "First Last and First Last and First Last"
+                            full_author = author
+                        if (len(authors_list) > 1):
+                            authors_string += full_author + ", "
+                        elif (len(authors_list) > 0):
+                            authors_string += full_author + " and "
+                        else:
+                            authors_string += full_author
+                    if row[pub] != authors_string:
+                        # emergency brake if algorithm fails to detect non-names like '1000 Genome Project Data Processing Subgroup'
+                        if authors_string.count(',') > row[pub].count(' and '):
+                            logger.warning("Refuse to change Author string in %s: '%s'(%i) -> '%s'(%i)", \
+                                            self.pkg, to_unicode(row[pub]), row[pub].count(' and '), to_unicode(authors_string), authors_string.count(','))
+                        else:
+                            logger.debug("Author string changed in %s: '%s' -> '%s'", self.pkg, to_unicode(row[pub]), to_unicode(authors_string))
+                            row[pub] = authors_string
+                if 'published' not in self.properties:
+                    self.properties['published'] = {}
+                self.properties['published'][pub] = row[pub]
+
 
 class Tasks:
     # Provide a list of depencencies defined in metapackages
@@ -1207,6 +1254,9 @@ class TaskDependencies:
             dep.properties['maintainer'] = (row['maintainer'])
             dep.responsible = '<a href="mailto:%s">%s</a>' % (_url, (_name))
 
+            # Publications
+            dep.SetPublications(row)
+
             self._AppendDependency2List(dep)
 
     def GetTaskDependencies(self, source=0):

-- 
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