[Blends-commit] [SCM] science branch, master, updated. dd25ceeb667704eb8ce83e14899300409c1d4982
Andreas Tille
tille at debian.org
Tue Apr 5 08:52:55 UTC 2016
The following commit has been merged in the master branch:
commit 60c351586fca895c7de8ed37e723114ef207e0f7
Author: Andreas Tille <tille at debian.org>
Date: Tue Apr 5 09:54:50 2016 +0200
Running `make dist` with blends-dev 0.9.3
diff --git a/debian-science-tasks.desc b/debian-science-tasks.desc
index 341fc92..87139de 100644
--- a/debian-science-tasks.desc
+++ b/debian-science-tasks.desc
@@ -1,79 +1,31 @@
+Task: debian-science
+Relevance: 9
+Section: debian-science
+Description: Debian Science Pure Blend
+ .
+
Task: science-astronomy
+Parent: debian-science
Section: debian-science
-Description: Debian Science Astronomy packages
- This metapackage will install Debian Science packages related to
- Astronomy. You might also be interested in field::astronomy debtag
- and, depending on your focus, in the education-astronomy metapackage.
-Relevance: 10
+Description: Debian Science Astronomy transitional package
+ Debian-Astro is now a separate Debian Pure Blend and allows a fine-grained
+ control on the topics to install. To ease the transition, this package will
+ install all user related tasks from Debian-Astro.
Key:
science-astronomy
-Packages: list
- gcx
- astronomical-almanac
- lightspeed
- openuniverse
- sextractor
- wcstools
- wcslib-tools
- funtools
- qfits-tools
- gpredict
- predict
- yorick-full
- savi
- stellarium
- xplanet
- lynkeos.app
- stardata-common
- boinc-app-seti
- gyoto
- skycat
- ftools-fv
- fitsverify
- fitscheck
- saods9
- xpa-tools
- python-pywcs
- python-astropy
- python3-astropy
- python-pyfits
- esorex
- python-cpl
- eso-midas
- wxastrocapture
- splash
Task: science-astronomy-dev
+Parent: debian-science
Section: debian-science
-Description: Debian Science Astronomy-dev packages
- This metapackage will install Debian Science packages which might be
- helpful for development of applications for Astronomy.
- .
- You might also be interested in the science-astronomy metapackage.
-Relevance: 10
+Description: Debian Science Astronomy-dev transitional package
+ Debian-Astro is now a separate Debian Pure Blend and allows a fine-grained
+ control on the topics to install. To ease the transition, this package will
+ install all development related tasks from Debian-Astro.
Key:
science-astronomy-dev
-Packages: list
- libnova-dev
- libccfits-dev
- libcfitsio3-dev
- python-pyfits
- libqfits-dev
- slang-cfitsio
- libastro-fits-cfitsio-perl
- libstarlink-pal-dev
- libstarlink-ast-dev
- libwcstools-dev
- wcslib-dev
- libcpl-dev
- python-pywcs
- python-cpl
- liberfa-dev
- libfits-java
- tcl-fitstcl
- libchealpix-dev
Task: science-bci
+Parent: debian-science
Section: debian-science
Description: Debian Science packages for the design and use of
brain-computer interface (BCI) -- direct communication pathway
@@ -86,10 +38,9 @@ Description: Debian Science packages for the design and use of
presentation, data collection and analysis software which could be
found in science-neuroscience-cognitive, science-dataacquisition,
data-machine-learning metapackages.
-Relevance: 10
-Packages: list
Task: science-biology
+Parent: debian-science
Section: debian-science
Description: Debian Science Biology packages
This metapackage will install Debian Science packages related to
@@ -101,112 +52,42 @@ Description: Debian Science Biology packages
you are most probably interested in the Debian Med project which
deals with biology and medicine in much more detail then the more
general Debian Science.
-Relevance: 10
Key:
science-biology
-Packages: list
- med-bio
- bauble
- critterding
Task: science-chemistry
+Parent: debian-science
Section: debian-science
Description: Debian Science Chemistry packages
This metapackage will install Debian Science packages related to
Chemistry. You might also be interested in the field::chemistry
debtag and, depending on your focus, in the education-chemistry
metapackage.
-Relevance: 10
Key:
science-chemistry
-Packages: list
- apbs
- bkchem
- bodr
- libcdk-java
- chemeq
- chemical-mime-data
- chemtool
- easychem
- gabedit
- galculator
- garlic
- gausssum
- gchempaint
- gdis
- gcrystal
- gcu-bin
- gcu-plugin
- gperiodic
- gromacs
- kalzium
- katomic
- mopac7-bin
- mpqc
- mpqc-support
- openbabel
- python-openbabel
- psi3
- pymol
- viewmol
- xdrawchem
- xmakemol-gl
- rasmol
- adun.app
- gdpc
- xbs
- gelemental
- avogadro
- gamgi
- massxpert
- drawxtl
- chemical-structures
- freefoam
- pyfai
- python-mmtk
- jmol
- qutemol
- cp2k
- pdb2pqr
- mmass
- mmass-modules
- python-mzml
- tandem-mass
Task: science-dataacquisition
+Parent: debian-science
Section: debian-science
Description: Debian Science data acquisition packages
This metapackage will install Debian Science packages related to data
acquisition. This might be used in several sciences (as for instance
science-viewing and science-typesetting).
-Relevance: 10
Key:
science-dataacquisition
-Packages: list
- engauge-digitizer
- g3data
- netcdf-bin
- python-sardana
- jaaa
- ghkl
- xyscan
- filo
- libfreenect-dev
Task: science-dataacquisition-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science data acquisition development packages
This metapackage will install Debian Science packages which are helpful
to develop applications related to data acquisition. This might be
used in several sciences.
-Relevance: 10
Key:
science-dataacquisition-dev
-Packages: list
- libtango8-dev
- liblog4tango5-dev
Task: science-devices
+Parent: debian-science
Section: debian-science
Description: Debian Science specific devices support
This task lists Debian Science packages which are dedicated to specific
@@ -215,38 +96,19 @@ Description: Debian Science specific devices support
.
Note that there is no according metapackage created since the packages
might be to different to make sense to install all on one machine.
-Relevance: 10
-Packages: list
- expeyes
- gfm
- tiemu
- tilem
- tilp2
- bossa
- bossa-cli
Task: science-distributedcomputing
+Parent: debian-science
Section: debian-science
Description: Debian Science Distributed Computing packages
This metapackage will install Debian Science packages useful for
various types of distributed computing, such as grid-, cloud-, cluster-
and parallel-computing.
-Relevance: 10
Key:
science-distributedcomputing
-Packages: list
- ipython
- globus-core
- openmpi-bin
- mpich
- openmpipython
- mpich2python
- python-mpi
- htcondor
- dmtcp
- environment-modules
Task: science-economics
+Parent: debian-science
Section: debian-science
Description: Debian Science Economics packages
This metapackage will install Debian Science packages useful for economics and
@@ -255,103 +117,22 @@ Description: Debian Science Economics packages
environments which can solve a wide range of problems typically encountered in
economic research. These environments provide functionalities similar to those
of popular non-free systems (such as MATLAB, Mathematica, Stata or SAS).
-Relevance: 10
Key:
science-economics
-Packages: list
- dynare
- gretl
- octave
- octave-econometrics
- octave-statistics
- octave-gsl
- octave-optim
- octave-linear-algebra
- octave-io
- octave-symbolic
- octave-dataframe
- qtoctave
- r-base
- r-cran-urca
- r-cran-bayesm
- r-cran-coda
- r-cran-boot
- r-cran-foreign
- r-cran-kernsmooth
- r-cran-matrix
- r-cran-nlme
- r-cran-hmisc
- r-cran-tseries
- r-cran-mfilter
- r-cran-lme4
- r-cran-mcmcpack
- r-cran-quadprog
- r-cran-fbonds
- r-cran-fimport
- r-cran-funitroots
- r-cran-wdi
- r-cran-pwt
- r-cran-pwt8
- rkward
- julia
- maxima
- wxmaxima
- ipython
- python-matplotlib
- python-numpy
- python-scipy
- python-scitools
- python-statsmodels
- python-pandas
- python-simpy
Task: science-electronics
+Parent: debian-science
Section: debian-science
Description: Debian Science Electronics packages
This metapackage will install Debian Science packages related to
Electronics. You might also be interested in the field::electronics
debtag and, depending on your focus, in the education-electronics
metapackage.
-Relevance: 10
Key:
science-electronics
-Packages: list
- avrdude
- gcc-avr
- gerbv
- uisp
- electric
- geda
- kicad
- freehdl
- iverilog
- verilator
- gplcver
- gputils
- simulpic
- pcb
- oregano
- tkgate
- texlive-latex-extra
- linsmith
- confluence
- gnucap
- qelectrotech
- covered
- arduino
- arduino-core
- visolate
- fritzing
- drawtiming
- geda-xgsch2pcb
- gnusim8085
- gtkwave
- qsapecng
- berkeley-abc
- qrouter
- magic
Task: science-electrophysiology
+Parent: debian-science
Section: debian-science
Description: Debian Science packages for Electrophysiology
This metapackage will install Debian packages which might be useful for
@@ -362,201 +143,66 @@ Description: Debian Science packages for Electrophysiology
science-statistics, science-imageanalysis, science-numericalcomputation,
med-imaging, and med-imaging-dev metapackages for a variety of additional
software that might be useful for electrophysiology research.
-Relevance: 10
Key:
science-electrophysiology
-Packages: list
- libgdf-dev
- sigviewer
- libdrawtk-dev
Task: science-engineering
+Parent: debian-science
Section: debian-science
Description: Debian Science Engineering packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Engineering.
.
- Please not that there is an additional package engineering-dev
+ Please note that there is an additional package engineering-dev
which depends from packages which are useful to develop engineering
related software.
-Relevance: 10
Key:
science-engineering
-Packages: list
- librecad
- sailcut
- oce-draw
- python-silo
- libsilo-bin
- gerris
- gmsh
- pythoncad
- z88
- freecad
- feel++-apps
- python-openturns
- code-aster-gui
- code-aster
- eficas
- code-saturne
- hdfview
- sfc
- cba
- python-fiat
- syrthes
- freefoam
- tetgen
- dime
- cgns-convert
- libadios-bin
Task: science-engineering-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science Engineering-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Engineering.
.
You might also be interested in the science-engineering metapackage.
-Relevance: 10
Key:
science-engineering-dev
-Packages: list
- libalberta2-dev
- code-saturne-bin
- code-saturne-include
- libcgns-dev
- libitpp-dev
- libfreefoam-dev
- libexodusii-dev
- libadios-dev
- libbox-dev
- libsilo-dev
- libxdmf-dev
- libgetfem++-dev
- libhdf5-serial-dev
- libjhdf5-java
- libjhdf4-java
- liboce-visualization-dev
- liboce-ocaf-dev
- libdeal.ii-dev
- libfeel++-dev
- libopenturns-dev
- libmadlib-dev
- libslepc3.4.2-dev
- libug-dev
- libmed-dev
- libmedc-dev
- libmedimport-dev
- libnetcdf-dev
- python-netcdf
- r-cran-rnetcdf
- syfi-dev
- libnfft3-dev
- libnlopt-dev
- libcoin80-dev
- libslicot-dev
- python-collada
- libann-dev
- libflann-dev
- libdime-dev
- libdxflib-dev
Task: science-financial
+Parent: debian-science
Section: debian-science
Description: Debian Science financial engineering and computational finance
This metapackage will install Debian Science packages for financial
engineering and computational finance.
-Relevance: 10
Key:
science-financial
-Packages: list
- r-cran-fasianoptions
- r-cran-fassets
- r-cran-fbasics
- r-cran-fbonds
- r-cran-fcopulae
- r-cran-fexoticoptions
- r-cran-fextremes
- r-cran-fgarch
- r-cran-fimport
- r-cran-fmultivar
- r-cran-foptions
- r-cran-fregression
- r-cran-ftrading
- r-cran-funitroots
- r-cran-timedate
- r-cran-timeseries
- r-cran-fportfolio
Task: science-geography
+Parent: debian-science
Section: debian-science
Description: Debian Science Geography packages
This metapackage will install Debian Science packages related to
Geography. You might also be interested in the field::geography
debtag and, depending on your focus, in the education-geography
metapackage.
-Relevance: 10
Key:
science-geography
-Packages: list
- gis-workstation
- grass
- qgis
- qgis-plugin-grass
- proj-bin
- mapserver-bin
- gmt
- gpsbabel
- gpx2shp
- gpsd
- gpsman
- openscenegraph
- thuban
- gpstrans
- geoip-bin
- gpsd-clients
- grass-doc
- php5-mapscript
- phppgadmin
- gpsmanshp
- viking
- avce00
- e00compr
- gdal-bin
- ogdi-bin
- postgis
- osm2pgsql
- josm
- josm-plugins
- merkaartor
- gosmore
- python-mapnik
- mapnik-utils
- osmpbf-bin
- imposm
- hyantesite
- r-cran-sp
- r-cran-maptools
- r-cran-mapdata
- r-cran-mapproj
- r-cran-maps
- pgadmin3
Task: science-geometry
+Parent: debian-science
Section: debian-science
Description: Debian Science geometry packages
This metapackage will install Debian Science packages related to
geometry. You might also be interested in the field::mathematics
debtag and, depending on your focus, in the education-mathematics
metapackage.
-Relevance: 10
Key:
science-geometry
-Packages: list
- carmetal
- geogebra-kde
Task: science-highenergy-physics
+Parent: debian-science
Section: debian-science
Description: Debian Science High Energy Physics packages
This metapackage will install Debian Science packages related to High Energy
@@ -566,114 +212,11 @@ Description: Debian Science High Energy Physics packages
.
You might also be interested in the debtag field::physics and, depending on
your focus, in the physics and education-physics metapackages.
-Relevance: 10
Key:
science-highenergy-physics
-Packages: list
- cernlib
- cernlib-base
- cernlib-core
- cernlib-extras
- dzedit
- kuipc
- kxterm
- nypatchy
- pawserv
- zftp
- paw
- paw++
- cernlib-montecarlo
- geant321
- feynmf
- looptools
- python-lhapdf
- octave-lhapdf
- root-macro-fastjet
- pythia8-root-interface
- libroot-bindings-python5.34
- libroot-bindings-ruby5.34
- libroot-graf3d-gl5.34
- libroot-io-xmlparser5.34
- libroot-math-mathmore5.34
- libroot-math-unuran5.34
- libroot-misc-memstat5.34
- libroot-misc-table5.34
- libroot-net-bonjour5.34
- libroot-net-ldap5.34
- libroot-roofit5.34
- libroot-geom5.34
- libroot-graf2d-gpad5.34
- libroot-graf2d-graf5.34
- libroot-graf2d-postscript5.34
- libroot-graf3d-eve5.34
- libroot-graf3d-g3d5.34
- libroot-gui5.34
- libroot-gui-ged5.34
- libroot-hist5.34
- libroot-hist-spectrum5.34
- libroot-html5.34
- libroot-io5.34
- libroot-math-foam5.34
- libroot-math-genvector5.34
- libroot-math-mathcore5.34
- libroot-math-matrix5.34
- libroot-math-minuit5.34
- libroot-math-mlp5.34
- libroot-math-physics5.34
- libroot-math-quadp5.34
- libroot-math-smatrix5.34
- libroot-math-splot5.34
- libroot-misc-minicern5.34
- libroot-montecarlo-eg5.34
- libroot-montecarlo-vmc5.34
- libroot-net5.34
- libroot-net-auth5.34
- libroot-proof5.34
- libroot-proof-proofplayer5.34
- libroot-tmva5.34
- libroot-tree5.34
- libroot-tree-treeplayer5.34
- libroot-core5.34
- root-plugin-graf2d-asimage
- root-plugin-geom-gdml
- root-plugin-gui-qt
- root-plugin-graf2d-qt
- root-plugin-math-fftw3
- root-plugin-math-minuit2
- root-plugin-montecarlo-pythia8
- root-plugin-net-globus
- root-plugin-net-krb5
- root-plugin-sql-mysql
- root-plugin-sql-odbc
- root-plugin-sql-pgsql
- root-plugin-geom-geombuilder
- root-plugin-geom-geompainter
- root-plugin-graf2d-x11
- root-plugin-graf3d-x3d
- root-plugin-gui-fitpanel
- root-plugin-gui-guibuilder
- root-plugin-gui-sessionviewer
- root-plugin-hist-hbook
- root-plugin-hist-histpainter
- root-plugin-hist-spectrumpainter
- root-plugin-io-sql
- root-plugin-io-xml
- root-plugin-math-fumili
- root-plugin-tree-treeviewer
- root-system-proofd
- root-system-rootd
- root-system-bin
- root-system-common
- root-system
- rivet
- rivet-plugins
- python-rivet
- rivet-root-converter
- thepeg
- thepeg-gui
- herwig++
Task: science-highenergy-physics-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science High Energy Physics development packages
This metapackage will install Debian Science packages related to development
@@ -683,558 +226,104 @@ Description: Debian Science High Energy Physics development packages
.
You might also be interested in the debtag field::physics and, depending on
your focus, in the physics and education-physics metapackages.
-Relevance: 10
Key:
science-highenergy-physics-dev
-Packages: list
- cernlib-base-dev
- cernlib-core-dev
- libclhep-dev
- libhepmc-dev
- libhepmcfio-dev
- liblhapdf-dev
- libsiscone-dev
- libsiscone-spherical-dev
- libfastjet-dev
- libfastjettools-dev
- libfastjet-fortran-dev
- libfastjetplugins-dev
- libpythia8-dev
- libhepmcinterface8-dev
- fcc
- libooptools-dev
- libroot-bindings-python-dev
- libroot-bindings-ruby-dev
- libroot-graf3d-gl-dev
- libroot-io-xmlparser-dev
- libroot-math-mathmore-dev
- libroot-math-unuran-dev
- libroot-misc-memstat-dev
- libroot-misc-table-dev
- libroot-net-bonjour-dev
- libroot-net-ldap-dev
- libroot-roofit-dev
- libroot-geom-dev
- libroot-graf2d-gpad-dev
- libroot-graf2d-graf-dev
- libroot-graf2d-postscript-dev
- libroot-graf3d-eve-dev
- libroot-graf3d-g3d-dev
- libroot-gui-dev
- libroot-gui-ged-dev
- libroot-hist-dev
- libroot-hist-spectrum-dev
- libroot-html-dev
- libroot-io-dev
- libroot-math-foam-dev
- libroot-math-genvector-dev
- libroot-math-mathcore-dev
- libroot-math-matrix-dev
- libroot-math-minuit-dev
- libroot-math-mlp-dev
- libroot-math-physics-dev
- libroot-math-quadp-dev
- libroot-math-smatrix-dev
- libroot-math-splot-dev
- libroot-misc-minicern-dev
- libroot-montecarlo-eg-dev
- libroot-montecarlo-vmc-dev
- libroot-net-dev
- libroot-net-auth-dev
- libroot-proof-dev
- libroot-proof-proofplayer-dev
- libroot-tmva-dev
- libroot-tree-dev
- libroot-tree-treeplayer-dev
- libroot-core-dev
- libroot-static
- librivet-dev
- rivet-plugins-dev
- libthepeg-dev
- herwig++-dev
Task: science-imageanalysis
+Parent: debian-science
Section: debian-science
Description: Debian Science image analysis packages
This metapackage will install Debian Science packages related to
scientific image acquisition. This might be used in several
sciences (as for instance science-dataacquisition, science-viewing
and science-typesetting).
-Relevance: 10
Key:
science-imageanalysis
-Packages: list
- gpivtools
- gpiv
- libcv-dev
- gwyddion
- teem-apps
+
+Task: science-imageanalysis-dev
+Parent: debian-science
+Section: debian-science
+Description: Debian Science development of image analysis applications
+ This metapackage will install Debian Science development libraries to
+ develop scientific image analysis applications acquisitions.
+Key:
+ science-imageanalysis-dev
Task: science-linguistics
+Parent: debian-science
Section: debian-science
Description: Debian Science Linguistics packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Linguistics.
-Relevance: 10
Key:
science-linguistics
-Packages: list
- wordnet
- apertium
- link-grammar
- artha
- timbl
- timblserver
- mbt
- mbtserver
- ucto
- dimbl
- frog
- collatinus
Task: science-logic
+Parent: debian-science
Section: debian-science
Description: Debian Science Logic packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Computational Logic. It contains
formula transformation tools, solvers for formulas specified in
various logics, interactive proof systems, etc.
-Relevance: 10
Key:
science-logic
-Packages: list
- agda
- coq
- hol-light
- hol88
- matita
- proofgeneral
- depqbf
- picosat
- sat4j
- alt-ergo
- boolector
- cvc3
- prover9
- mace2
- maude
- spass
- coinor-cbc
- minisat+
- clasp
- coala
- gringo
- lbt
- maria
- mona
- otter
Task: science-machine-learning
+Parent: debian-science
Section: debian-science
Description: Debian Science Machine Learning packages
This metapackage will install Debian packages which might be useful for
scientists interested in machine learning. Included packages range
from knowledge-based (expert) inference systems to software
implementing dominant nowadays statistical methods.
-Relevance: 10
Key:
science-machine-learning
-Packages: list
- python-pyke
- gprolog
- yap
- libtorch3-dev
- libshogun-dev
- libfann-dev
- libsvm-dev
- liblinear-dev
- libocas-dev
- python-scikits-learn
- python-mdp
- python-mlpy
- weka
- vowpal-wabbit
- r-cran-mass
- r-cran-bayesm
- r-cran-class
- r-cran-cluster
- r-cran-msm
- r-cran-mcmcpack
- r-cran-mnp
- r-cran-amore
- r-cran-gbm
- r-cran-tgp
- python-mvpa2
- python-statsmodels
- root-system
- libroot-tmva-dev
- libroot-montecarlo-vmc-dev
- libroot-math-mlp-dev
- autoclass
- mcl
- scilab-ann
- libga-dev
- libevocosm-dev
- pgapack
- python-genetic
- octave-ga
- python-pyevolve
- lush
- libcv-dev
- python-opencv
- libvigraimpex-dev
- python-vigra
- python-pebl
- python-pymc
Task: science-mathematics
+Parent: debian-science
Section: debian-science
Description: Debian Science Mathematics packages
This metapackage will install Debian Science packages related to
Mathematics. You might also be interested in the field::mathematics
debtag and, depending on your focus, in the education-mathematics
metapackage.
-Relevance: 10
Key:
science-mathematics
-Packages: list
- axiom
- ginac-tools
- xmaxima
- wxmaxima
- pari-gp
- gap
- gap-small-groups-extra
- gap-trans-groups
- gap-prim-groups
- gap-small-groups
- gap-table-of-marks
- gap-guava
- gap-character-tables
- gap-float
- gerris
- freefem
- freefem3d
- freefem++
- gmsh
- coq
- proofgeneral
- matita
- agda
- prover9
- hol-light
- minisat
- science-statistics
- ess
- littler
- r-recommended
- rkward
- r-cran-mapproj
- r-cran-abind
- r-cran-bayesm
- r-cran-boot
- r-cran-cairodevice
- r-cran-car
- r-cran-chron
- r-cran-cluster
- r-cran-coda
- r-cran-codetools
- r-cran-date
- r-cran-dbi
- r-cran-rms
- r-cran-eco
- r-cran-effects
- r-cran-fbasics
- r-cran-fcopulae
- r-cran-fextremes
- r-cran-fmultivar
- r-cran-foptions
- r-cran-foreign
- r-cran-fportfolio
- r-cran-timedate
- r-cran-gdata
- r-cran-gmodels
- r-cran-gplots
- r-cran-gregmisc
- r-cran-gtools
- r-cran-hdf5
- r-cran-hmisc
- r-cran-its
- r-cran-kernsmooth
- r-cran-lattice
- r-cran-latticeextra
- r-cran-lhs
- r-cran-lme4
- r-cran-lmtest
- r-cran-mapdata
- r-cran-maps
- r-cran-matchit
- r-cran-matrix
- r-cran-mcmcpack
- r-cran-mgcv
- r-cran-misc3d
- r-cran-mnp
- r-cran-multcomp
- r-cran-mvtnorm
- r-cran-nlme
- r-cran-pscl
- r-cran-psy
- r-cran-qtl
- r-cran-quadprog
- r-cran-rcmdr
- r-cran-relimp
- r-cran-rgl
- r-cran-rgtk2
- r-cran-rmpi
- r-cran-rmysql
- r-cran-rodbc
- r-cran-rpart
- r-cran-rquantlib
- r-cran-rserve
- r-cran-rsprng
- r-cran-sandwich
- r-cran-sm
- r-cran-snow
- r-cran-strucchange
- r-cran-survival
- r-cran-tkrplot
- r-cran-tseries
- r-cran-vgam
- r-cran-mass
- r-cran-xml
- r-cran-zelig
- r-cran-zoo
- r-cran-msm
- r-cran-amore
- r-cran-teachingdemos
- r-cran-expm
- psignifit
- python-scipy
- r-cran-vcd
- r-cran-permute
- python-statsmodels
- r-cran-spatstat
- r-cran-deldir
- r-cran-fastcluster
- r-cran-statmod
- python-openturns
- python-pandas
- r-cran-ecodist
- r-cran-energy
- r-cran-mvnormtest
- r-cran-acepack
- geomview
- octave
- xmds
- xmds2
- freemat
- mathomatic
- scilab
- scilab-ann
- regina-normal
- snappea
- lp-solve
- libmatheval1
- mumps-test
- geogebra
- lrslib
- dolfin-bin
- fenics
- sfc
- python-ffc
- polylib-utils
- rheolef
- scotch
- bliss
- qtoctave
- python-deap
- mcl
- polybori-gui
- polybori
- sagemath-database-conway-polynomials
- eclib-tools
- julia
- qhull-bin
- python-minieigen
- coinor-symphony
- tetgen
- feel++-apps
Task: science-mathematics-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science Mathematics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
.
You might also be interested in the science-mathematics metapackage.
-Relevance: 10
Key:
science-mathematics-dev
-Packages: list
- python-numpy
- python-numexpr
- libgsl0-dev
- liblapack-dev
- libatlas-base-dev
- libblas-dev
- libopenblas-dev
- libsuperlu-dev
- libglpk-dev
- libglpk-java
- libcgal-dev
- libqhull-dev
- libmatheval-dev
- python-openopt
- libmatio-dev
- libblitz0-dev
- libjama-dev
- libtnt-dev
- liblip-dev
- libranlip-dev
- libarpack2-dev
- libarpack++2-dev
- code-saturne-bin
- code-saturne-include
- libarmadillo-dev
- libstxxl-dev
- libnewmat10-dev
- libmadlib-dev
- python-dolfin
- libslepc3.4.2-dev
- petsc-dev
- python-openturns
- libopenturns-dev
- libqd-dev
- libcqrlib2-dev
- libcvector2-dev
- libhypre-dev
- libitsol-dev
- libmuparser-dev
- libsparskit-dev
- libspooles-dev
- libsuitesparse-dev
- ufc
- python-ufc
- python-ffc
- python-ufl
- libscythestat-dev
- libfreefem++-dev
- libfreefem-dev
- libgivaro-dev
- fflas-ffpack
- libpolybori-dev
- libpolybori-groebner-dev
- python-polybori
- libquadrule-dev
- libcdd-dev
- gap-dev
- libnfft3-dev
- libfftw3-dev
- fftw-dev
- sfftw-dev
- liblbfgs-dev
- libdogleg-dev
- libigraph0-dev
- libalglib-dev
- libeigen3-dev
- libviennacl-dev
- python-pyviennacl
- python3-pyviennacl
- libgnuplot-iostream-dev
- libqcustomplot-dev
- libcneartree-dev
- libmpfrc++-dev
- libscscp1-dev
- python-linop
- libcminpack-dev
- minpack-dev
- libeinspline-dev
- libdune-grid-dev
- libann-dev
- libflann-dev
- libdouble-conversion-dev
- libfeel++-dev
- python-ferari
- libug-dev
Task: science-meteorology
+Parent: debian-science
Section: debian-science
Description: Debian Science Meteorology packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Meteorology and Climate.
-Relevance: 10
Key:
science-meteorology
-Packages: list
- cdo
- nco
- dballe
- zygrib
- ncview
- grads
- ferret-vis
- magics++
- freefoam
- libgrib-api-tools
- ecaccess
- python-netcdf
- python-grib
- python-drslib
- python-cmor
- python-sphere
- cmip5-cmor-tables
- aweather
- libdap-bin
- libdap-doc
- vistrails
Task: science-meteorology-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science Meteorology-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Meteorology and Climate.
.
You might also be interested in the science-meteorology metapackage.
-Relevance: 10
Key:
science-meteorology-dev
-Packages: list
- libemos-dev
- libgadap-dev
- libcmor-dev
- libgrib-api-dev
- libgrib-api-tools
- libgrib2c-dev
- libhe5-hdfeos-dev
- libhdfeos-dev
- libproj-dev
- libgctp-dev
- libnetcdf-dev
- netcdf-bin
- r-cran-rnetcdf
- liblapack-dev
- libblas-dev
- libfftw3-dev
- fftw-dev
- sfftw-dev
- libblas-doc
- liblapack-doc
- libfftw3-doc
- liblas-dev
- libsphere-dev
- libterralib-dev
- liboasis3-dev
- libudunits2-dev
- libdap-dev
- python-openturns
- libopenturns-dev
- wcslib-dev
- wcslib-doc
- libfreefoam-dev
- librsl-dev
- libwreport-dev
Task: science-nanoscale-physics
+Parent: debian-science
Section: debian-science
Description: Debian Science Nanoscale Physics packages
This metapackage will install Debian Science packages related to
@@ -1254,94 +343,11 @@ Description: Debian Science Nanoscale Physics packages
.
You might also be interested in the debtag field::physics and, depending on
your focus, in the physics and education-physics metapackages.
-Relevance: 10
Key:
science-nanoscale-physics
-Packages: list
- abinit
- mpqc
- openmx
- psi3
- quantum-espresso
- drawxtl
- etsf-io
- feynmf
- fityk
- gnuplot
- grace
- libblas3
- liblapack3
- libfftw3-3
- libgsl0ldbl
- gsl-bin
- netcdf-bin
- netcdf-doc
- nco
- ncview
- openmpi-bin
- science-numericalcomputation
- octave
- python-matplotlib
- python-scipy
- ipython
- python-numpy
- spyder
- python-guiqwt
- pdl
- gnudatalanguage
- scilab
- scilab-ann
- freemat
- yorick
- r-base
- qtoctave
- lush
- yade
- liggghts
- esys-particle
- python-scitools
- python-deap
- python-lmfit
- python-tables
- vitables
- lammps
- julia
- admesh
- metis
- python-gts
- python-demgengeo
- coinor-symphony
- coinor-clp
- libsuitesparse-dev
- libdune-grid-dev
- libcolpack-dev
- libadolc-dev
- python-csa
- algotutor
- avogadro
- garlic
- gdis
- gwyddion
- cp2k
- pymca
- cbflib-bin
- axiom
- maxima
- cadabra
- ggobi
- mayavi2
- udav
- extrema
- gperiodic
- python-elemental
- graphviz
- libblacs-mpi1
- libscalapack-mpi1
- python-scientific
- python-sympy
- pyxplot
Task: science-nanoscale-physics-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science Nanoscale Physics development packages
This metapackage will install Debian Science packages which might be
@@ -1350,123 +356,11 @@ Description: Debian Science Nanoscale Physics development packages
You might also be interested in the debtag field::physics and, depending
on your focus, in the nanoscale-physics, physics and education-physics
metapackages.
-Relevance: 10
Key:
science-nanoscale-physics-dev
-Packages: list
- abinit-doc
- libblas-dev
- libblas-doc
- liblapack-dev
- liblapack-doc
- libetsf-io-dev
- libetsf-io-doc
- libfftw3-dev
- fftw-dev
- sfftw-dev
- libgsl0-dev
- gsl-bin
- libnetcdf-dev
- netcdf-doc
- r-cran-rnetcdf
- libxc-dev
- libopenmpi-dev
- liboce-visualization-dev
- liboce-ocaf-dev
- root-system
- libroot-tmva-dev
- libroot-montecarlo-vmc-dev
- libroot-math-mlp-dev
- python-fabio
- libcbf-dev
- pyfai
- libssm-dev
- gsl-doc-pdf
- libblacs-mpi-dev
- libscalapack-mpi-dev
- scalapack-doc
- science-mathematics-dev
- python-numpy
- python-numexpr
- libatlas-base-dev
- libopenblas-dev
- libsuperlu-dev
- libglpk-dev
- libglpk-java
- libcgal-dev
- libqhull-dev
- libmatheval-dev
- python-openopt
- libmatio-dev
- libblitz0-dev
- libjama-dev
- libtnt-dev
- liblip-dev
- libranlip-dev
- libarpack2-dev
- libarpack++2-dev
- code-saturne-bin
- code-saturne-include
- libarmadillo-dev
- libstxxl-dev
- libnewmat10-dev
- libmadlib-dev
- python-dolfin
- libslepc3.4.2-dev
- petsc-dev
- python-openturns
- libopenturns-dev
- libqd-dev
- libcqrlib2-dev
- libcvector2-dev
- libhypre-dev
- libitsol-dev
- libmuparser-dev
- libsparskit-dev
- libspooles-dev
- libsuitesparse-dev
- ufc
- python-ufc
- python-ffc
- python-ufl
- libscythestat-dev
- libfreefem++-dev
- libfreefem-dev
- libgivaro-dev
- fflas-ffpack
- libpolybori-dev
- libpolybori-groebner-dev
- python-polybori
- libquadrule-dev
- libcdd-dev
- gap-dev
- libnfft3-dev
- liblbfgs-dev
- libdogleg-dev
- libigraph0-dev
- libalglib-dev
- libeigen3-dev
- libviennacl-dev
- python-pyviennacl
- python3-pyviennacl
- libgnuplot-iostream-dev
- libqcustomplot-dev
- libcneartree-dev
- libmpfrc++-dev
- libscscp1-dev
- python-linop
- libcminpack-dev
- minpack-dev
- libeinspline-dev
- libdune-grid-dev
- libann-dev
- libflann-dev
- libdouble-conversion-dev
- libfeel++-dev
- python-ferari
- libug-dev
Task: science-neuroscience-cognitive
+Parent: debian-science
Section: debian-science
Description: Debian Science packages for Cognitive Neuroscience
This metapackage will install Debian packages which might be useful for
@@ -1480,36 +374,11 @@ Description: Debian Science packages for Cognitive Neuroscience
science-imageanalysis, science-numericalcomputation, med-imaging, and
med-imaging-dev metapackages for a variety of additional software that
might be useful in the context of cognitive neuroscience.
-Relevance: 10
Key:
science-neuroscience-cognitive
-Packages: list
- psignifit
- amide
- dicomnifti
- minc-tools
- medcon
- xmedcon
- nifti-bin
- python-nibabel
- python-dicom
- fslview
- python-mvpa2
- python-nitime
- python-dipy
- caret
- python-pyepl
- praat
- dicom3tools
- voxbo
- mricron
- itksnap
- python-pypsignifit
- python-statsmodels
- mriconvert
- python-pyxnat
Task: science-neuroscience-modeling
+Parent: debian-science
Section: debian-science
Description: Debian Science packages for modeling of neural systems
This metapackage will install Debian packages which might be useful for
@@ -1522,14 +391,11 @@ Description: Debian Science packages for modeling of neural systems
science-numericalcomputation, med-imaging, and med-imaging-dev
metapackages for a variety of additional software that might be
useful for neuroscience research.
-Relevance: 10
Key:
science-neuroscience-modeling
-Packages: list
- python-brian
- cnrun
Task: science-numericalcomputation
+Parent: debian-science
Section: debian-science
Description: Debian Science Numerical Computation packages
This metapackage will install Debian Science packages useful for
@@ -1537,201 +403,41 @@ Description: Debian Science Numerical Computation packages
calculation and visualisation system for scientific computing and
data analysis. These packages are similar to commercial systems such
as Matlab and IDL.
-Relevance: 10
Key:
science-numericalcomputation
-Packages: list
- octave
- python-matplotlib
- python-scipy
- ipython
- python-numpy
- spyder
- python-guiqwt
- pdl
- gnudatalanguage
- scilab
- scilab-ann
- freemat
- yorick
- r-base
- qtoctave
- lush
- yade
- liggghts
- esys-particle
- python-scitools
- python-deap
- python-lmfit
- python-tables
- vitables
- lammps
- julia
- admesh
- metis
- python-gts
- python-demgengeo
- coinor-symphony
- coinor-clp
- libsuitesparse-dev
- libdune-grid-dev
- libcolpack-dev
- libadolc-dev
- python-csa
- algotutor
Task: science-physics
+Parent: debian-science
Section: debian-science
Description: Debian Science Physics packages
This metapackage will install Debian Science packages related to Physics.
You might also be interested in the debtag field::physics and, depending on
your focus, in education-physics metapackage.
-Relevance: 10
Key:
science-physics
-Packages: list
- cernlib
- geant321
- paw++
- paw
- abinit
- gerris
- feynmf
- freefoam
- fityk
- tessa
- science-numericalcomputation
- octave
- python-matplotlib
- python-scipy
- ipython
- python-numpy
- spyder
- python-guiqwt
- pdl
- gnudatalanguage
- scilab
- scilab-ann
- freemat
- yorick
- r-base
- qtoctave
- lush
- yade
- liggghts
- esys-particle
- python-scitools
- python-deap
- python-lmfit
- python-tables
- vitables
- lammps
- julia
- admesh
- metis
- python-gts
- python-demgengeo
- coinor-symphony
- coinor-clp
- libsuitesparse-dev
- libdune-grid-dev
- libcolpack-dev
- libadolc-dev
- python-csa
- algotutor
- oce-draw
- science-electronics
- avrdude
- gcc-avr
- gerbv
- uisp
- electric
- geda
- kicad
- freehdl
- iverilog
- verilator
- gplcver
- gputils
- simulpic
- pcb
- oregano
- tkgate
- texlive-latex-extra
- linsmith
- confluence
- gnucap
- qelectrotech
- covered
- arduino
- arduino-core
- visolate
- fritzing
- drawtiming
- geda-xgsch2pcb
- gnusim8085
- gtkwave
- qsapecng
- berkeley-abc
- qrouter
- magic
- gpiv
- gpivtools
- maxima
- python-sympy
- axiom
- meshlab
- cadabra
- drawxtl
- opticalraytracer
- ghkl
- etsf-io
- pymca
- quantum-espresso
- gwyddion
- cp2k
- root-system
- libroot-tmva-dev
- libroot-montecarlo-vmc-dev
- libroot-math-mlp-dev
Task: science-physics-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science Physics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
.
You might also be interested in the science-physics metapackage.
-Relevance: 10
Key:
science-physics-dev
-Packages: list
- libfreefoam-dev
- pyfai
- libnfft3-dev
- libfftw3-dev
- fftw-dev
- sfftw-dev
- libopenctm-dev
- python-openctm
- python-quantities
- python-multipletau
- libfeel++-dev
Task: science-presentation
+Parent: debian-science
Section: debian-science
Description: Debian Science generic tools for presentations
This metapackage will install Debian Science some packages which are
useful for doing presentations for instance on scientific conferences.
-Relevance: 10
Key:
science-presentation
-Packages: list
- latex-beamer
- pdf-presenter-console
- zathura
Task: science-psychophysics
+Parent: debian-science
Section: debian-science
Description: Debian Science packages for Psychophysics
This metapackage will install Debian packages which might be useful for
@@ -1744,90 +450,50 @@ Description: Debian Science packages for Psychophysics
domain of application. Additionally look into
science-bci since those often provide a complete loop
frameworks including stimuli delivery.
-Relevance: 10
Key:
science-psychophysics
-Packages: list
- python-pyoptical
- python-pyepl
- libfreenect-dev
- octave-psychtoolbox-3
Task: science-robotics
+Parent: debian-science
Section: debian-science
Description: Debian Robotics packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Robotics.
.
You might also be interested in the science-engineering metapackage.
-Relevance: 10
Key:
science-robotics
-Packages: list
- xenomai-runtime
- morse-simulator
- choreonoid
- liburdfdom-tools
- octomap-tools
- octovis
Task: science-robotics-dev
+Parent: debian-science
Section: debian-science
Description: Debian Robotics development packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages that are relevant to develop applications
for robotics.
-Relevance: 10
Key:
science-robotics-dev
-Packages: list
- libcv-dev
- libroboptim-core-dev
- libvisp-dev
- libcnoid-dev
- libode-dev
- libompl-dev
- liboctomap-dev
- libopenigtlink-dev
- liburdfdom-dev
- liburdfdom-headers-dev
- libslicot-dev
- libsdformat-dev
- libconsole-bridge-dev
- libcomedi-dev
- python-comedilib
- libccd-dev
Task: science-simulations
+Parent: debian-science
Section: debian-science
Description: Debian Science Simulation packages
This metapackage will install Debian Science packages that are
used to do simulations in different fields of science.
-Relevance: 10
Key:
science-simulations
-Packages: list
- sumo
- esys-particle
- lammps
- liggghts
- yade
- python-deap
- freefoam
- music-bin
Task: science-social
+Parent: debian-science
Section: debian-science
Description: Debian Science social sciences packages
This metapackage will install Debian Science packages useful for social
sciences.
-Relevance: 10
Key:
science-social
-Packages: list
- opensesame
Task: science-statistics
+Parent: debian-science
Section: debian-science
Description: Debian Science Statistics packages
This metapackage is part of the Debian Pure Blend "Debian Science"
@@ -1836,110 +502,11 @@ Description: Debian Science Statistics packages
a lot of R packages as well as from other tools which are useful to
do statistics. Moreover the Science Mathematics task is suggested
to optionally install all mathematics related software.
-Relevance: 10
Key:
science-statistics
-Packages: list
- ess
- littler
- r-recommended
- rkward
- r-cran-mapproj
- r-cran-abind
- r-cran-bayesm
- r-cran-boot
- r-cran-cairodevice
- r-cran-car
- r-cran-chron
- r-cran-cluster
- r-cran-coda
- r-cran-codetools
- r-cran-date
- r-cran-dbi
- r-cran-rms
- r-cran-eco
- r-cran-effects
- r-cran-fbasics
- r-cran-fcopulae
- r-cran-fextremes
- r-cran-fmultivar
- r-cran-foptions
- r-cran-foreign
- r-cran-fportfolio
- r-cran-timedate
- r-cran-gdata
- r-cran-gmodels
- r-cran-gplots
- r-cran-gregmisc
- r-cran-gtools
- r-cran-hdf5
- r-cran-hmisc
- r-cran-its
- r-cran-kernsmooth
- r-cran-lattice
- r-cran-latticeextra
- r-cran-lhs
- r-cran-lme4
- r-cran-lmtest
- r-cran-mapdata
- r-cran-maps
- r-cran-matchit
- r-cran-matrix
- r-cran-mcmcpack
- r-cran-mgcv
- r-cran-misc3d
- r-cran-mnp
- r-cran-multcomp
- r-cran-mvtnorm
- r-cran-nlme
- r-cran-pscl
- r-cran-psy
- r-cran-qtl
- r-cran-quadprog
- r-cran-rcmdr
- r-cran-relimp
- r-cran-rgl
- r-cran-rgtk2
- r-cran-rmpi
- r-cran-rmysql
- r-cran-rodbc
- r-cran-rpart
- r-cran-rquantlib
- r-cran-rserve
- r-cran-rsprng
- r-cran-sandwich
- r-cran-sm
- r-cran-snow
- r-cran-strucchange
- r-cran-survival
- r-cran-tkrplot
- r-cran-tseries
- r-cran-vgam
- r-cran-mass
- r-cran-xml
- r-cran-zelig
- r-cran-zoo
- r-cran-msm
- r-cran-amore
- r-cran-teachingdemos
- r-cran-expm
- psignifit
- python-scipy
- r-cran-vcd
- r-cran-permute
- python-statsmodels
- r-cran-spatstat
- r-cran-deldir
- r-cran-fastcluster
- r-cran-statmod
- python-openturns
- python-pandas
- r-cran-ecodist
- r-cran-energy
- r-cran-mvnormtest
- r-cran-acepack
Task: science-tools
+Parent: debian-science
Section: debian-science
Description: Debian Science generic tools for scientific work
This task lists Debian Science some packages which are providing some
@@ -1947,140 +514,33 @@ Description: Debian Science generic tools for scientific work
.
Note that there is no according metapackage created since the packages
might be to different to make sense to install all on one machine.
-Relevance: 10
-Packages: list
- pegasus-wms
- xoscope
Task: science-typesetting
+Parent: debian-science
Section: debian-science
Description: Debian Science typesetting packages
This metapackage will install Debian Science packages related to
typesetting. You might also be interested in the use::typesetting
debtag.
-Relevance: 10
Key:
science-typesetting
-Packages: list
- referencer
- kbibtex
- impose+
- pybliographer
- texlive-bibtex-extra
- jabref
- bibutils
- biber
- feynmf
- texlive
- texlive-science
- texlive-publishers
- texlive-math-extra
- diploma
- lyx
- auctex
- xfig
- transfig
- dia
- bibus
- mlpost
- latexdiff
- libjlatexmath-java
- cb2bib
- jeuclid-mathviewer
- sketch
- ipe
- ipe5toxml
- zotero-standalone
Task: science-viewing
+Parent: debian-science
Section: debian-science
Description: Debian Science data visualisation packages
This metapackage will install Debian Science packages related to data
visualization. You might also be interested in the use::viewing
debtag.
-Relevance: 10
Key:
science-viewing
-Packages: list
- vistrails
- pdl
- gnudatalanguage
- kst
- ifrit
- yorick
- python-scientific
- fityk
- gnuplot
- grace
- gri
- graphviz
- pyxplot
- plotdrop
- qtiplot
- python-guiqwt
- imview
- mayavi2
- g3data
- gwyddion
- paraview
- gle-graphics
- gmsh
- lybniz
- 3depict
- mathgl
- udav
- python-viper
- matlab2tikz
- feedgnuplot
- libgnuplot-iostream-dev
- libqglviewer2
- python-gnuplot
- ovito
- veusz
- ctioga2
- python-seaborn
- trend
- python-pyqtgraph
Task: science-viewing-dev
+Parent: debian-science
Section: debian-science
Description: Debian Science development of visualisation applications
This metapackage will install Debian Science packages related to the
development of applications to visualise scientific data.
-Relevance: 10
Key:
science-viewing-dev
-Packages: list
- pdl
- gnudatalanguage
- python-scientific
- libgrits-dev
- python-matplotlib
- python-scitools
- libgnuplot-iostream-dev
- libqglviewer-dev
- python-gnuplot
- libcoin80-dev
- libsoqt4-dev
- libvtk5-dev
- libvtk5-qt4-dev
- tcl-vtk
- python-vtk
- libvtk-java
- vtk-examples
- libvtk6-dev
- python-vtk6
- python-pivy
- libgtkdataboxmm-dev
- libgtkdatabox-0.9.2-0-dev
- libeinspline-dev
- inventor-dev
- libqtexengine-dev
- libqwtplot3d-qt4-dev
- python-qwt3d-qt4
- libchealpix-dev
- python3-skimage
- python3-skimage-lib
- libplplot-dev
- python-plplot-qt
diff --git a/debian/control b/debian/control
index 6e936fa..da55557 100644
--- a/debian/control
+++ b/debian/control
@@ -4,7 +4,8 @@ Section: science
Priority: extra
Maintainer: Debian Science Team <debian-science-maintainers at lists.alioth.debian.org>
Uploaders: Frederic Daniel Luc Lehobey <Frederic at Lehobey.net>,
- Andreas Tille <tille at debian.org>
+ Andreas Tille <tille at debian.org>,
+ Sylvestre Ledru <sylvestre at debian.org>
Build-Depends-Indep: blends-dev (>= 0.6.15)
Standards-Version: 3.9.6
Vcs-Browser: https://anonscm.debian.org/cgit/blends/projects/science.git
@@ -78,10 +79,13 @@ Description: Debian Science Project config package
This are metapackages for common utilities for all sciences:
.
* science-imageanalysis packages related to image analysis
+ * science-imageanalysis-dev packages related to image analysis
+ development
* science-numericalcomputation packages related to numerical
computation
* science-presentation packages related to presentation
* science-statistics packages related to statistics
+ * science-tools packages containing misc tools useful in science
* science-typesetting packages related to typesetting
* science-viewing packages related to viewing
* science-viewing packages related to viewing
@@ -94,120 +98,75 @@ Description: Debian Science Project config package
Debian.
+Package: science-all
+Section: metapackages
+Architecture: all
+Recommends: science-astronomy,
+ science-astronomy-dev,
+ science-biology,
+ science-chemistry,
+ science-dataacquisition,
+ science-dataacquisition-dev,
+ science-distributedcomputing,
+ science-economics,
+ science-electronics,
+ science-electrophysiology,
+ science-engineering,
+ science-engineering-dev,
+ science-financial,
+ science-geography,
+ science-geometry,
+ science-highenergy-physics,
+ science-highenergy-physics-dev,
+ science-imageanalysis,
+ science-imageanalysis-dev,
+ science-linguistics,
+ science-logic,
+ science-machine-learning,
+ science-mathematics,
+ science-mathematics-dev,
+ science-meteorology,
+ science-meteorology-dev,
+ science-nanoscale-physics,
+ science-nanoscale-physics-dev,
+ science-neuroscience-cognitive,
+ science-neuroscience-modeling,
+ science-numericalcomputation,
+ science-physics,
+ science-physics-dev,
+ science-presentation,
+ science-psychophysics,
+ science-robotics,
+ science-robotics-dev,
+ science-simulations,
+ science-social,
+ science-statistics,
+ science-typesetting,
+ science-viewing,
+ science-viewing-dev
+Description: Default selection of tasks for Debian Science
+ This package is part of the Debian Science Pure Blend and installs all
+ tasks for a default installation of this blend.
+
Package: science-astronomy
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: astronomical-almanac,
- boinc-app-seti,
- eso-midas,
- esorex,
- fitscheck,
- fitsverify,
- ftools-fv,
- funtools,
- gcx,
- gpredict,
- gyoto,
- lightspeed,
- lynkeos.app,
- openuniverse,
- predict,
- python-astropy,
- python-cpl,
- python-pyfits,
- python-pywcs,
- python3-astropy,
- qfits-tools,
- saods9,
- savi,
- sextractor,
- skycat,
- splash,
- stardata-common,
- stellarium,
- wcslib-tools,
- wcstools,
- wxastrocapture,
- xpa-tools,
- xplanet,
- yorick-full
-Suggests: astroml,
- astroquery,
- audela,
- boinc-app-milkyway,
- casacore-tools,
- cpl-plugin-amber,
- cpl-plugin-fors,
- cpl-plugin-giraf,
- gliese,
- iraf,
- linoccult,
- orbfit,
- pdl,
- pgplot5,
- python-healpy,
- python-pyraf,
- python-scientific,
- scilab-celestlab,
- scilab-overload,
- scilab-scimysql,
- seesat5,
- sncosmo,
- spacechart,
- ssystem,
- stars,
- sunclock,
- worldwind,
- x11iraf,
- xephem,
- xorsa,
- xtide,
- xtide-data,
- yale,
- yorick-cubeview,
- yorick-mira,
- yorick-spydr,
- yorick-yao
-Description: Debian Science Astronomy packages
- This metapackage will install Debian Science packages related to
- Astronomy. You might also be interested in field::astronomy debtag
- and, depending on your focus, in the education-astronomy metapackage.
+Recommends: astro-catalogs
+Description: Debian Science Astronomy transitional package
+ Debian-Astro is now a separate Debian Pure Blend and allows a fine-grained
+ control on the topics to install. To ease the transition, this package will
+ install all user related tasks from Debian-Astro.
Package: science-astronomy-dev
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: libastro-fits-cfitsio-perl,
- libccfits-dev,
- libcfitsio3-dev,
- libchealpix-dev,
- libcpl-dev,
- liberfa-dev,
- libfits-java,
- libnova-dev,
- libqfits-dev,
- libstarlink-ast-dev,
- libstarlink-pal-dev,
- libwcstools-dev,
- python-cpl,
- python-pyfits,
- python-pywcs,
- slang-cfitsio,
- tcl-fitstcl,
- wcslib-dev
-Suggests: casacore-dev,
- libgyoto1-dev,
- libhealipx-cxx-dev,
- libivoafits-java,
- libworldwind-java,
- python-astropy-legacy,
- python-healpy
-Description: Debian Science Astronomy-dev packages
- This metapackage will install Debian Science packages which might be
- helpful for development of applications for Astronomy.
- .
- You might also be interested in the science-astronomy metapackage.
+Recommends: astro-development
+Description: Debian Science Astronomy-dev transitional package
+ Debian-Astro is now a separate Debian Pure Blend and allows a fine-grained
+ control on the topics to install. To ease the transition, this package will
+ install all development related tasks from Debian-Astro.
Package: science-biology
Section: metapackages
@@ -259,6 +218,7 @@ Recommends: adun.app,
gdis,
gdpc,
gelemental,
+ ghemical,
gperiodic,
gromacs | gromacs-mpich | gromacs-openmpi,
jmol,
@@ -282,21 +242,20 @@ Recommends: adun.app,
qutemol,
rasmol,
tandem-mass,
+ v-sim,
viewmol,
xbs,
xdrawchem,
xmakemol-gl | xmakemol
Suggests: fdmnes,
gdpc-examples,
- ghemical,
libegad,
libint,
molden,
molekel,
openchrom,
python-mzml-doc,
- tinker,
- v-sim
+ tinker
Description: Debian Science Chemistry packages
This metapackage will install Debian Science packages related to
Chemistry. You might also be interested in the field::chemistry
@@ -362,25 +321,26 @@ Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version
Recommends: dmtcp,
environment-modules,
globus-core,
+ gridengine-client,
+ gridengine-exec,
+ gridengine-master,
+ gridengine-qmon,
htcondor,
ipython,
mpich,
mpich2python,
openmpi-bin,
openmpipython,
- python-mpi
+ python-mpi,
+ python-scoop,
+ torque-common,
+ torque-server
Suggests: coop-computing-tools,
- gridengine-client,
- gridengine-exec,
- gridengine-master,
- gridengine-qmon,
hpcc,
nordugrid-arc-nox,
octave-mpi,
psom,
- python-mpi4py,
- torque-common,
- torque-server
+ python-mpi4py
Description: Debian Science Distributed Computing packages
This metapackage will install Debian Science packages useful for
various types of distributed computing, such as grid-, cloud-, cluster-
@@ -411,13 +371,13 @@ Recommends: dynare,
python-scitools,
python-simpy,
python-statsmodels,
- qtoctave,
r-base,
r-cran-bayesm,
r-cran-boot,
r-cran-coda,
r-cran-fbonds,
r-cran-fimport,
+ r-cran-fnonlinear,
r-cran-foreign,
r-cran-funitroots,
r-cran-hmisc,
@@ -430,6 +390,7 @@ Recommends: dynare,
r-cran-pwt,
r-cran-pwt8,
r-cran-quadprog,
+ r-cran-rsdmx,
r-cran-tseries,
r-cran-urca,
r-cran-wdi,
@@ -439,13 +400,21 @@ Suggests: dolo,
dynare-matlab,
ess,
matlab-support,
+ minsky,
python-econpy,
- r-cran-fnonlinear,
+ python-quantecon,
+ r-cran-ecdat,
+ r-cran-vars,
+ r-other-bmr,
+ r-other-gecon,
+ recs,
science-mathematics,
science-numericalcomputation,
+ science-social,
science-statistics,
science-typesetting,
- science-viewing
+ science-viewing,
+ x13-arima-seats
Description: Debian Science Economics packages
This metapackage will install Debian Science packages useful for economics and
econometrics. It includes user-friendly programs for simulating and estimating
@@ -458,7 +427,8 @@ Package: science-electronics
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: arduino,
+Recommends: arachne-pnr,
+ arduino,
arduino-core,
avrdude,
berkeley-abc,
@@ -466,6 +436,7 @@ Recommends: arduino,
covered,
drawtiming,
electric,
+ fpga-icestorm,
freehdl,
fritzing,
gcc-avr,
@@ -476,7 +447,10 @@ Recommends: arduino,
gnusim8085,
gplcver,
gputils,
+ graywolf,
+ gspiceui,
gtkwave,
+ gwave,
iverilog,
kicad,
linsmith,
@@ -484,6 +458,7 @@ Recommends: arduino,
oregano,
pcb,
qelectrotech,
+ qflow,
qrouter,
qsapecng,
simulpic,
@@ -491,14 +466,13 @@ Recommends: arduino,
tkgate,
uisp,
verilator,
- visolate
+ visolate,
+ yosys
Suggests: easyspice,
geda-doc,
geda-examples,
geda-gaf,
ghdl,
- gspiceui,
- gwave,
herb,
kicad-doc-de,
kicad-doc-en,
@@ -511,12 +485,10 @@ Suggests: easyspice,
ksimus,
libfeel++-dev,
ngspice,
- qflow,
qucs,
vbpp,
vbs,
- xsmc-calc,
- yosys
+ xsmc-calc
Description: Debian Science Electronics packages
This metapackage will install Debian Science packages related to
Electronics. You might also be interested in the field::electronics
@@ -527,8 +499,7 @@ Package: science-electrophysiology
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: libdrawtk-dev,
- libgdf-dev,
+Recommends: libgdf-dev,
sigviewer
Suggests: aghermann,
bluespike,
@@ -537,6 +508,7 @@ Suggests: aghermann,
eegview,
klustakwik,
libbiosig-dev,
+ libdrawtk-dev,
libeegdev-dev,
libmcpanel-dev,
librtfilter-dev,
@@ -575,22 +547,26 @@ Package: science-engineering
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: cba,
+Recommends: calculix-ccx,
+ cba,
cgns-convert,
code-aster,
code-aster-gui,
code-saturne,
+ diet-agent,
dime,
eficas,
feel++-apps,
freecad,
freefoam,
gerris,
+ getdp,
gmsh,
hdfview,
libadios-bin,
librecad,
libsilo-bin,
+ netgen,
oce-draw,
python-fiat,
python-openturns,
@@ -604,13 +580,10 @@ Recommends: cba,
Suggests: ann-tools,
avl,
brlcad,
- diet-agent,
ecs,
- getdp,
logcentral,
logcentral-tools,
metis-edf,
- netgen,
pycgns,
r-cran-spc,
salome-gui,
@@ -626,7 +599,7 @@ Description: Debian Science Engineering packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Engineering.
.
- Please not that there is an additional package engineering-dev
+ Please note that there is an additional package engineering-dev
which depends from packages which are useful to develop engineering
related software.
@@ -640,11 +613,13 @@ Recommends: code-saturne-bin,
libalberta2-dev,
libann-dev,
libbox-dev,
+ libceres-dev,
libcgns-dev,
libcoin80-dev,
libdeal.ii-dev,
libdime-dev,
libdxflib-dev,
+ libelmer-dev,
libexodusii-dev,
libfeel++-dev,
libflann-dev,
@@ -664,20 +639,25 @@ Recommends: code-saturne-bin,
liboce-ocaf-dev,
liboce-visualization-dev,
libopenturns-dev,
+ libplb-dev,
libsilo-dev,
+ libsis-jhdf5-java,
libslepc3.4.2-dev,
libslicot-dev,
libug-dev,
libxdmf-dev,
python-collada,
python-netcdf,
+ python-pynfft | python3-pynfft,
r-cran-rnetcdf,
syfi-dev
-Suggests: libdiet-admin2.8-dev,
+Suggests: calculix-ccx-doc,
+ calculix-ccx-test,
+ ceres-solver-doc,
+ libdiet-admin2.8-dev,
libdiet-client2.8-dev,
libdiet-dagda2.8-dev,
libdiet-sed2.8-dev,
- libelmer-dev,
libgtkdatabox-0.9.2-0-dev,
libgtkdataboxmm-dev,
libluminate-dev,
@@ -689,9 +669,7 @@ Suggests: libdiet-admin2.8-dev,
openturns-examples,
pycgns,
python-fftw3,
- python-nfft3,
python3-fftw3,
- python3-nfft3,
salome-kernel-dev
Description: Debian Science Engineering-dev packages
This metapackage will install Debian Science packages which might be
@@ -713,6 +691,7 @@ Recommends: r-cran-fasianoptions,
r-cran-fgarch,
r-cran-fimport,
r-cran-fmultivar,
+ r-cran-fnonlinear,
r-cran-foptions,
r-cran-fportfolio,
r-cran-fregression,
@@ -720,7 +699,6 @@ Recommends: r-cran-fasianoptions,
r-cran-funitroots,
r-cran-timedate,
r-cran-timeseries
-Suggests: r-cran-fnonlinear
Description: Debian Science financial engineering and computational finance
This metapackage will install Debian Science packages for financial
engineering and computational finance.
@@ -757,7 +735,6 @@ Recommends: avce00,
osm2pgsql,
osmpbf-bin,
pgadmin3,
- php5-mapscript,
phppgadmin,
postgis,
proj-bin,
@@ -777,6 +754,7 @@ Suggests: drawmap,
gpsdrive,
grace6,
openjump,
+ php5-mapscript,
sumo
Description: Debian Science Geography packages
This metapackage will install Debian Science packages related to
@@ -789,9 +767,9 @@ Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: carmetal,
+ drgeo,
geogebra-kde
-Suggests: drgeo,
- libcgal-dev,
+Suggests: libcgal-dev,
libgeometry-primitive-perl,
libmath-geometry-voronoi-perl,
octave-geometry,
@@ -818,7 +796,6 @@ Recommends: cernlib,
kuipc,
kxterm,
libroot-bindings-python5.34,
- libroot-bindings-ruby5.34,
libroot-core5.34,
libroot-geom5.34,
libroot-graf2d-gpad5.34,
@@ -911,6 +888,7 @@ Recommends: cernlib,
Suggests: geant321-doc,
geant4,
lhapdf-pdfsets-minimal,
+ libroot-bindings-ruby5.34,
libroot-proof-clarens5.34,
paw-demos,
root-plugin-proof-peac,
@@ -945,7 +923,6 @@ Recommends: cernlib-base-dev,
libpythia8-dev,
librivet-dev,
libroot-bindings-python-dev,
- libroot-bindings-ruby-dev,
libroot-core-dev,
libroot-geom-dev,
libroot-graf2d-gpad-dev,
@@ -993,13 +970,15 @@ Recommends: cernlib-base-dev,
libsiscone-spherical-dev,
libthepeg-dev,
rivet-plugins-dev
-Suggests: clhep-doc,
+Suggests: ckon,
+ clhep-doc,
fastjet-doc,
fastjet-examples,
hepmc-examples,
hepmc-reference-manual,
hepmc-user-manual,
lhapdf-ccwrap-doc,
+ libroot-bindings-ruby-dev,
libroot-proof-clarens-dev,
pythia8-doc-html,
pythia8-doc-worksheet,
@@ -1027,14 +1006,9 @@ Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version
Recommends: gpiv,
gpivtools,
gwyddion,
- libcv-dev,
+ limereg,
teem-apps
-Suggests: cimg-dev,
- libsimage-dev,
- libvigraimpex-dev,
- libvisad-java,
- libvlfeat-dev,
- python-vigra,
+Suggests: python-imageio,
scilab-sivp
Description: Debian Science image analysis packages
This metapackage will install Debian Science packages related to
@@ -1042,15 +1016,36 @@ Description: Debian Science image analysis packages
sciences (as for instance science-dataacquisition, science-viewing
and science-typesetting).
+Package: science-imageanalysis-dev
+Section: metapackages
+Architecture: all
+Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
+Recommends: cimg-dev,
+ libcv-dev,
+ liblimereg-dev,
+ libsimage-dev,
+ libvigraimpex-dev,
+ libvlfeat-dev,
+ python-vigra
+Suggests: libfreeimage-dev,
+ libvisad-java,
+ python-imageio
+Description: Debian Science development of image analysis applications
+ This metapackage will install Debian Science development libraries to
+ develop scientific image analysis applications acquisitions.
+
Package: science-linguistics
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: apertium,
+ apertium-lex-tools,
artha,
+ cg3,
collatinus,
dimbl,
frog,
+ libcld2-dev,
link-grammar,
mbt,
mbtserver,
@@ -1058,7 +1053,9 @@ Recommends: apertium,
timblserver,
ucto,
wordnet
-Suggests: frogdata,
+Suggests: apertium-af-nl,
+ frogdata,
+ libcg3-dev,
libfolia-dev,
libmbt0-dev,
libticcutils2-dev,
@@ -1126,6 +1123,7 @@ Recommends: autoclass,
libroot-math-mlp-dev,
libroot-montecarlo-vmc-dev,
libroot-tmva-dev,
+ libshark-dev,
libshogun-dev,
libsvm-dev,
libtorch3-dev,
@@ -1141,7 +1139,6 @@ Recommends: autoclass,
python-opencv,
python-pebl,
python-pyevolve,
- python-pyke,
python-pymc,
python-scikits-learn,
python-statsmodels,
@@ -1165,8 +1162,8 @@ Suggests: ask,
flann,
libacovea-dev,
libcomplearn-dev,
+ libdlib-dev,
libqsearch-dev,
- libshark-dev,
lua-torch5,
pybrain,
python-orange,
@@ -1183,7 +1180,9 @@ Package: science-mathematics
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: agda,
+Recommends: 4ti2,
+ agda,
+ auto-07p,
axiom,
bliss,
coinor-symphony,
@@ -1196,18 +1195,23 @@ Recommends: agda,
freefem++,
freefem3d,
freemat,
+ frobby,
gap,
gap-character-tables,
gap-float,
+ gap-grape,
gap-guava,
+ gap-openmath,
gap-prim-groups,
gap-small-groups,
gap-small-groups-extra,
gap-table-of-marks,
gap-trans-groups,
+ geneagrapher,
geogebra,
geomview,
gerris,
+ getdp,
ginac-tools,
gmsh,
hol-light,
@@ -1215,11 +1219,14 @@ Recommends: agda,
libmatheval1,
lp-solve,
lrslib,
+ mathicgb,
mathomatic,
matita,
mcl,
minisat,
mumps-test,
+ nauty,
+ netgen,
octave,
pari-gp,
polybori,
@@ -1232,42 +1239,45 @@ Recommends: agda,
python-minieigen,
python-openturns,
qhull-bin,
- qtoctave,
+ qsopt-ex,
regina-normal,
rheolef,
sagemath-database-conway-polynomials,
science-statistics,
scilab,
scilab-ann,
+ scilab-sivp,
scotch,
sfc,
+ singular,
snappea,
tetgen,
wxmaxima,
xmaxima,
- xmds,
xmds2
Suggests: ann-tools,
cliquer,
eprover,
gap-gapdoc,
+ gap-io,
gap-online-help,
- getdp,
+ gap-scscp,
+ gmp-ecm,
isabelle,
kseg,
magnus,
matlab-support,
- nauty,
- netgen,
netgen-doc,
octaviz,
pari-extra,
+ primesieve,
proofgeneral-coq,
+ qtoctave,
r-cran-evd,
sagemath,
scilab-scimax,
- scilab-sivp,
- scilab-swt
+ scilab-swt,
+ xmds
Description: Debian Science Mathematics packages
This metapackage will install Debian Science packages related to
Mathematics. You might also be interested in the field::mathematics
@@ -1307,6 +1317,7 @@ Recommends: code-saturne-bin,
libflann-dev,
libfreefem++-dev,
libfreefem-dev,
+ libfrobby-dev,
libgivaro-dev,
libglpk-dev,
libglpk-java,
@@ -1321,13 +1332,19 @@ Recommends: code-saturne-bin,
liblip-dev,
libmadlib-dev,
libmatheval-dev,
+ libmathic-dev,
+ libmathicgb-dev,
libmatio-dev,
+ libmpfi-dev,
libmpfrc++-dev,
libmuparser-dev,
+ libnauty2-dev,
libnewmat10-dev,
libnfft3-dev,
+ libnglib-dev,
libopenblas-dev,
libopenturns-dev,
+ libplb-dev,
libpolybori-dev,
libpolybori-groebner-dev,
libqcustomplot-dev,
@@ -1349,14 +1366,19 @@ Recommends: code-saturne-bin,
minpack-dev,
petsc-dev,
python-dolfin,
+ python-dtcwt | python3-dtcwt,
python-ferari,
python-ffc,
+ python-glpk,
python-linop | python3-linop,
python-numexpr | python3-numexpr,
python-numpy,
python-openopt,
python-openturns,
python-polybori,
+ python-pyfftw | python3-pyfftw,
+ python-pynfft | python3-pynfft,
+ python-pyoperators | python3-pyoperators,
python-pyviennacl,
python-ufc,
python-ufl,
@@ -1369,6 +1391,7 @@ Suggests: cfortran,
fflas-ffpack-user-doc,
givaro-dev-doc,
givaro-user-doc,
+ jsurf-alggeo,
libcliquer-dev,
libdune-istl-dev,
libdune-localfunctions-dev,
@@ -1378,24 +1401,19 @@ Suggests: cfortran,
liblrs-dev,
libmesh-dev,
libmtj-java,
- libnauty-dev,
libnetlib-java,
- libnglib-dev,
libntl-dev,
libparmetis-dev,
+ libprimesieve5-dev,
libqrupdate-dev,
libsuitesparse-metis-dev,
+ libtestu01-0-dev,
libtet1.4-dev,
libtet1.4.2-dev,
libtrilinos-dev,
openturns-examples,
python-fftw3,
- python-glpk,
- python-pynfft,
- python-pyoperators,
- python3-fftw3,
- python3-pynfft,
- python3-pyoperators
+ python3-fftw3
Description: Debian Science Mathematics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
@@ -1496,7 +1514,6 @@ Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: abinit,
avogadro,
- axiom,
cadabra,
cbflib-bin,
cp2k,
@@ -1507,7 +1524,9 @@ Recommends: abinit,
garlic,
gdis,
ggobi,
- gnuplot,
+ ghemical,
+ gnuplot | gnuplot5,
+ gpaw,
gperiodic,
grace,
graphviz,
@@ -1517,60 +1536,65 @@ Recommends: abinit,
libfftw3-3,
libgsl0ldbl,
liblapack3,
- maxima,
mayavi2,
mpqc,
nco,
ncview,
netcdf-bin,
- netcdf-doc,
openmpi-bin | mpich,
openmx,
psi3,
- pymca,
+ python-ase,
python-lmfit | python3-lmfit,
python-scientific,
python-scipy,
python-scitools,
python-sympy,
pyxplot,
- qtoctave,
quantum-espresso,
science-numericalcomputation,
- udav
+ scilab,
+ scilab-sivp,
+ udav,
+ v-sim
Suggests: ape,
atompaw,
+ axiom,
bigdft,
- crystfel,
dx,
dx-doc,
- espresso++,
+ dxsamples,
exciting,
extrema,
fdmnes,
feel++-apps,
- ghemical,
- gmsh,
- gpaw,
gpiv,
gpivtools,
+ hdf5-helpers,
+ hdf5-tools,
horae,
ifeffit,
libblacs-mpi1,
+ libgraphviz-perl,
+ liblevmar-2-6,
libscalapack-mpi1,
+ libxc,
+ maxima,
+ netcdf-doc,
octaviz,
octopus,
- openmpi-doc | mpich-doc | lam-mpidoc,
- python-ase,
+ openmpi-doc | mpich-doc,
+ pymca,
python-elemental,
+ python-pygraphviz,
qtiplot,
+ qtoctave,
scidavis,
science-mathematics,
science-statistics,
- scilab-sivp,
sixpack,
- v-sim,
- wannier90
+ wannier90-1,
+ wannier90-2
Description: Debian Science Nanoscale Physics packages
This metapackage will install Debian Science packages related to
Nanoscale Physics, which corresponds to the study of physical systems
@@ -1595,16 +1619,17 @@ Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: abinit-doc,
- fftw-dev,
gsl-bin,
libblacs-mpi-dev,
libblas-dev,
libblas-doc,
libcbf-dev,
+ libclipper-dev,
libetsf-io-dev,
libetsf-io-doc,
libfftw3-dev,
libgsl0-dev,
+ libhdf5-dev,
liblapack-dev,
liblapack-doc,
libnetcdf-dev,
@@ -1615,6 +1640,7 @@ Recommends: abinit-doc,
libroot-montecarlo-vmc-dev,
libroot-tmva-dev,
libscalapack-mpi-dev,
+ libsis-jhdf5-java,
libssm-dev,
libxc-dev,
netcdf-doc,
@@ -1623,8 +1649,7 @@ Recommends: abinit-doc,
r-cran-rnetcdf,
root-system,
scalapack-doc,
- science-mathematics-dev,
- sfftw-dev
+ science-mathematics-dev
Suggests: crystfel-dev,
gsl-doc-info,
gsl-doc-pdf,
@@ -1632,17 +1657,13 @@ Suggests: crystfel-dev,
gsl-ref-psdoc,
libfeel++-dev,
libfftw3-doc,
- libfox95,
- libnbc,
- libpspio,
- libtrilinos-dev,
- libtrilinos-doc,
- libxc,
+ libpspio-dev,
oce-draw,
+ python-h5py,
python-netcdf,
python-xrayutilities,
spglib,
- wannier90-dev
+ wannier90-1-dev
Description: Debian Science Nanoscale Physics development packages
This metapackage will install Debian Science packages which might be
helpful for the development of applications for Nanoscale Physics.
@@ -1656,7 +1677,6 @@ Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: amide,
- caret,
dicom3tools,
dicomnifti,
fslview,
@@ -1666,22 +1686,27 @@ Recommends: amide,
mriconvert,
mricron,
nifti-bin,
+ nifti2dicom,
+ openmeeg-tools,
praat,
psignifit,
python-dicom,
python-dipy,
python-mvpa2,
python-nibabel,
+ python-nipy,
+ python-nipype,
python-nitime,
python-pyepl,
- python-pypsignifit,
python-pyxnat,
python-statsmodels,
+ qnifti2dicom,
voxbo,
xmedcon
Suggests: afni,
bioimagesuite,
brainvisa,
+ caret,
connectomeviewer,
debruijn,
eeglab,
@@ -1693,11 +1718,9 @@ Suggests: afni,
lipsia,
mni-autoreg,
mni-n3,
- openmeeg-tools,
openwalnut-qt4,
pysurfer,
- python-nipy,
- python-nipype,
+ python-pypsignifit,
science-psychophysics,
science-typesetting,
slicer,
@@ -1746,23 +1769,34 @@ Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: admesh,
algotutor,
+ calculix-ccx,
coinor-clp,
coinor-symphony,
esys-particle,
freemat,
gnudatalanguage,
+ iep,
ipython,
julia,
lammps,
libadolc-dev,
+ libarrayfire-unified-dev,
+ libceres-dev,
+ libclblas-dev,
+ libclfft-dev,
libcolpack-dev,
+ libcompute-dev,
libdune-grid-dev,
+ libopengm-dev,
+ libqsopt-ex-dev,
libsuitesparse-dev,
liggghts,
lush,
metis,
octave,
pdl,
+ python-arrayfire | python3-arrayfire,
+ python-bitstring | python3-bitstring,
python-csa,
python-deap,
python-demgengeo,
@@ -1773,16 +1807,22 @@ Recommends: admesh,
python-numpy,
python-scipy,
python-scitools,
+ python-sfepy,
python-tables | python3-tables,
- qtoctave,
+ python3-woo | python-woo,
+ qsopt-ex,
r-base,
scilab,
scilab-ann,
+ scilab-sivp,
spyder,
vitables,
yade,
yorick
-Suggests: hpcc,
+Suggests: ceres-solver-doc,
+ easea,
+ geneva,
+ hpcc,
libcneartree-dev,
libquantum-dev,
libscirenderer-java,
@@ -1792,11 +1832,12 @@ Suggests: hpcc,
metis-edf,
octave-sundials,
octavede,
+ pysph,
python-sciscipy,
+ qtoctave,
scilab-jims,
scilab-metanet,
scilab-scimax,
- scilab-sivp,
scilab-swt
Description: Debian Science Numerical Computation packages
This metapackage will install Debian Science packages useful for
@@ -1822,6 +1863,7 @@ Recommends: abinit | mpqc | openmx | psi3,
geant321,
gerris,
ghkl,
+ gpaw,
gpiv,
gpivtools,
gwyddion,
@@ -1841,7 +1883,8 @@ Recommends: abinit | mpqc | openmx | psi3,
root-system,
science-electronics,
science-numericalcomputation,
- tessa | tessa-mpi
+ tessa | tessa-mpi,
+ v-sim
Suggests: blzpack,
clhep,
espresso++,
@@ -1860,8 +1903,7 @@ Suggests: blzpack,
science-statistics,
scilab-sivp,
sixpack,
- spis,
- v-sim
+ spis
Description: Debian Science Physics packages
This metapackage will install Debian Science packages related to Physics.
You might also be interested in the debtag field::physics and, depending on
@@ -1872,23 +1914,24 @@ Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: fftw-dev,
+ libasl-dev,
libfeel++-dev,
libfftw3-dev,
libfreefoam-dev,
libnfft3-dev,
libopenctm-dev,
+ libplb-dev,
pyfai,
python-multipletau | python3-multipletau,
python-openctm,
+ python-pyfftw | python3-pyfftw,
+ python-pynfft | python3-pynfft,
python-quantities,
sfftw-dev
-Suggests: libismrmrd-dev,
- libtriangle-dev,
+Suggests: libtriangle-dev,
python-fftw3,
- python-pynfft,
python-xrayutilities,
- python3-fftw3,
- python3-pynfft
+ python3-fftw3
Description: Debian Science Physics-dev packages
This metapackage will install Debian Science packages which might be
helpful for development of applications for Mathematics.
@@ -1899,9 +1942,9 @@ Package: science-presentation
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: latex-beamer,
- pdf-presenter-console,
+Recommends: pdf-presenter-console,
zathura
+Suggests: latex-beamer
Description: Debian Science generic tools for presentations
This metapackage will install Debian Science some packages which are
useful for doing presentations for instance on scientific conferences.
@@ -1912,6 +1955,7 @@ Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
Recommends: libfreenect-dev,
octave-psychtoolbox-3,
+ psychopy,
python-pyepl,
python-pyoptical
Suggests: debruijn,
@@ -1919,7 +1963,6 @@ Suggests: debruijn,
opensesame,
pebl,
psychlops,
- psychopy,
psytoolkit,
python-pyxid,
science-bci,
@@ -1947,11 +1990,18 @@ Recommends: choreonoid,
morse-simulator,
octomap-tools,
octovis,
- xenomai-runtime
+ python-rosclean,
+ python-roscreate,
+ python-rosmake,
+ python-rosunit,
+ ros-mk,
+ rosbash,
+ rosbuild,
+ roslang
Suggests: arduino-mk,
d-collide,
- gazebo,
- gnuplot,
+ gazebo5,
+ gnuplot | gnuplot5,
libcoin60-runtime,
libvtk5.4,
octave,
@@ -1967,10 +2017,10 @@ Suggests: arduino-mk,
pcl,
roboop,
robot-player,
- ros,
rtai,
rtnet,
- solid
+ solid,
+ xenomai-runtime
Description: Debian Robotics packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages related to Robotics.
@@ -1986,18 +2036,22 @@ Recommends: libccd-dev,
libcomedi-dev,
libconsole-bridge-dev,
libcv-dev,
+ libignition-math2-dev,
+ libignition-transport-dev,
liboctomap-dev,
libode-dev,
libompl-dev,
libopenigtlink-dev,
libroboptim-core-dev,
- libsdformat-dev,
+ libsimbody-dev,
libslicot-dev,
liburdfdom-dev,
liburdfdom-headers-dev,
libvisp-dev,
python-comedilib
-Suggests: visp-images-data
+Suggests: libgazebo5-dev,
+ libsdformat-dev,
+ visp-images-data
Description: Debian Robotics development packages
This metapackage is part of the Debian Pure Blend "Debian Science"
and installs packages that are relevant to develop applications
@@ -2007,17 +2061,24 @@ Package: science-simulations
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: esys-particle,
+Recommends: calculix-ccx,
+ esys-particle,
freefoam,
+ getdp,
lammps,
+ libceres-dev,
liggghts,
music-bin,
python-deap,
+ python-sfepy,
+ python3-woo | python-woo,
+ radiance,
sumo,
yade
-Suggests: fdmnes,
- getdp,
- radiance
+Suggests: ceres-solver-doc,
+ fdmnes,
+ libopensurgsim-dev,
+ pysph
Description: Debian Science Simulation packages
This metapackage will install Debian Science packages that are
used to do simulations in different fields of science.
@@ -2035,7 +2096,8 @@ Package: science-statistics
Section: metapackages
Architecture: all
Depends: science-tasks (= ${binary:Version}), science-config (= ${binary:Version})
-Recommends: ess,
+Recommends: apophenia-bin,
+ ess,
littler,
psignifit,
python-openturns,
@@ -2044,8 +2106,11 @@ Recommends: ess,
python-statsmodels,
r-cran-abind,
r-cran-acepack,
+ r-cran-afex,
r-cran-amore,
+ r-cran-bayesfactor,
r-cran-bayesm,
+ r-cran-bms,
r-cran-boot,
r-cran-cairodevice,
r-cran-car,
@@ -2053,13 +2118,19 @@ Recommends: ess,
r-cran-cluster,
r-cran-coda,
r-cran-codetools,
+ r-cran-coin,
+ r-cran-contfrac,
+ r-cran-conting,
r-cran-date,
r-cran-dbi,
r-cran-deldir,
+ r-cran-desolve,
r-cran-eco,
r-cran-ecodist,
r-cran-effects,
+ r-cran-elliptic,
r-cran-energy,
+ r-cran-estimability,
r-cran-expm,
r-cran-fastcluster,
r-cran-fbasics,
@@ -2076,6 +2147,7 @@ Recommends: ess,
r-cran-gtools,
r-cran-hdf5,
r-cran-hmisc,
+ r-cran-hypergeo,
r-cran-its,
r-cran-kernsmooth,
r-cran-lattice,
@@ -2083,6 +2155,8 @@ Recommends: ess,
r-cran-lhs,
r-cran-lme4,
r-cran-lmtest,
+ r-cran-logspline,
+ r-cran-lsmeans,
r-cran-mapdata,
r-cran-mapproj,
r-cran-maps,
@@ -2093,11 +2167,14 @@ Recommends: ess,
r-cran-mgcv,
r-cran-misc3d,
r-cran-mnp,
+ r-cran-modeltools,
r-cran-msm,
r-cran-multcomp,
r-cran-mvnormtest,
r-cran-mvtnorm,
r-cran-nlme,
+ r-cran-pbapply,
+ r-cran-pbivnorm,
r-cran-permute,
r-cran-pscl,
r-cran-psy,
@@ -2105,19 +2182,23 @@ Recommends: ess,
r-cran-quadprog,
r-cran-rcmdr,
r-cran-relimp,
+ r-cran-rggobi,
r-cran-rgl,
r-cran-rgtk2,
+ r-cran-rinside,
r-cran-rmpi,
r-cran-rms,
r-cran-rmysql,
r-cran-rodbc,
r-cran-rpart,
r-cran-rquantlib,
+ r-cran-rsdmx,
r-cran-rserve,
r-cran-rsprng,
r-cran-sandwich,
r-cran-sm,
r-cran-snow,
+ r-cran-spam,
r-cran-spatstat,
r-cran-statmod,
r-cran-strucchange,
@@ -2127,19 +2208,30 @@ Recommends: ess,
r-cran-tkrplot,
r-cran-tseries,
r-cran-vcd,
+ r-cran-vcdextra,
r-cran-vgam,
r-cran-xml,
r-cran-zelig,
r-cran-zoo,
r-recommended,
rkward
-Suggests: libtamuanova-dev,
+Suggests: libapophenia2-dev,
+ libtamuanova-dev,
python-stats,
+ r-cran-blockmodeling,
+ r-cran-catools,
+ r-cran-fastmatch,
r-cran-fcalendar,
r-cran-fecofin,
- r-cran-rggobi,
+ r-cran-futile.logger,
+ r-cran-futile.options,
+ r-cran-igraph,
+ r-cran-lambda.r,
+ r-cran-magrittr,
+ r-cran-nnls,
+ r-cran-r.oo,
+ r-cran-r.utils,
r-cran-rpvm,
- r-cran-spam,
r-cran-spc,
rstudio,
science-mathematics
@@ -2163,6 +2255,7 @@ Recommends: auctex,
dia,
diploma,
feynmf,
+ gummi,
impose+,
ipe,
ipe5toxml,
@@ -2215,7 +2308,7 @@ Recommends: 3depict,
gle-graphics,
gmsh,
gnudatalanguage,
- gnuplot,
+ gnuplot | gnuplot5,
grace,
graphviz,
gri,
@@ -2235,12 +2328,14 @@ Recommends: 3depict,
plotdrop,
python-gnuplot,
python-guiqwt,
+ python-matplotlib-venn | python3-matplotlib-venn,
python-pyqtgraph,
python-scientific,
python-seaborn,
python-viper,
pyxplot,
qtiplot,
+ scidavis,
trend,
udav,
veusz,
@@ -2253,6 +2348,7 @@ Suggests: cassandra,
jeuclid-mathviewer,
labplot,
libcoin80-dev,
+ libgrits-dev,
libgtkmathview-bin,
libpuzzle-bin,
libqglviewer-dev,
@@ -2274,11 +2370,12 @@ Suggests: cassandra,
r-cran-plotrix,
r-cran-scales,
r-cran-scatterplot3d,
- scidavis,
+ r-cran-vioplot,
tcl-vtk,
texlive-pictures,
visit,
- vtk-examples
+ vtk-examples,
+ worldwind
Description: Debian Science data visualisation packages
This metapackage will install Debian Science packages related to data
visualization. You might also be interested in the use::viewing
@@ -2306,6 +2403,7 @@ Recommends: gnudatalanguage,
libvtk5-dev,
libvtk5-qt4-dev,
libvtk6-dev,
+ libvtk6-java,
pdl,
python-gnuplot,
python-matplotlib,
@@ -2320,7 +2418,7 @@ Recommends: gnudatalanguage,
python3-skimage-lib,
tcl-vtk,
vtk-examples
-Suggests: libvtk6-java
+Suggests: python-gnuplotlib
Description: Debian Science development of visualisation applications
This metapackage will install Debian Science packages related to the
development of applications to visualise scientific data.
--
Debian Science Blend
More information about the Blends-commit
mailing list