[Blends-commit] [SCM] med branch, master, updated. 68e8f81695b3ec0957b9d712c1dac1f2fef5e71c

[Andreas Tille]

The following commit has been merged in the master branch:
commit 68e8f81695b3ec0957b9d712c1dac1f2fef5e71c
Author: Andreas Tille <tille at debian.org>
Date:   Thu Dec 22 15:02:54 2016 +0100

    Add several packages maintained by the Debian Med team that remained uncategorized

diff --git a/tasks/bio b/tasks/bio
index 45801a7..f2deab7 100644
--- a/tasks/bio
+++ b/tasks/bio
@@ -351,6 +351,8 @@ Depends: ncl-tools
 
 Suggests: science-workflow
 
+Depends: libvcflib-tools
+
 X-Mark: Prospective packages are starting here
 
 X-Mark: Packages in Vcs - Information about these is queried from UDD as well
@@ -798,12 +800,24 @@ Depends: r-bioc-rtracklayer, r-bioc-gviz, r-bioc-biostrings, r-bioc-annotate, r-
 
 Depends: r-bioc-deseq2, r-bioc-dnacopy, r-bioc-geneplotter
 
+Depends: r-bioc-mergeomics
+
+Depends: r-bioc-metagenomeseq, r-bioc-phyloseq
+
 Depends: r-bioc-ebseq
 
 Depends: r-bioc-limma, r-bioc-edger
 
 Suggests: r-bioc-annotationhub, r-bioc-aroma.light, r-bioc-ensembldb, r-bioc-go.db
 
+Suggests: r-bioc-savr
+
+Suggests: r-cran-qqman
+
+Depends: r-cran-rotl
+
+Suggests: r-cran-rentrez
+
 Depends: r-cran-adegenet, r-cran-adephylo
 
 Depends: r-cran-distory
diff --git a/tasks/bio-dev b/tasks/bio-dev
index 7de0d83..09292ee 100644
--- a/tasks/bio-dev
+++ b/tasks/bio-dev
@@ -113,6 +113,7 @@ Suggests: r-bioc-affy,
           r-bioc-annotationdbi,
           r-bioc-biocgenerics,
           r-bioc-biomart,
+          r-bioc-biomformat,
           r-bioc-biovizbase,
           r-bioc-bsgenome,
           r-bioc-genomeinfodb,
@@ -124,12 +125,17 @@ Suggests: r-bioc-affy,
           r-bioc-iranges,
           r-bioc-makecdfenv,
           r-bioc-preprocesscore,
+          r-bioc-rbgl,
           r-bioc-rsamtools,
           r-bioc-shortread,
           r-bioc-snpstats,
           r-bioc-variantannotation,
           r-bioc-xvector
 
+Suggests: r-cran-rentrez
+
+Suggests: ruby-rgfa
+
 Depends: r-bioc-biobase
 Remark: This is a part of Bioconductor project
  A nice overview about all modules of BioDonductor is given at
@@ -338,3 +344,7 @@ Depends: libssw-dev, libssw-java
 Depends: libfml-dev
 
 Depends: libgkarrays-dev
+
+Depends: libjloda-java
+
+Depends: libvcflib-dev
diff --git a/tasks/imaging b/tasks/imaging
index 67370f9..c6a4f44 100644
--- a/tasks/imaging
+++ b/tasks/imaging
@@ -888,3 +888,5 @@ Depends: fw4spl
 Depends: bart
 
 Suggests: science-workflow
+
+Depends: dcm2niix
diff --git a/tasks/tools b/tasks/tools
index 4eec622..8658025 100644
--- a/tasks/tools
+++ b/tasks/tools
@@ -37,6 +37,8 @@ Depends: cronometer
 
 Depends: python-fitbit
 
+Depends: r-cran-fitcoach
+
 Depends: r-cran-fitbitscraper
 
 Depends: galileo
@@ -46,6 +48,5 @@ Suggests: goldencheetah
 Depends: nut-nutrition
 
 Depends: nutsqlite
-WNPP: 841178
 
 Suggests: sleepyhead
diff --git a/tasks/typesetting b/tasks/typesetting
index fd195f5..7ef3e8c 100644
--- a/tasks/typesetting
+++ b/tasks/typesetting
@@ -34,3 +34,5 @@ Remark:
  PDF collections. This list is probably incomplete.
 
 Depends: king
+
+Suggests: r-cran-qqman

-- 
Debian Med metapackages