[Blends-commit] r4199 - in /projects/med/trunk/debian-med: debian-med-tasks.desc debian/changelog debian/control tasks/his
tille at users.alioth.debian.org
tille at users.alioth.debian.org
Thu Jul 2 16:31:19 UTC 2015
Author: tille
Date: Thu Jul 2 16:31:19 2015
New Revision: 4199
URL: http://svn.debian.org/wsvn/blends/?sc=1&rev=4199
Log:
Adapt tasks desciptions, update changelog, rerender dependencies
Modified:
projects/med/trunk/debian-med/debian-med-tasks.desc
projects/med/trunk/debian-med/debian/changelog
projects/med/trunk/debian-med/debian/control
projects/med/trunk/debian-med/tasks/his
Modified: projects/med/trunk/debian-med/debian-med-tasks.desc
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/debian-med-tasks.desc?rev=4199&op=diff
==============================================================================
--- projects/med/trunk/debian-med/debian-med-tasks.desc (original)
+++ projects/med/trunk/debian-med/debian-med-tasks.desc Thu Jul 2 16:31:19 2015
@@ -161,6 +161,7 @@
rna-star
topp
openms
+ scythe
arden
fitgcp
gasic
@@ -185,8 +186,11 @@
kissplice
ltrsift
macs
+ macsyfinder
+ progressivemauve
metastudent
mrs
+ murasaki
ncbi-seg
paraclu
parsinsert
@@ -203,11 +207,15 @@
r-bioc-biostrings
r-cran-vegan
relion-bin
+ rdp-alignment
rdp-readseq
seqtk
smalt
staden
+ subread
swarm
+ toppred
+ transdecoder
uc-echo
vsearch
zalign
@@ -259,6 +267,8 @@
libbiojava-java
libbiojava3-java
libgenome-1.3-dev
+ libmuscle-3.7-dev
+ libmems-1.6-dev
libai-fann-perl
libbio-mage-perl
libnhgri-blastall-perl
@@ -298,6 +308,7 @@
python-mmtk
libopenms-dev
libgenometools0-dev
+ librdp-taxonomy-tree-java
python-biom-format
python-rdkit
libgenome-perl
@@ -510,16 +521,16 @@
r-cran-diagnosismed
r-cran-epicalc
r-cran-epir
+ r-cran-seroincidence
Task: med-his
Section: debian-med
Description: Debian Med suggestions for Hospital Information Systems
- Currently Debian Med does not yet contain any software which can be
- regarded as Hospital Information System. There is some Free Software
- out there which might be interesting targets for inclusion into Debian
- and so we provide a list of these projects which might be included
- at a later point in time provided somebody is willing to take over
- the packaging work.
+ This metapackage contains dependencies for software and that could
+ be useful ro run a Hospital Information System. While there is
+ continuous work going on to package a ready to install system currently
+ only preconditions are finished but hopefully helpful in hospitals
+ anyway.
Relevance: 10
Key:
med-his
@@ -593,8 +604,8 @@
mia-tools
mialmpick
mia-viewit
+ ismrmrd-tools
sigviewer
- openmeeg-tools
plastimatch
biosig-tools
python-surfer
@@ -619,7 +630,6 @@
libmdc2-dev
libvtk5-dev
libnifti-dev
- libigstk4-dev
libinsighttoolkit3-dev
libvolpack1-dev
libgdcm2-dev
@@ -643,7 +653,6 @@
python-mia
r-cran-rniftilib
python-dicom
- libopenmeeg-dev
python-nibabel
libgdf-dev
octave-gdf
@@ -659,15 +668,13 @@
libvigraimpex-dev
python-vigra
libedf-dev
+ libismrmrd-dev
Task: med-laboratory
Section: debian-med
Description: Debian Med suggestions for medical laboratories
- Currently Debian Med does not yet contain any software which is
- specifically intended to run a medical laboratory. We just provide a
- list of Free Software that might be used and which might be included
- into Debian at a later point in time provided somebody is willing to
- take over the packaging work.
+ This metapackage contains dependencies for software and that could
+ be useful ro run a medical laboratory.
Relevance: 10
Key:
med-laboratory
@@ -732,7 +739,6 @@
freediams
freemedforms-emr
r-cran-medadherence
- clinica
entangle
qrisk2
@@ -749,7 +755,6 @@
praat
r-cran-foreign
psignifit
- python-pypsignifit
r-cran-psy
psychopy
Modified: projects/med/trunk/debian-med/debian/changelog
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/debian/changelog?rev=4199&op=diff
==============================================================================
--- projects/med/trunk/debian-med/debian/changelog (original)
+++ projects/med/trunk/debian-med/debian/changelog Thu Jul 2 16:31:19 2015
@@ -2,6 +2,8 @@
* Build-Depends: blends-dev (>= 0.6.92.3) to enable respecting user PATH
/usr/lib/debian-med/bin
+ * Fix bashism issue since fixed in blends-dev
+ Closes: #772308
* Rebuild in Jessie
* Updated descriptions for his and laboratory
* Introduce /usr/lib/debian-med/bin as PATH for Debian Med users
Modified: projects/med/trunk/debian-med/debian/control
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/debian/control?rev=4199&op=diff
==============================================================================
--- projects/med/trunk/debian-med/debian/control (original)
+++ projects/med/trunk/debian-med/debian/control Thu Jul 2 16:31:19 2015
@@ -796,12 +796,11 @@
vista-foia,
world-vista
Description: Debian Med suggestions for Hospital Information Systems
- Currently Debian Med does not yet contain any software which can be
- regarded as Hospital Information System. There is some Free Software
- out there which might be interesting targets for inclusion into Debian
- and so we provide a list of these projects which might be included
- at a later point in time provided somebody is willing to take over
- the packaging work.
+ This metapackage contains dependencies for software and that could
+ be useful ro run a Hospital Information System. While there is
+ continuous work going on to package a ready to install system currently
+ only preconditions are finished but hopefully helpful in hospitals
+ anyway.
Package: med-imaging
Section: metapackages
@@ -1041,11 +1040,8 @@
openelis,
openfreezer
Description: Debian Med suggestions for medical laboratories
- Currently Debian Med does not yet contain any software which is
- specifically intended to run a medical laboratory. We just provide a
- list of Free Software that might be used and which might be included
- into Debian at a later point in time provided somebody is willing to
- take over the packaging work.
+ This metapackage contains dependencies for software and that could
+ be useful ro run a medical laboratory.
Package: med-oncology
Section: metapackages
Modified: projects/med/trunk/debian-med/tasks/his
URL: http://svn.debian.org/wsvn/blends/projects/med/trunk/debian-med/tasks/his?rev=4199&op=diff
==============================================================================
--- projects/med/trunk/debian-med/tasks/his (original)
+++ projects/med/trunk/debian-med/tasks/his Thu Jul 2 16:31:19 2015
@@ -1,11 +1,10 @@
Task: Hospital Information Systems
Description: Debian Med suggestions for Hospital Information Systems
- Currently Debian Med does not yet contain any software which can be
- regarded as Hospital Information System. There is some Free Software
- out there which might be interesting targets for inclusion into Debian
- and so we provide a list of these projects which might be included
- at a later point in time provided somebody is willing to take over
- the packaging work.
+ This metapackage contains dependencies for software and that could
+ be useful ro run a Hospital Information System. While there is
+ continuous work going on to package a ready to install system currently
+ only preconditions are finished but hopefully helpful in hospitals
+ anyway.
Depends: care2x
Pkg-URL: http://sourceforge.net/projects/care2002/files/CARE2X/Care2X%202.6%20alpha/
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