[Blends-commit] [SCM] med branch, master, updated. bc09395741499c304f86c3f6c816527fd898b028
Andreas Tille
tille at debian.org
Mon Oct 19 15:03:17 UTC 2015
The following commit has been merged in the master branch:
commit bc09395741499c304f86c3f6c816527fd898b028
Author: Andreas Tille <tille at debian.org>
Date: Mon Oct 19 17:02:55 2015 +0200
jmodeltest packaging will be commited to Git
diff --git a/tasks/bio b/tasks/bio
index 1f781eb..2f38ac8 100644
--- a/tasks/bio
+++ b/tasks/bio
@@ -509,6 +509,8 @@ Depends: jaligner
Depends: jbrowse
+Depends: jmodeltest
+
Depends: kempbasu
Depends: kissplice
diff --git a/tasks/bio-phylogeny b/tasks/bio-phylogeny
index 7e1c138..d7618e0 100644
--- a/tasks/bio-phylogeny
+++ b/tasks/bio-phylogeny
@@ -151,17 +151,6 @@ Pkg-Description: Bayesian sampling of phylogenetic trees from molecular data
bayesian sampling of phylogenetic trees from these data.
Depends: jmodeltest
-Homepage: http://darwin.uvigo.es/software/jmodeltest.html
-License: GPL
-Pkg-Description: phylogenetic model averaging
- JModelTest is a tool to carry out statistical selection of best-fit
- models of nucleotide substitution. It implements five different model
- selection strategies: hierarchical and dynamical likelihood ratio tests
- (hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC),
- and a decision theory method (DT). It also provides estimates of model
- selection uncertainty, parameter importances and model-averaged
- parameter estimates, including model-averaged phylogenies. Please note
- that the DT weights are very gross
Depends: forester
--
Debian Med metapackages
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