[Blends-commit] [SCM] med branch, master, updated. 69136b2cf29517668947d5d4e76124fb0ac99315

Andreas Tille tille at debian.org
Thu Oct 15 06:33:05 UTC 2015


The following commit has been merged in the master branch:
commit 69136b2cf29517668947d5d4e76124fb0ac99315
Author: Andreas Tille <tille at debian.org>
Date:   Thu Oct 15 08:32:43 2015 +0200

    Package pyfaidx instead of pyfasta

diff --git a/tasks/bio-dev b/tasks/bio-dev
index c3162d2..bcbcf0e 100644
--- a/tasks/bio-dev
+++ b/tasks/bio-dev
@@ -246,7 +246,14 @@ Depends: python3-pbconsensuscore | python-pbconsensuscore
 
 Depends: python3-pyvcf | python-pyvcf
 
+Depends: python3-pyfaidx | python-pyfaidx
+
 Depends: python3-pyfasta | python-pyfasta
+Remark: Testsuite uncovers problems and code is not actively maintained
+ The upstream author of python-pyfasta confirmed that he stopped
+ the development and recommends python-pyfaidx instead.  So the
+ packaging code for python-pyfasta in SVN works but there is no
+ intend to really upload the package.
 
 Suggests: libbam-dev
 

-- 
Debian Med metapackages



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