[Blends-commit] [SCM] med branch, master, updated. 8a7f83a9b55c0429cf19ea58143812ea91638990
Andreas Tille
tille at debian.org
Thu Jul 28 08:45:57 UTC 2016
The following commit has been merged in the master branch:
commit 8a7f83a9b55c0429cf19ea58143812ea91638990
Author: Andreas Tille <tille at debian.org>
Date: Thu Jul 28 10:45:33 2016 +0200
Add some not yet categorised packages
diff --git a/tasks/bio b/tasks/bio
index 21706fb..5518230 100644
--- a/tasks/bio
+++ b/tasks/bio
@@ -676,6 +676,8 @@ Depends: pbgenomicconsensus
Depends: pbjelly, pbhoney
+Depends: pbh5tools
+
Depends: pbsim
Depends: pcma
@@ -748,10 +750,14 @@ Depends: rambo-k
Depends: r-bioc-rtracklayer, r-bioc-gviz, r-bioc-biostrings, r-bioc-annotate, r-bioc-genefilter
+Depends: r-bioc-deseq2, r-bioc-dnacopy, r-bioc-geneplotter
+
Depends: r-bioc-ebseq
Depends: r-bioc-limma, r-bioc-edger
+Suggests: r-bioc-annotationhub, r-bioc-aroma.light, r-bioc-ensembldb, r-bioc-go.db
+
Depends: r-cran-phangorn
Depends: r-cran-metamix
@@ -762,7 +768,7 @@ Depends: r-cran-seqinr
Depends: r-cran-vegan
-Suggests: r-bioc-aroma.light
+Suggests: r-cran-pheatmap
Depends: relion-bin+gui | relion-bin+mpi+gui, relion-bin | relion-bin+mpi
@@ -827,6 +833,8 @@ Remark: This can be regarded as successor of ssaha2
Depends: smithwaterman
+Depends: ssw-align
+
Depends: smrtanalysis
Depends: snpeff
diff --git a/tasks/bio-dev b/tasks/bio-dev
index 0f963a0..4230fc6 100644
--- a/tasks/bio-dev
+++ b/tasks/bio-dev
@@ -321,3 +321,7 @@ Depends: libsmithwaterman-dev
Depends: libfastahack-dev
Depends: mgltools-networkeditor, mgltools-vision, mgltools-pybabel
+
+Suggests: libdisorder-dev
+
+Depends: libssw-dev, libssw-java
--
Debian Med metapackages
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